TomoSeq data search

Data search

Results for MligTC455_50878

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_50878

1154

24.04

Mlig455_012775, Mlig455_012783

Neo: -

Age: -

NCK2

Mlig455_012775 {REF} {Length: 3281} {TRANSSPLICED} {Pfam: SH3 domain [PF00018.30, score=136.1]; Variant SH3 domain [PF14604.8, score=119.6]; Variant SH3 domain [PF07653.19, score=87.6]; SH2 domain [PF00017.26, score=57.8]; Bacterial SH3 domain [PF08239.13, score=31.8]; SH3 domain [PF17902.3, score=31.7]} {Human: ENSG00000071051, NCK2, NCK adaptor protein 2, [RH, Score=249, Expect=4e-78]; ENSG00000158092, NCK1, NCK adaptor protein 1, [RH, Score=238, Expect=6e-74]} {Mouse: ENSMUSG00000066877, Nck2, non-catalytic region of tyrosine kinase adaptor protein 2, [RH, Score=241, Expect=4e-75]; ENSMUSG00000032475, Nck1, non-catalytic region of tyrosine kinase adaptor protein 1, [RH, Score=238, Expect=6e-74]} {Dmel: FBgn0010583, dock, dreadlocks, [RH, Score=226, Expect=7e-68]} {Celegans: WBGene00006410, nck-1, NCK (Non-Catalytic region of tyrosine Kinase) adaptor protein family, [RH, Score=246, Expect=3e-77]} {Smed: dd_Smed_v6_4816_0_1, dd_Smed_v6_4816_0_1, [RH, Score=250, Expect=2e-76]} {RNA1509_14401, RNA1509_27778} {RNA1310_13092.1, RNA1509_14401, RNA1509_27778} {RNA1509_14401, RNA1509_27778, RNA815_9153}

Mlig455_012783 {REF} {Length: 3682} {TRANSSPLICED} {Pfam: SH3 domain [PF00018.30, score=137.4]; Variant SH3 domain [PF14604.8, score=120.1]; Variant SH3 domain [PF07653.19, score=86.3]; SH2 domain [PF00017.26, score=57.8]; SH3 domain [PF17902.3, score=32.8]; Bacterial SH3 domain [PF08239.13, score=32.7]} {Human: ENSG00000071051, NCK2, NCK adaptor protein 2, [RH, Score=251, Expect=5e-79]} {Mouse: ENSMUSG00000066877, Nck2, non-catalytic region of tyrosine kinase adaptor protein 2, [RH, Score=243, Expect=6e-76]; ENSMUSG00000032475, Nck1, non-catalytic region of tyrosine kinase adaptor protein 1, [RH, Score=238, Expect=5e-74]} {Dmel: FBgn0010583, dock, dreadlocks, [RH, Score=228, Expect=9e-69]} {Celegans: WBGene00006410, nck-1, NCK (Non-Catalytic region of tyrosine Kinase) adaptor protein family, [RH, Score=245, Expect=6e-77]} {Smed: dd_Smed_v6_4816_0_1, dd_Smed_v6_4816_0_1, [RH, Score=250, Expect=2e-76]} {RNA1509_27778} {RNA1310_13092.1} {RNA815_9153}

Cumulative graph for MligTC455_50878

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.117	4.828	0.87957	1.00000
RegionR2	0.119	4.828	0.77459	1.00000
RegionR3	-0.435	4.828	0.22336	0.76479
RegionR4	-0.126	4.828	0.75948	1.00000
RegionR5	0.296	4.828	0.34658	0.69534
RegionR6	-0.068	4.828	0.84393	1.00000
RegionR7	0.17	4.828	0.66260	1.00000
RegionR8	-0.072	4.828	0.88122	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-8.067	4.828	0.01538	0.52225
RegenerationR2	-0.188	4.828	0.62582	0.92523
RegenerationR3	-0.086	4.828	0.83890	0.99389
RegenerationR4	0.054	4.828	0.90083	1.00000
RegenerationR5	-0.419	4.828	0.28002	0.70937
RegenerationR6	-0.396	4.828	0.35677	0.70155
RegenerationBL	-0.496	4.828	0.28276	0.64381
RegenerationTP	-0.413	4.828	0.39681	0.82711

Genes with expression patterns similar to MligTC455_50878

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_50878	1154	24.04	Mlig455_012775, Mlig455_012783	Neo: - Age: -	NCK2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_012775 {REF} {Length: 3281} {TRANSSPLICED} {Pfam: SH3 domain [PF00018.30, score=136.1]; Variant SH3 domain [PF14604.8, score=119.6]; Variant SH3 domain [PF07653.19, score=87.6]; SH2 domain [PF00017.26, score=57.8]; Bacterial SH3 domain [PF08239.13, score=31.8]; SH3 domain [PF17902.3, score=31.7]} {Human: ENSG00000071051, NCK2, NCK adaptor protein 2, [RH, Score=249, Expect=4e-78]; ENSG00000158092, NCK1, NCK adaptor protein 1, [RH, Score=238, Expect=6e-74]} {Mouse: ENSMUSG00000066877, Nck2, non-catalytic region of tyrosine kinase adaptor protein 2, [RH, Score=241, Expect=4e-75]; ENSMUSG00000032475, Nck1, non-catalytic region of tyrosine kinase adaptor protein 1, [RH, Score=238, Expect=6e-74]} {Dmel: FBgn0010583, dock, dreadlocks, [RH, Score=226, Expect=7e-68]} {Celegans: WBGene00006410, nck-1, NCK (Non-Catalytic region of tyrosine Kinase) adaptor protein family, [RH, Score=246, Expect=3e-77]} {Smed: dd_Smed_v6_4816_0_1, dd_Smed_v6_4816_0_1, [RH, Score=250, Expect=2e-76]} {RNA1509_14401, RNA1509_27778} {RNA1310_13092.1, RNA1509_14401, RNA1509_27778} {RNA1509_14401, RNA1509_27778, RNA815_9153} Mlig455_012783 {REF} {Length: 3682} {TRANSSPLICED} {Pfam: SH3 domain [PF00018.30, score=137.4]; Variant SH3 domain [PF14604.8, score=120.1]; Variant SH3 domain [PF07653.19, score=86.3]; SH2 domain [PF00017.26, score=57.8]; SH3 domain [PF17902.3, score=32.8]; Bacterial SH3 domain [PF08239.13, score=32.7]} {Human: ENSG00000071051, NCK2, NCK adaptor protein 2, [RH, Score=251, Expect=5e-79]} {Mouse: ENSMUSG00000066877, Nck2, non-catalytic region of tyrosine kinase adaptor protein 2, [RH, Score=243, Expect=6e-76]; ENSMUSG00000032475, Nck1, non-catalytic region of tyrosine kinase adaptor protein 1, [RH, Score=238, Expect=5e-74]} {Dmel: FBgn0010583, dock, dreadlocks, [RH, Score=228, Expect=9e-69]} {Celegans: WBGene00006410, nck-1, NCK (Non-Catalytic region of tyrosine Kinase) adaptor protein family, [RH, Score=245, Expect=6e-77]} {Smed: dd_Smed_v6_4816_0_1, dd_Smed_v6_4816_0_1, [RH, Score=250, Expect=2e-76]} {RNA1509_27778} {RNA1310_13092.1} {RNA815_9153}
2.	MligTC455_17928	613	12.77	Mlig455_013498	Neo: Int S/G2/M Age: -	ACAD8	2.492	-	-	0.755	0.957	-	0.780	Mlig455_013498 {REF} {Length: 3076} {Pfam: Acyl-CoA dehydrogenase, C-terminal domain [PF00441.26, score=148.5]; Acyl-CoA dehydrogenase, middle domain [PF02770.21, score=98.8]; Acyl-CoA dehydrogenase, N-terminal domain [PF02771.18, score=94.2]; Acyl-CoA dehydrogenase, C-terminal domain [PF08028.13, score=68.3]} {Human: ENSG00000151498, ACAD8, acyl-CoA dehydrogenase family member 8, [RH, Score=517, Expect=0.0]} {Mouse: ENSMUSG00000031969, Acad8, acyl-Coenzyme A dehydrogenase family, member 8, [RH, Score=517, Expect=0.0]} {Dmel: FBgn0037999, CG4860, [Score=243, Expect=3e-76]} {Celegans: WBGene00017874, acdh-9, Acyl CoA DeHydrogenase, [RH, Score=470, Expect=3e-165]} {Smed: dd_Smed_v6_4806_0_1, dd_Smed_v6_4806_0_1, [Score=234, Expect=4e-73]} {RNA1509_28983, RNA1509_7278} {RNA1310_7892, RNA1509_28983, RNA1509_7278} {RNA1509_28983, RNA1509_7278, RNA815_7176.1}
3.	MligTC455_24343	499	10.39	Mlig455_009796	Neo: - Age: -		1.742	-	0.980	-	-	-	0.762	Mlig455_009796 {REF} {Length: 1301} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_8336} {RNA1310_6765} {RNA815_10771}
4.	MligTC455_31950	515	10.73	Mlig455_034849	Neo: - Age: -	KCTD1	1.732	-	-	0.959	0.773	-	-	Mlig455_034849 {REF} {Length: 3140} {TRANSSPLICED} {Human: ENSG00000134504, KCTD1, potassium channel tetramerization domain containing 1, [Score=68.2, Expect=9e-12]} {Mouse: ENSMUSG00000036225, Kctd1, potassium channel tetramerisation domain containing 1, [Score=68.6, Expect=4e-12]} {RNA1509_44313} {RNA1310_16403.1} {RNA815_10559.1}
5.	MligTC455_21993	1706	35.55	Mlig455_018527	Neo: - Age: -		1.68	-	-	0.727	-	-	0.953	Mlig455_018527 {REF} {Length: 2592} {TRANSSPLICED} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=46.2, Expect=1e-05]} {RNA1509_14855, RNA1509_36853, RNA1509_37946} {RNA1310_41484.1, RNA1509_14855, RNA1509_36853, RNA1509_37946} {RNA1509_14855, RNA1509_36853, RNA1509_37946, RNA815_25873}
6.	MligTC455_37339	540	11.24	Mlig455_025829	Neo: - Age: -	NR5A2	1.671	-	-	0.953	-	-	0.718	Mlig455_025829 {REF} {Length: 5905} {TRANSSPLICED} {Pfam: Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=79.8]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=18.9]} {Human: ENSG00000116833, NR5A2, nuclear receptor subfamily 5 group A member 2, [RH, Score=133, Expect=4e-33]} {Mouse: ENSMUSG00000026398, Nr5a2, nuclear receptor subfamily 5, group A, member 2, [RH, Score=142, Expect=3e-36]} {Dmel: FBgn0001078, ftz-f1, ftz transcription factor 1, [Score=121, Expect=9e-29]} {Smed: dd_Smed_v6_7551_0_1, dd_Smed_v6_7551_0_1, [RH, Score=127, Expect=6e-31]} {RNA1509_18060, RNA1509_32136, RNA1509_33357, RNA1509_46535, RNA1509_50621, RNA1509_59801, RNA1509_8315} {RNA1310_13358, RNA1509_18060, RNA1509_32136, RNA1509_33357, RNA1509_46535, RNA1509_50621, RNA1509_59801, RNA1509_8315} {RNA1509_18060, RNA1509_32136, RNA1509_33357, RNA1509_46535, RNA1509_50621, RNA1509_59801, RNA1509_8315, RNA815_9164}
7.	MligTC455_11417	44	0.92	Mlig455_033635, Mlig455_033731	Neo: - Age: -		0.966	-	0.966	-	-	-	-	Mlig455_033635 {REF} {Length: 1105} {RNA1310_89944} Mlig455_033731 {REF} {Length: 942} {RNA1310_89944}
8.	MligTC455_24344	433	9.03	Mlig455_057326	Neo: - Age: -	PFKFB1	0.957	-	0.957	-	-	-	-	Mlig455_057326 {REF} {Length: 2830} {Pfam: 6-phosphofructo-2-kinase [PF01591.20, score=201.1]; Histidine phosphatase superfamily (branch 1) [PF00300.24, score=133.7]} {Human: ENSG00000158571, PFKFB1, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1, [Score=469, Expect=8e-161]; ENSG00000170525, PFKFB3, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, [Score=455, Expect=5e-155]; ENSG00000114268, PFKFB4, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4, [Score=455, Expect=2e-155]; ENSG00000123836, PFKFB2, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2, [Score=448, Expect=3e-152]} {Mouse: ENSMUSG00000025271, Pfkfb1, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1, [Score=470, Expect=7e-162]; ENSMUSG00000026773, Pfkfb3, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, [Score=462, Expect=2e-158]; ENSMUSG00000025648, Pfkfb4, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4, [Score=456, Expect=4e-156]} {Dmel: FBgn0027621, Pfrx, 6-phosphofructo-2-kinase, [Score=427, Expect=7e-144]} {Celegans: WBGene00022456, pfkb-1.1, [Score=418, Expect=7e-142]} {Smed: dd_Smed_v6_3959_0_1, dd_Smed_v6_3959_0_1, [Score=477, Expect=2e-164]} {RNA1509_8336} {RNA1310_6765, RNA1509_8336} {RNA1509_8336, RNA815_4788.1}
9.	MligTC455_25285	69	1.43	Mlig455_056009	Neo: - Age: -	PCDH9	0.957	-	0.957	-	-	-	-	Mlig455_056009 {REF} {Length: 4817} {Pfam: Cadherin domain [PF00028.19, score=173.0]; Cadherin-like [PF16184.7, score=24.5]; Cadherin-like [PF08266.14, score=21.0]} {Human: ENSG00000184226, PCDH9, protocadherin 9, [Score=211, Expect=5e-55]} {Mouse: ENSMUSG00000055421, Pcdh9, protocadherin 9, [Score=211, Expect=2e-55]} {Dmel: FBgn0024836, stan, starry night, [Score=176, Expect=5e-44]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=143, Expect=3e-34]} {Smed: dd_Smed_v6_21207_0_1, dd_Smed_v6_21207_0_1, [RH, Score=294, Expect=1e-83]} {RNA1509_58565} {RNA1310_1772} {RNA815_3280}
10.	MligTC455_51098	247	5.15	Mlig455_043627	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.925		0.957	-	0.957	-	-	-	-	Mlig455_043627 {REF} {Length: 3704} {Pfam: TIR domain [PF13676.8, score=28.9]} {Smed: dd_Smed_v6_9315_0_1, dd_Smed_v6_9315_0_1, [Score=184, Expect=2e-51]} {RNA1509_24506, RNA1509_59184} {RNA1310_18225, RNA1509_59184} {RNA1509_59184, RNA815_24239}
11.	MligTC455_23080	199	4.15	Mlig455_011733	Neo: - Age: logFC(26M/2M)=-0.537	CUBN	0.956	-	0.956	-	-	-	-	Mlig455_011733 {REF} {Length: 1824} {Pfam: EGF-like domain [PF00008.29, score=38.3]; Human growth factor-like EGF [PF12661.9, score=21.2]} {Human: ENSG00000107611, CUBN, cubilin, [Score=60.8, Expect=3e-10]} {Mouse: ENSMUSG00000049252, Lrp1b, low density lipoprotein-related protein 1B (deleted in tumors), [Score=52.8, Expect=8e-08]; ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=51.6, Expect=2e-07]; ENSMUSG00000074505, Fat3, FAT atypical cadherin 3, [Score=51.2, Expect=3e-07]} {Dmel: FBgn0259140, CG42255, [Score=46.2, Expect=1e-05]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=54.3, Expect=2e-08]} {RNA1509_38266} {RNA1310_19274} {RNA815_9585.2}
12.	MligTC455_51573	711	14.82	Mlig455_022798	Neo: - Age: Down-Up-Down Region-enriched R5: 1.108/0.00472	NAE1	0.953	-	-	-	-	-	0.953	Mlig455_022798 {REF} {Length: 5749} {Pfam: ThiF family [PF00899.23, score=75.9]} {Human: ENSG00000159593, NAE1, NEDD8 activating enzyme E1 subunit 1, [RH, Score=391, Expect=5e-121]} {Mouse: ENSMUSG00000031878, Nae1, NEDD8 activating enzyme E1 subunit 1, [RH, Score=395, Expect=1e-122]} {Dmel: FBgn0261112, APP-BP1, beta-Amyloid precursor protein binding protein 1, [RH, Score=325, Expect=1e-97]} {Celegans: WBGene00006735, ula-1, NEDD8-activating enzyme E1 regulatory subunit, [Score=259, Expect=8e-75]} {Smed: dd_Smed_v6_4907_0_1, dd_Smed_v6_4907_0_1, [RH, Score=368, Expect=4e-113]} {RNA1509_57386} {RNA1310_3169} {RNA815_2625}

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