Data search


search
Exact
Search

Results for MligTC455_50989

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_50989 844 17.58 Mlig455_061329, Mlig455_061350, Mlig455_062679

Neo: -

Age: -

Mlig455_061329 {REF} {Length: 2769} {RNA1509_19235, RNA1509_39226} {RNA1310_7441.3, RNA1509_19235, RNA1509_39226} {RNA1509_19235, RNA1509_39226, RNA815_3528}

Mlig455_061350 {REF} {Length: 2282} {RNA1509_39226} {RNA1310_7441.3} {RNA815_3528}

Mlig455_062679 {REF} {Length: 1180} {RNA1509_39226} {RNA1310_7441.3} {RNA815_3528}

Cumulative graph for MligTC455_50989

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.935 4.457 0.39648 1.00000
RegionR2 -0.68 4.457 0.22635 0.59713
RegionR3 0.763 4.457 0.06794 0.46073
RegionR4 0.539 4.457 0.27603 0.58279
RegionR5 0.234 4.457 0.57253 0.93083
RegionR6 0.457 4.457 0.30454 0.89549
RegionR7 -1.264 4.457 0.04390 0.40269
RegionR8 0.887 4.457 0.12230 0.64265

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.851 4.457 0.11422 0.83878
RegenerationR2 0.422 4.457 0.40470 0.81711
RegenerationR3 -0.177 4.457 0.72900 0.95749
RegenerationR4 0.694 4.457 0.18539 0.62667
RegenerationR5 0.003 4.457 0.99532 1.00000
RegenerationR6 0.268 4.457 0.59447 0.86603
RegenerationBL -0.254 4.457 0.65204 0.98861
RegenerationTP -1.083 4.457 0.12110 0.53027


Genes with expression patterns similar to MligTC455_50989

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_50989 844 17.58 Mlig455_061329, Mlig455_061350, Mlig455_062679

Neo: -

Age: -

6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_061329 {REF} {Length: 2769} {RNA1509_19235, RNA1509_39226} {RNA1310_7441.3, RNA1509_19235, RNA1509_39226} {RNA1509_19235, RNA1509_39226, RNA815_3528}

Mlig455_061350 {REF} {Length: 2282} {RNA1509_39226} {RNA1310_7441.3} {RNA815_3528}

Mlig455_062679 {REF} {Length: 1180} {RNA1509_39226} {RNA1310_7441.3} {RNA815_3528}
2. MligTC455_10434 216 4.49 Mlig455_007360

Neo: -

Age: -

DNAJC28 1.724 0.765 - - - - 0.959 Mlig455_007360 {REF} {Length: 2264} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF1992) [PF09350.12, score=42.8]; DnaJ domain [PF00226.33, score=38.8]} {Human: ENSG00000262911, DNAJC28, DnaJ heat shock protein family (Hsp40) member C28, [RH, Score=167, Expect=3e-47]; ENSG00000177692, DNAJC28, DnaJ heat shock protein family (Hsp40) member C28, [RH, Score=167, Expect=3e-47]} {Mouse: ENSMUSG00000039763, Dnajc28, DnaJ heat shock protein family (Hsp40) member C28, [RH, Score=177, Expect=8e-51]} {Dmel: FBgn0263027, CG43322, [RH, Score=195, Expect=2e-58]} {RNA1509_25206, RNA1509_42321} {RNA1310_16527, RNA1509_25206, RNA1509_42321} {RNA1509_25206, RNA1509_42321, RNA815_8921.1}
3. MligTC455_48368 155 3.24 Mlig455_012284

Neo: -

Age: Down-Up-Down

TMEM17 1.69 - - - - 0.737 0.953 Mlig455_012284 {REF} {Length: 2954} {TRANSSPLICED} {Pfam: Predicted membrane protein [PF09799.11, score=76.1]} {Human: ENSG00000186889, TMEM17, transmembrane protein 17, [RH, Score=68.6, Expect=1e-13]} {Mouse: ENSMUSG00000049904, Tmem17, transmembrane protein 17, [RH, Score=74.3, Expect=6e-16]} {Celegans: WBGene00022733, tmem-17, TMEM (Human TransMEMbrane protein) homolog, [RH, Score=53.1, Expect=6e-09]} {Smed: dd_Smed_v6_10264_0_1, dd_Smed_v6_10264_0_1, [RH, Score=157, Expect=4e-48]} {RNA1509_27396, RNA1509_32449, RNA1509_50865, RNA1509_54923} {RNA1310_37391.1, RNA1509_27396, RNA1509_32449, RNA1509_50865, RNA1509_54923} {RNA1509_27396, RNA1509_32449, RNA1509_50865, RNA1509_54923, RNA815_18787}
4. MligTC455_49944 108 2.25 Mlig455_067437

Neo: -

Age: logFC(26M/2M)=-0.477

Region-enriched R4: 2.865/0.02691

GSTP1 1.674 - - 0.720 - 0.954 - Mlig455_067437 {REF} {Length: 1036} {TRANSSPLICED} {Pfam: Glutathione S-transferase, C-terminal domain [PF14497.8, score=66.1]; Glutathione S-transferase, C-terminal domain [PF00043.27, score=21.1]} {Human: ENSG00000084207, GSTP1, glutathione S-transferase pi 1, [Score=66.2, Expect=9e-13]} {Mouse: ENSMUSG00000097663, Gstp3, glutathione S-transferase pi 3, [Score=56.2, Expect=3e-09]; ENSMUSG00000058216, Gstp3, glutathione S-transferase pi 3, [Score=56.2, Expect=3e-09]; ENSMUSG00000068762, Gstm6, glutathione S-transferase, mu 6, [Score=55.8, Expect=4e-09]} {Celegans: WBGene00001762, gst-14, Glutathione S-Transferase, [Score=64.7, Expect=1e-12]} {RNA1509_34951} {RNA1310_12535} {RNA815_15521.1}
5. MligTC455_25695 3195 66.57 Mlig455_002528, Mlig455_002640

Neo: -

Age: Down-Up-Down

Regeneration-upregulated TP: 1.445

Regeneration-enriched TP: 1.445

RHEB 0.963 - - - - - 0.963

Mlig455_002528 {REF} {Length: 3119} {Pfam: Ras family [PF00071.24, score=135.4]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=52.4]; ADP-ribosylation factor family [PF00025.23, score=38.3]; RsgA GTPase [PF03193.18, score=31.8]; Elongation factor Tu GTP binding domain [PF00009.29, score=28.5]; 50S ribosome-binding GTPase [PF01926.25, score=24.4]; Ferrous iron transport protein B [PF02421.20, score=22.3]} {Human: ENSG00000106615, RHEB, Ras homolog, mTORC1 binding, [RH, Score=148, Expect=1e-44]} {Mouse: ENSMUSG00000028945, Rheb, Ras homolog enriched in brain, [RH, Score=149, Expect=5e-45]} {Dmel: FBgn0041191, Rheb, Ras homolog enriched in brain, [RH, Score=145, Expect=4e-44]} {Celegans: WBGene00010038, rheb-1, GTP-binding protein Rheb homolog 1, [RH, Score=130, Expect=4e-38]} {Smed: dd_Smed_v6_1239_0_1, dd_Smed_v6_1239_0_1, [Score=120, Expect=2e-34]} {RNA1509_11415} {RNA1310_24617, RNA1509_11415} {RNA1509_11415, RNA815_12154}

Mlig455_002640 {REF} {Length: 3123} {Pfam: Ras family [PF00071.24, score=135.4]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=52.4]; ADP-ribosylation factor family [PF00025.23, score=38.3]; RsgA GTPase [PF03193.18, score=31.8]; Elongation factor Tu GTP binding domain [PF00009.29, score=28.5]; 50S ribosome-binding GTPase [PF01926.25, score=24.4]; Ferrous iron transport protein B [PF02421.20, score=22.3]} {Human: ENSG00000106615, RHEB, Ras homolog, mTORC1 binding, [RH, Score=148, Expect=1e-44]} {Mouse: ENSMUSG00000028945, Rheb, Ras homolog enriched in brain, [RH, Score=149, Expect=5e-45]} {Dmel: FBgn0041191, Rheb, Ras homolog enriched in brain, [RH, Score=145, Expect=4e-44]} {Celegans: WBGene00010038, rheb-1, GTP-binding protein Rheb homolog 1, [RH, Score=130, Expect=4e-38]} {Smed: dd_Smed_v6_1239_0_1, dd_Smed_v6_1239_0_1, [Score=120, Expect=2e-34]} {RNA1509_11415} {RNA1310_24617} {RNA815_12154}
6. MligTC455_27658 354 7.38 Mlig455_004546, Mlig455_028547, Mlig455_028548

Neo: -

Age: -

COQ3 0.952 - - - - - 0.952

Mlig455_004546 {REF} {Length: 1867} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF13489.8, score=79.3]; Methyltransferase domain [PF08241.14, score=70.0]; Methyltransferase domain [PF13649.8, score=57.4]; Methyltransferase domain [PF08242.14, score=52.4]; Methyltransferase domain [PF13847.8, score=49.8]; Mycolic acid cyclopropane synthetase [PF02353.22, score=28.9]; Methyltransferase domain [PF13679.8, score=20.8]; Methyltransferase small domain [PF05175.16, score=19.4]; Nodulation protein S (NodS) [PF05401.13, score=19.3]} {Human: ENSG00000132423, COQ3, coenzyme Q3, methyltransferase, [RH, Score=204, Expect=2e-63]} {Mouse: ENSMUSG00000028247, Coq3, coenzyme Q3 methyltransferase, [RH, Score=202, Expect=9e-63]} {Dmel: FBgn0032922, CG9249, [RH, Score=148, Expect=8e-43]} {Celegans: WBGene00000763, coq-3, Ubiquinone biosynthesis O-methyltransferase, mitochondrial, [RH, Score=167, Expect=9e-51]} {Smed: dd_Smed_v6_9618_0_1, dd_Smed_v6_9618_0_1, [RH, Score=172, Expect=2e-52]} {RNA1509_44835} {RNA1310_20921.1} {RNA815_12330}

Mlig455_028547 {REF} {Length: 1474} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF13489.8, score=81.1]; Methyltransferase domain [PF08241.14, score=70.0]; Methyltransferase domain [PF13649.8, score=57.4]; Methyltransferase domain [PF08242.14, score=52.4]; Methyltransferase domain [PF13847.8, score=49.8]; Mycolic acid cyclopropane synthetase [PF02353.22, score=28.9]; Methyltransferase domain [PF13679.8, score=20.7]; Methyltransferase small domain [PF05175.16, score=19.4]; Nodulation protein S (NodS) [PF05401.13, score=19.3]} {Human: ENSG00000132423, COQ3, coenzyme Q3, methyltransferase, [RH, Score=204, Expect=2e-63]} {Mouse: ENSMUSG00000028247, Coq3, coenzyme Q3 methyltransferase, [RH, Score=203, Expect=5e-63]} {Dmel: FBgn0032922, CG9249, [RH, Score=148, Expect=6e-43]} {Celegans: WBGene00000763, coq-3, Ubiquinone biosynthesis O-methyltransferase, mitochondrial, [RH, Score=167, Expect=2e-50]} {Smed: dd_Smed_v6_9618_0_1, dd_Smed_v6_9618_0_1, [RH, Score=177, Expect=1e-54]} {RNA1509_44835} {RNA1310_20921.1} {RNA815_12330}

Mlig455_028548 {REF} {Length: 1821} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF13489.8, score=79.3]; Methyltransferase domain [PF08241.14, score=70.0]; Methyltransferase domain [PF13649.8, score=57.4]; Methyltransferase domain [PF08242.14, score=52.4]; Methyltransferase domain [PF13847.8, score=49.8]; Mycolic acid cyclopropane synthetase [PF02353.22, score=28.9]; Methyltransferase domain [PF13679.8, score=20.8]; Methyltransferase small domain [PF05175.16, score=19.4]; Nodulation protein S (NodS) [PF05401.13, score=19.3]} {Human: ENSG00000132423, COQ3, coenzyme Q3, methyltransferase, [RH, Score=204, Expect=2e-63]} {Mouse: ENSMUSG00000028247, Coq3, coenzyme Q3 methyltransferase, [RH, Score=202, Expect=9e-63]} {Dmel: FBgn0032922, CG9249, [RH, Score=148, Expect=8e-43]} {Celegans: WBGene00000763, coq-3, Ubiquinone biosynthesis O-methyltransferase, mitochondrial, [RH, Score=167, Expect=9e-51]} {Smed: dd_Smed_v6_9618_0_1, dd_Smed_v6_9618_0_1, [RH, Score=172, Expect=2e-52]} {RNA1509_44835} {RNA1310_20921.1} {RNA815_12330}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA