TomoSeq data search

Data search

Results for MligTC455_51048

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_51048

498

10.37

Mlig455_015136, Mlig455_015256

Neo: Int S/G2/M

Age: -

Region-enriched R5: 2.106/0.00845

OGFOD3

Mlig455_015136 {REF} {Length: 2291} {Pfam: 2OG-Fe(II) oxygenase superfamily [PF13640.8, score=36.6]; Oxygenase, catalysing oxidative methylation of damaged DNA [PF09859.11, score=19.1]} {Human: ENSG00000181396, OGFOD3, 2-oxoglutarate and iron dependent oxygenase domain containing 3, [RH, Score=226, Expect=7e-72]} {Mouse: ENSMUSG00000025169, Ogfod3, 2-oxoglutarate and iron-dependent oxygenase domain containing 3, [RH, Score=219, Expect=2e-69]} {RNA1509_27976} {RNA1310_21853} {RNA815_9472}

Mlig455_015256 {REF} {Length: 1826} {TRANSSPLICED} {Pfam: 2OG-Fe(II) oxygenase superfamily [PF13640.8, score=36.9]; Oxygenase, catalysing oxidative methylation of damaged DNA [PF09859.11, score=20.2]} {Human: ENSG00000181396, OGFOD3, 2-oxoglutarate and iron dependent oxygenase domain containing 3, [RH, Score=227, Expect=2e-72]} {Mouse: ENSMUSG00000025169, Ogfod3, 2-oxoglutarate and iron-dependent oxygenase domain containing 3, [RH, Score=220, Expect=6e-70]} {RNA1509_27976} {RNA1310_21853, RNA1509_27976} {RNA1509_27976, RNA815_9472}

Cumulative graph for MligTC455_51048

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-7.238	3.859	0.03781	0.47767
RegionR2	1.245	3.859	0.18823	0.54267
RegionR3	1.489	3.859	0.05458	0.41006
RegionR4	0.769	3.859	0.43030	0.75857
RegionR5	2.106	3.859	0.00079	0.00845
RegionR6	0.549	3.859	0.55155	1.00000
RegionR7	0.806	3.859	0.39512	1.00000
RegionR8	0.275	3.859	0.74516	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.852	3.859	0.99987	1.00000
RegenerationR2	-0.399	3.859	0.50476	0.87317
RegenerationR3	0.015	3.859	0.97949	1.00000
RegenerationR4	1.041	3.859	0.11030	0.51000
RegenerationR5	-0.613	3.859	0.28082	0.70980
RegenerationR6	-0.303	3.859	0.65906	0.90277
RegenerationBL	-1.265	3.859	0.16550	0.48820
RegenerationTP	0.908	3.859	0.20455	0.64634

Genes with expression patterns similar to MligTC455_51048

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_51048	498	10.37	Mlig455_015136, Mlig455_015256	Neo: Int S/G2/M Age: - Region-enriched R5: 2.106/0.00845	OGFOD3	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_015136 {REF} {Length: 2291} {Pfam: 2OG-Fe(II) oxygenase superfamily [PF13640.8, score=36.6]; Oxygenase, catalysing oxidative methylation of damaged DNA [PF09859.11, score=19.1]} {Human: ENSG00000181396, OGFOD3, 2-oxoglutarate and iron dependent oxygenase domain containing 3, [RH, Score=226, Expect=7e-72]} {Mouse: ENSMUSG00000025169, Ogfod3, 2-oxoglutarate and iron-dependent oxygenase domain containing 3, [RH, Score=219, Expect=2e-69]} {RNA1509_27976} {RNA1310_21853} {RNA815_9472} Mlig455_015256 {REF} {Length: 1826} {TRANSSPLICED} {Pfam: 2OG-Fe(II) oxygenase superfamily [PF13640.8, score=36.9]; Oxygenase, catalysing oxidative methylation of damaged DNA [PF09859.11, score=20.2]} {Human: ENSG00000181396, OGFOD3, 2-oxoglutarate and iron dependent oxygenase domain containing 3, [RH, Score=227, Expect=2e-72]} {Mouse: ENSMUSG00000025169, Ogfod3, 2-oxoglutarate and iron-dependent oxygenase domain containing 3, [RH, Score=220, Expect=6e-70]} {RNA1509_27976} {RNA1310_21853, RNA1509_27976} {RNA1509_27976, RNA815_9472}
2.	MligTC455_34550	340	7.09	Mlig455_066939	Neo: Int S/G2/M Age: Up-Down-Up	IGBP1	1.74	-	-	0.966	-	-	0.774	Mlig455_066939 {REF} {Length: 2260} {TRANSSPLICED} {Pfam: TAP42-like family [PF04177.14, score=200.1]} {Human: ENSG00000089289, IGBP1, immunoglobulin binding protein 1, [RH, Score=154, Expect=4e-43]} {Mouse: ENSMUSG00000031221, Igbp1, immunoglobulin (CD79A) binding protein 1, [RH, Score=158, Expect=5e-45]} {Dmel: FBgn0051852, Tap42, Two A-associated protein of 42kDa, [RH, Score=147, Expect=2e-40]} {Celegans: WBGene00022193, ppfr-4, Protein Phosphatase Four Regulatory subunit, [RH, Score=132, Expect=2e-35]} {Smed: dd_Smed_v6_6424_0_1, dd_Smed_v6_6424_0_1, [RH, Score=130, Expect=5e-35]} {RNA1509_19662, RNA1509_47583} {RNA1310_27078, RNA1509_19662, RNA1509_47583} {RNA1509_19662, RNA1509_47583, RNA815_14985}
3.	MligTC455_17373	189	3.93	Mlig455_062650	Neo: Int S/G2/M Age: Up-Down-Down, logFC(26M/2M)=-0.296		0.964	-	-	0.964	-	-	-	Mlig455_062650 {REF} {Length: 4801} {TRANSSPLICED} {Mouse: ENSMUSG00000073490, Ifi207, interferon activated gene 207, [Score=57.4, Expect=1e-07]} {RNA1509_41587} {RNA1310_6577.1} {RNA815_11491.2}
4.	MligTC455_34018	458	9.54	Mlig455_008955	Neo: - Age: - Region-enriched R5: 1.990/0.00877	FAM126B	0.963	-	-	-	-	-	0.963	Mlig455_008955 {REF} {Length: 2791} {TRANSSPLICED} {Pfam: Hyccin [PF09790.11, score=160.1]} {Human: ENSG00000155744, FAM126B, family with sequence similarity 126 member B, [RH, Score=107, Expect=5e-24]} {Mouse: ENSMUSG00000038174, Fam126b, family with sequence similarity 126, member B, [RH, Score=108, Expect=1e-24]} {Dmel: FBgn0034269, CG6406, [Score=98.6, Expect=1e-21]} {Celegans: WBGene00017037, D1069.3, [RH, Score=59.7, Expect=3e-09]} {Smed: dd_Smed_v6_9629_0_1, dd_Smed_v6_9629_0_1, [RH, Score=55.1, Expect=7e-08]} {RNA1509_16929} {RNA1310_6338, RNA1509_16929} {RNA1509_16929, RNA815_12332}
5.	MligTC455_47468	394	8.21	Mlig455_005218	Neo: Int S/G2/M Age: Down-Up-Down, logFC(26M/2M)=0.781		0.962	-	-	-	-	-	0.962	Mlig455_005218 {REF} {Length: 4129} {TRANSSPLICED} {RNA1509_36445} {RNA1310_3947} {RNA815_1458}
6.	MligTC455_45375	245	5.1	Mlig455_009938	Neo: - Age: -	PFKFB1	0.961	-	-	-	-	-	0.961	Mlig455_009938 {REF} {Length: 2838} {Pfam: 6-phosphofructo-2-kinase [PF01591.20, score=288.2]; Histidine phosphatase superfamily (branch 1) [PF00300.24, score=129.5]; AAA domain [PF13671.8, score=26.0]} {Human: ENSG00000158571, PFKFB1, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1, [RH, Score=524, Expect=0.0]; ENSG00000123836, PFKFB2, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2, [RH, Score=509, Expect=1e-176]; ENSG00000114268, PFKFB4, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4, [RH, Score=504, Expect=3e-175]; ENSG00000170525, PFKFB3, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, [RH, Score=498, Expect=2e-172]} {Mouse: ENSMUSG00000025271, Pfkfb1, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1, [RH, Score=523, Expect=0.0]; ENSMUSG00000026773, Pfkfb3, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, [RH, Score=506, Expect=2e-176]; ENSMUSG00000025648, Pfkfb4, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4, [RH, Score=505, Expect=5e-176]; ENSMUSG00000026409, Pfkfb2, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2, [RH, Score=502, Expect=1e-174]} {Dmel: FBgn0027621, Pfrx, 6-phosphofructo-2-kinase, [RH, Score=484, Expect=2e-164]} {Celegans: WBGene00022456, pfkb-1.1, [RH, Score=455, Expect=4e-157]} {Smed: dd_Smed_v6_3959_0_1, dd_Smed_v6_3959_0_1, [RH, Score=534, Expect=0.0]} {RNA1509_14561, RNA1509_15746} {RNA1310_8036.1, RNA1509_14561, RNA1509_15746} {RNA1509_14561, RNA1509_15746, RNA815_2585.1}
7.	MligTC455_23408	388	8.08	Mlig455_000840, Mlig455_057151	Neo: - Age: - Region-enriched R5: 2.131/0.03455	SCARB2	0.957	-	-	-	-	0.957	-	Mlig455_000840 {REF} {Length: 2720} {TRANSSPLICED} {Pfam: CD36 family [PF01130.23, score=422.2]} {Human: ENSG00000138760, SCARB2, scavenger receptor class B member 2, [Score=266, Expect=7e-84]; ENSG00000135218, CD36, CD36 molecule, [Score=257, Expect=3e-80]} {Mouse: ENSMUSG00000029426, Scarb2, scavenger receptor class B, member 2, [Score=271, Expect=2e-85]; ENSMUSG00000002944, Cd36, CD36 molecule, [Score=261, Expect=4e-82]} {Dmel: FBgn0010435, emp, epithelial membrane protein, [Score=215, Expect=5e-64]} {Celegans: WBGene00013039, scav-3, SCAVenger receptor (CD36 family) related, [RH, Score=178, Expect=5e-50]} {Smed: dd_Smed_v6_2304_0_1, dd_Smed_v6_2304_0_1, [RH, Score=358, Expect=1e-119]} {RNA1509_18352, RNA1509_30658, RNA1509_48645} {RNA1310_12079.2, RNA1509_18352, RNA1509_30658, RNA1509_48645} {RNA1509_18352, RNA1509_30658, RNA1509_48645, RNA815_4787.1} Mlig455_057151 {REF} {Length: 2642} {TRANSSPLICED} {Pfam: CD36 family [PF01130.23, score=421.5]} {Human: ENSG00000138760, SCARB2, scavenger receptor class B member 2, [Score=265, Expect=4e-83]; ENSG00000135218, CD36, CD36 molecule, [Score=256, Expect=5e-80]} {Mouse: ENSMUSG00000029426, Scarb2, scavenger receptor class B, member 2, [Score=269, Expect=6e-85]; ENSMUSG00000002944, Cd36, CD36 molecule, [Score=261, Expect=9e-82]} {Dmel: FBgn0010435, emp, epithelial membrane protein, [Score=216, Expect=1e-64]} {Celegans: WBGene00013039, scav-3, SCAVenger receptor (CD36 family) related, [RH, Score=177, Expect=9e-50]} {Smed: dd_Smed_v6_2304_0_1, dd_Smed_v6_2304_0_1, [RH, Score=358, Expect=1e-119]} {RNA1509_18352, RNA1509_49221} {RNA1310_12079.2, RNA1509_49221} {RNA1509_49221, RNA815_4787.1}
8.	MligTC455_42764	351	7.31	Mlig455_031291, Mlig455_031338	Neo: - Age: - Region-enriched R4: 2.254/0.02916 Region-enriched R5: 2.042/0.00169	ALDH16A1	0.957	-	-	-	-	-	0.957	Mlig455_031291 {REF} {Length: 2722} {TRANSSPLICED} {Pfam: Aldehyde dehydrogenase family [PF00171.24, score=65.1]} {Human: ENSG00000161618, ALDH16A1, aldehyde dehydrogenase 16 family member A1, [Score=54.3, Expect=6e-07]} {RNA1509_14483} {RNA1310_10423.1} {RNA815_28466} Mlig455_031338 {REF} {Length: 2766} {Pfam: Aldehyde dehydrogenase family [PF00171.24, score=66.0]} {RNA1509_14483, RNA1509_19770} {RNA1310_10423.1, RNA1509_19770} {RNA1509_19770, RNA815_28466}
9.	MligTC455_15340	613	12.78	Mlig455_041048, Mlig455_041153, Mlig455_070076	Neo: Int S/G2/M Age: - Region-enriched R5: 1.686/0.04561	WEE2	0.952	-	-	-	-	-	0.952	Mlig455_041048 {REF} {Length: 3300} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=105.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=72.1]} {Human: ENSG00000214102, WEE2, WEE1 homolog 2, [RH, Score=120, Expect=3e-28]; ENSG00000263042, WEE2, WEE1 homolog 2, [RH, Score=120, Expect=3e-28]; ENSG00000166483, WEE1, WEE1 G2 checkpoint kinase, [RH, Score=114, Expect=8e-26]} {Mouse: ENSMUSG00000037159, Wee2, WEE1 homolog 2 (S. pombe), [RH, Score=122, Expect=8e-29]; ENSMUSG00000031016, Wee1, WEE 1 homolog 1 (S. pombe), [RH, Score=119, Expect=1e-27]} {Dmel: FBgn0011737, Wee1, Wee1 kinase, [Score=106, Expect=1e-23]} {Celegans: WBGene00006786, unc-51, Serine/threonine-protein kinase unc-51, [Score=58.5, Expect=1e-08]} {Smed: dd_Smed_v6_17244_0_1, dd_Smed_v6_17244_0_1, [Score=68.2, Expect=7e-12]} {RNA1509_36826, RNA1509_45600} {RNA1310_8775, RNA1509_36826, RNA1509_45600} {RNA1509_36826, RNA1509_45600, RNA815_13868} Mlig455_041153 {REF} {Length: 3290} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=103.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=73.5]} {Human: ENSG00000214102, WEE2, WEE1 homolog 2, [RH, Score=122, Expect=1e-28]; ENSG00000263042, WEE2, WEE1 homolog 2, [RH, Score=122, Expect=1e-28]} {Mouse: ENSMUSG00000037159, Wee2, WEE1 homolog 2 (S. pombe), [RH, Score=122, Expect=9e-29]} {Dmel: FBgn0011737, Wee1, Wee1 kinase, [RH, Score=109, Expect=1e-24]} {Celegans: WBGene00006786, unc-51, Serine/threonine-protein kinase unc-51, [Score=62.0, Expect=1e-09]} {Smed: dd_Smed_v6_17244_0_1, dd_Smed_v6_17244_0_1, [Score=70.9, Expect=8e-13]} {RNA1509_36826} {RNA1310_8775} {RNA815_13868} Mlig455_070076 {REF} {Length: 3140} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=103.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=72.2]} {Human: ENSG00000214102, WEE2, WEE1 homolog 2, [RH, Score=120, Expect=4e-28]; ENSG00000263042, WEE2, WEE1 homolog 2, [RH, Score=120, Expect=4e-28]} {Mouse: ENSMUSG00000037159, Wee2, WEE1 homolog 2 (S. pombe), [RH, Score=121, Expect=2e-28]} {Dmel: FBgn0011737, Wee1, Wee1 kinase, [Score=106, Expect=9e-24]} {Celegans: WBGene00006786, unc-51, Serine/threonine-protein kinase unc-51, [Score=59.7, Expect=5e-09]} {Smed: dd_Smed_v6_17244_0_1, dd_Smed_v6_17244_0_1, [Score=68.6, Expect=5e-12]} {RNA1509_36826} {RNA1310_8775} {RNA815_13868}
10.	MligTC455_47554	346	7.2	Mlig455_050102	Neo: - Age: -		0.952	-	-	-	-	-	0.952	Mlig455_050102 {REF} {Length: 1552} {TRANSSPLICED} {RNA1509_41028} {RNA1310_33942.1} {RNA815_15423}
11.	MligTC455_35311	284	5.92	Mlig455_030358	Neo: Irradiation Age: Down-Up-Up, logFC(26M/2M)=0.245	NUP50	0.951	-	-	0.951	-	-	-	Mlig455_030358 {REF} {Length: 2323} {TRANSSPLICED} {Pfam: NUP50 (Nucleoporin 50 kDa) [PF08911.13, score=63.2]; RanBP1 domain [PF00638.20, score=43.4]} {Human: ENSG00000093000, NUP50, nucleoporin 50, [RH, Score=198, Expect=2e-57]} {Mouse: ENSMUSG00000016619, Nup50, nucleoporin 50, [RH, Score=102, Expect=5e-23]} {Dmel: FBgn0033264, Nup50, Nucleoporin 50kD, [RH, Score=174, Expect=6e-48]} {Smed: dd_Smed_v6_5140_0_1, dd_Smed_v6_5140_0_1, [RH, Score=175, Expect=4e-50]} {RNA1509_25929, RNA1509_9756} {RNA1310_9766, RNA1509_25929, RNA1509_9756} {RNA1509_25929, RNA1509_9756, RNA815_6757}

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