TomoSeq data search

Data search

Results for MligTC455_51118

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_51118

29

0.61

Mlig455_024251

Neo: -

Age: -

SATL1

Mlig455_024251 {REF} {Length: 1784} {Pfam: Histone H1-like nucleoprotein HC2 [PF07382.13, score=46.4]} {Human: ENSG00000184788, SATL1, spermidine/spermine N1-acetyl transferase like 1, [Score=59.7, Expect=1e-09]} {Mouse: ENSMUSG00000027422, Rrbp1, ribosome binding protein 1, [Score=65.9, Expect=7e-12]} {Dmel: FBgn0035550, CG11349, [RH, Score=55.8, Expect=1e-08]} {RNA1310_20835}

Cumulative graph for MligTC455_51118

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.473	1.044	0.99933	1.00000
RegionR2	2.539	1.044	0.38730	0.78159
RegionR3	2.326	1.044	0.30797	0.84739
RegionR4	-0.588	1.044	0.99930	1.00000
RegionR5	0.388	1.044	0.63003	0.98320
RegionR6	1.666	1.044	0.34344	0.93065
RegionR7	-2.078	1.044	0.99970	1.00000
RegionR8	-1.779	1.044	0.99954	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.611	1.044	0.99986	1.00000
RegenerationR2	-1.831	1.044	0.50290	0.87246
RegenerationR3	-0.239	1.044	0.74952	0.96466
RegenerationR4	0.577	1.044	0.52614	0.88259
RegenerationR5	-0.268	1.044	0.97957	1.00000
RegenerationR6	-0.298	1.044	0.76606	0.95932
RegenerationBL	-2.097	1.044	0.99968	1.00000
RegenerationTP	-0.834	1.044	0.99980	1.00000

Genes with expression patterns similar to MligTC455_51118

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_51118	29	0.61	Mlig455_024251	Neo: - Age: -	SATL1	4	-	1.000	1.000	1.000	1.000	-	Mlig455_024251 {REF} {Length: 1784} {Pfam: Histone H1-like nucleoprotein HC2 [PF07382.13, score=46.4]} {Human: ENSG00000184788, SATL1, spermidine/spermine N1-acetyl transferase like 1, [Score=59.7, Expect=1e-09]} {Mouse: ENSMUSG00000027422, Rrbp1, ribosome binding protein 1, [Score=65.9, Expect=7e-12]} {Dmel: FBgn0035550, CG11349, [RH, Score=55.8, Expect=1e-08]} {RNA1310_20835}
2.	MligTC455_39367	26	0.54	Mlig455_048186	Neo: - Age: -		1.879	-	-	0.972	-	0.907	-	Mlig455_048186 {REF} {Length: 2448} {TRANSSPLICED} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=26.8]} {RNA1509_15614} {RNA1310_52319.1} {RNA815_17448}
3.	MligTC455_12978	63	1.31	Mlig455_023948	Neo: - Age: -		1.689	-	0.727	-	-	0.962	-	Mlig455_023948 {REF} {Length: 2929} {RNA1310_80095.1}
4.	MligTC455_07872	176	3.66	Mlig455_055641	Neo: - Age: -	ARHGEF2	0.969	-	-	-	0.969	-	-	Mlig455_055641 {REF} {Length: 6227} {Pfam: RhoGEF domain [PF00621.22, score=49.4]; PH domain [PF17838.3, score=35.7]} {Human: ENSG00000116584, ARHGEF2, Rho/Rac guanine nucleotide exchange factor 2, [Score=130, Expect=9e-30]} {Mouse: ENSMUSG00000028059, Arhgef2, rho/rac guanine nucleotide exchange factor (GEF) 2, [Score=124, Expect=4e-28]; ENSMUSG00000066406, Akap13, A kinase (PRKA) anchor protein 13, [Score=123, Expect=1e-27]} {Dmel: FBgn0032796, CG10188, [Score=104, Expect=4e-22]} {Smed: dd_Smed_v6_3992_0_1, dd_Smed_v6_3992_0_1, [Score=69.7, Expect=1e-11]} {RNA1509_21243, RNA1509_38363} {RNA1310_3252.1, RNA1509_38363} {RNA1509_38363, RNA815_29713}
5.	MligTC455_28992	248	5.17	Mlig455_007574	Neo: - Age: - Region-enriched R3: 5.359/0.00013	SIX1	0.966	-	-	0.966	-	-	-	Mlig455_007574 {REF} {Length: 2756} {Pfam: Transcriptional regulator, SIX1, N-terminal SD domain [PF16878.7, score=146.3]; Homeodomain [PF00046.31, score=56.2]; Homeobox KN domain [PF05920.13, score=49.9]} {Human: ENSG00000126778, SIX1, SIX homeobox 1, [Score=313, Expect=9e-104]; ENSG00000170577, SIX2, SIX homeobox 2, [Score=307, Expect=3e-101]} {Mouse: ENSMUSG00000051367, Six1, sine oculis-related homeobox 1, [Score=313, Expect=5e-104]; ENSMUSG00000024134, Six2, sine oculis-related homeobox 2, [Score=308, Expect=1e-101]} {Dmel: FBgn0003460, so, sine oculis, [Score=303, Expect=3e-98]} {Celegans: WBGene00000454, ceh-33, Homeobox protein ceh-33, [RH, Score=246, Expect=2e-78]} {Smed: dd_Smed_v6_15436_0_1, dd_Smed_v6_15436_0_1, [RH, Score=326, Expect=2e-106]} {RNA1509_55511} {RNA1310_27700, RNA1509_55511} {RNA1509_55511, RNA815_16067}
6.	MligTC455_32941	211	4.39	Mlig455_059841	Neo: - Age: Up-Down-Down	GRIK2	0.963	-	-	-	0.963	-	-	Mlig455_059841 {REF} {Length: 5097} {Pfam: Ligand-gated ion channel [PF00060.28, score=186.4]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=131.9]; Receptor family ligand binding region [PF01094.30, score=83.3]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=67.8]; Periplasmic binding protein [PF13458.8, score=21.4]} {Human: ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [RH, Score=640, Expect=0.0]; ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [RH, Score=629, Expect=0.0]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [RH, Score=629, Expect=0.0]} {Mouse: ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [RH, Score=639, Expect=0.0]; ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [RH, Score=628, Expect=0.0]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [RH, Score=623, Expect=0.0]} {Dmel: FBgn0038837, CG3822, [RH, Score=624, Expect=0.0]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [RH, Score=464, Expect=7e-149]} {Smed: dd_Smed_v6_8816_0_1, dd_Smed_v6_8816_0_1, [RH, Score=702, Expect=0.0]} {RNA1509_25923} {RNA1310_4023.1, RNA1509_25923} {RNA1509_25923, RNA815_3049.1}
7.	MligTC455_53203	87	1.81	Mlig455_053913	Neo: - Age: -	TMEM45A	0.959	-	-	-	0.959	-	-	Mlig455_053913 {REF} {Length: 2492} {TRANSSPLICED} {Pfam: Family of unknown function (DUF716) [PF04819.14, score=92.7]} {Human: ENSG00000181458, TMEM45A, transmembrane protein 45A, [RH, Score=103, Expect=2e-25]} {Mouse: ENSMUSG00000041737, Tmem45b, transmembrane protein 45b, [Score=114, Expect=7e-30]} {Smed: dd_Smed_v6_1542_0_1, dd_Smed_v6_1542_0_1, [RH, Score=134, Expect=1e-37]} {RNA1509_27376, RNA1509_28424} {RNA1310_31035.1, RNA1509_28424} {RNA1509_28424, RNA815_13946}
8.	MligTC455_36770	30	0.63	Mlig455_032449	Neo: - Age: -		0.953	-	-	0.953	-	-	-	Mlig455_032449 {REF} {Length: 657} {NoTransDecoderORF} {RNA1310_93637}
9.	MligTC455_37615	43	0.89	Mlig455_009083	Neo: - Age: -	SMAD2	0.951	-	-	0.951	-	-	-	Mlig455_009083 {REF} {Length: 2776} {TRANSSPLICED} {Pfam: MH2 domain [PF03166.16, score=153.2]} {Human: ENSG00000175387, SMAD2, SMAD family member 2, [Score=141, Expect=1e-38]; ENSG00000166949, SMAD3, SMAD family member 3, [Score=140, Expect=1e-40]} {Mouse: ENSMUSG00000024563, Smad2, SMAD family member 2, [Score=141, Expect=8e-39]; ENSMUSG00000032402, Smad3, SMAD family member 3, [Score=140, Expect=7e-39]} {Dmel: FBgn0025800, Smox, Smad on X, [Score=144, Expect=4e-40]} {Celegans: WBGene00004857, sma-3, Dwarfin sma-3, [Score=112, Expect=7e-29]} {Smed: dd_Smed_v6_6050_0_1, dd_Smed_v6_6050_0_1, [Score=131, Expect=7e-36]} {RNA1509_38358, RNA1509_38696} {RNA1310_36628, RNA1509_38358, RNA1509_38696} {RNA1509_38358, RNA1509_38696, RNA815_20293}
10.	MligTC455_06725	6	0.13	Mlig455_032805	Neo: - Age: -	SLC9A2	0.95	-	-	-	-	0.950	-	Mlig455_032805 {REF} {Length: 4075} {Pfam: Sodium/hydrogen exchanger family [PF00999.23, score=245.6]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=28.0]} {Human: ENSG00000115616, SLC9A2, solute carrier family 9 member A2, [RH, Score=382, Expect=5e-117]} {Mouse: ENSMUSG00000026062, Slc9a2, solute carrier family 9 (sodium/hydrogen exchanger), member 2, [RH, Score=380, Expect=2e-116]} {Dmel: FBgn0040297, Nhe2, Na[+]/H[+] hydrogen exchanger 2, [RH, Score=350, Expect=4e-102]} {Celegans: WBGene00003943, pbo-4, Na(+)/H(+) exchanger protein 7, [RH, Score=358, Expect=5e-109]} {Smed: dd_Smed_v6_6286_0_1, dd_Smed_v6_6286_0_1, [RH, Score=416, Expect=2e-131]} {RNA1310_29003}
11.	MligTC455_45720	122	2.53	Mlig455_017856	Neo: - Age: Up-Down-Down		0.95	-	-	-	-	0.950	-	Mlig455_017856 {REF} {Length: 4797} {TRANSSPLICED} {RNA1509_41174} {RNA1310_29724} {RNA815_13192}

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