Data search
Results for MligTC455_51130
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_51130 | 381 | 7.93 | Mlig455_021517 | Neo: - Age: - |
ATP6V0C | Mlig455_021517 {REF} {Length: 2108} {Pfam: ATP synthase subunit C [PF00137.23, score=130.0]} {Human: ENSG00000185883, ATP6V0C, ATPase H+ transporting V0 subunit c, [RH, Score=226, Expect=6e-77]} {Mouse: ENSMUSG00000024121, Atp6v0c, ATPase, H+ transporting, lysosomal V0 subunit C, [RH, Score=228, Expect=1e-77]} {Dmel: FBgn0262736, Vha16-1, Vacuolar H[+] ATPase 16kD subunit 1, [RH, Score=216, Expect=3e-73]} {Celegans: WBGene00006911, vha-2, V-type proton ATPase 16 kDa proteolipid subunit 2/3, [RH, Score=196, Expect=2e-65]} {Smed: dd_Smed_v6_253_0_1, dd_Smed_v6_253_0_1, [RH, Score=245, Expect=5e-85]} {RNA1509_1926, RNA1509_53001} {RNA1310_15883.1, RNA1509_53001} {RNA1509_53001, RNA815_5987} |
Cumulative graph for MligTC455_51130
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.729 | 3.476 | 0.63872 | 1.00000 | |
| RegionR2 | -0.66 | 3.476 | 0.23146 | 0.60400 | |
| RegionR3 | 0.59 | 3.476 | 0.13340 | 0.62626 | |
| RegionR4 | 0.617 | 3.476 | 0.19867 | 0.47765 | |
| RegionR5 | 0.121 | 3.476 | 0.74953 | 1.00000 | |
| RegionR6 | 0.016 | 3.476 | 0.96893 | 1.00000 | |
| RegionR7 | -0.385 | 3.476 | 0.54623 | 1.00000 | |
| RegionR8 | 0.43 | 3.476 | 0.54279 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.888 | 3.476 | 0.26665 | 0.97007 | |
| RegenerationR2 | -0.421 | 3.476 | 0.31980 | 0.75842 | |
| RegenerationR3 | -0.486 | 3.476 | 0.22822 | 0.66337 | |
| RegenerationR4 | -0.284 | 3.476 | 0.49930 | 0.86913 | |
| RegenerationR5 | -0.18 | 3.476 | 0.63281 | 0.92341 | |
| RegenerationR6 | 0.068 | 3.476 | 0.87580 | 1.00000 | |
| RegenerationBL | -0.611 | 3.476 | 0.33337 | 0.70004 | |
| RegenerationTP | -0.841 | 3.476 | 0.22819 | 0.67325 |
Genes with expression patterns similar to MligTC455_51130
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_51130 | 381 | 7.93 | Mlig455_021517 | Neo: - Age: - |
ATP6V0C | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_021517 {REF} {Length: 2108} {Pfam: ATP synthase subunit C [PF00137.23, score=130.0]} {Human: ENSG00000185883, ATP6V0C, ATPase H+ transporting V0 subunit c, [RH, Score=226, Expect=6e-77]} {Mouse: ENSMUSG00000024121, Atp6v0c, ATPase, H+ transporting, lysosomal V0 subunit C, [RH, Score=228, Expect=1e-77]} {Dmel: FBgn0262736, Vha16-1, Vacuolar H[+] ATPase 16kD subunit 1, [RH, Score=216, Expect=3e-73]} {Celegans: WBGene00006911, vha-2, V-type proton ATPase 16 kDa proteolipid subunit 2/3, [RH, Score=196, Expect=2e-65]} {Smed: dd_Smed_v6_253_0_1, dd_Smed_v6_253_0_1, [RH, Score=245, Expect=5e-85]} {RNA1509_1926, RNA1509_53001} {RNA1310_15883.1, RNA1509_53001} {RNA1509_53001, RNA815_5987} |
| 2. | MligTC455_51016 | 314 | 6.55 | Mlig455_009931 | Neo: - Age: - |
TTC38 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_009931 {REF} {Length: 2154} {TRANSSPLICED} {Human: ENSG00000075234, TTC38, tetratricopeptide repeat domain 38, [RH, Score=170, Expect=7e-47]} {Mouse: ENSMUSG00000035944, Ttc38, tetratricopeptide repeat domain 38, [RH, Score=165, Expect=4e-45]} {Celegans: WBGene00013216, Y54G11A.7, [RH, Score=154, Expect=3e-41]} {RNA1509_24156} {RNA1310_11556.1, RNA1509_24156} {RNA1509_24156, RNA815_12974} |
| 3. | MligTC455_30149 | 3142 | 65.46 | Mlig455_037703, Mlig455_046395 | Neo: - Age: - |
TXNL1 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_037703 {REF} {Length: 3420} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF6285) [PF19802.1, score=24.0]} {RNA1509_5568} {RNA1310_17418.1} {RNA815_7479} Mlig455_046395 {REF} {Length: 2134} {TRANSSPLICED} {Pfam: PITH domain [PF06201.15, score=126.9]; Thioredoxin [PF00085.22, score=41.0]} {Human: ENSG00000091164, TXNL1, thioredoxin like 1, [RH, Score=194, Expect=8e-61]} {Mouse: ENSMUSG00000024583, Txnl1, thioredoxin-like 1, [RH, Score=192, Expect=3e-60]} {Dmel: FBgn0035631, Txl, Thioredoxin-like, [RH, Score=206, Expect=1e-65]} {Celegans: WBGene00021826, txl-1, ThioredoXin-Like; Thioredoxin-like protein; Thioredoxin-like protein TXL, [RH, Score=189, Expect=2e-59]} {Smed: dd_Smed_v6_1342_0_1, dd_Smed_v6_1342_0_1, [RH, Score=205, Expect=2e-65]} {RNA1509_17084, RNA1509_5568, RNA1509_5856} {RNA1310_17418.1, RNA1509_17084, RNA1509_5856} {RNA1509_17084, RNA1509_5856, RNA815_7479} |
| 4. | MligTC455_51698 | 365 | 7.61 | Mlig455_028928 | Neo: Irradiation Age: - Region-enriched R5: 1.818/0.00019 |
TADA1 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_028928 {REF} {Length: 3298} {Pfam: Transcriptional regulator of RNA polII, SAGA, subunit [PF12767.9, score=36.6]} {Human: ENSG00000152382, TADA1, transcriptional adaptor 1, [RH, Score=57.0, Expect=2e-08]} {Mouse: ENSMUSG00000026563, Tada1, transcriptional adaptor 1, [RH, Score=57.0, Expect=2e-08]} {RNA1509_27031, RNA1509_50645} {RNA1310_10602.1, RNA1509_27031, RNA1509_50645} {RNA1509_27031, RNA1509_50645, RNA815_2679.1} |
Berezikov Lab - 2020-2021 © ERIBA