TomoSeq data search

Data search

Results for MligTC455_51150

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_51150

1051

21.90

Mlig455_007648

Neo: -

Age: -

Region-enriched R4: 1.468/0.00043

OAT

Mlig455_007648 {REF} {Length: 2047} {TRANSSPLICED} {Pfam: Aminotransferase class-III [PF00202.23, score=387.3]} {Human: ENSG00000065154, OAT, ornithine aminotransferase, [RH, Score=593, Expect=0.0]} {Mouse: ENSMUSG00000030934, Oat, ornithine aminotransferase, [RH, Score=609, Expect=0.0]} {Dmel: FBgn0022774, Oat, Ornithine aminotransferase precursor, [RH, Score=603, Expect=0.0]} {Celegans: WBGene00015814, oatr-1, Probable ornithine aminotransferase, mitochondrial, [RH, Score=558, Expect=0.0]} {Smed: dd_Smed_v6_1896_0_1, dd_Smed_v6_1896_0_1, [RH, Score=582, Expect=0.0]} {RNA1509_16706, RNA1509_19688, RNA1509_2337, RNA1509_43033} {RNA1310_13076.1, RNA1509_16706, RNA1509_19688, RNA1509_43033} {RNA1509_16706, RNA1509_19688, RNA1509_43033, RNA815_4668}

Cumulative graph for MligTC455_51150

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.119	4.806	0.17858	0.80659
RegionR2	-0.574	4.806	0.24678	0.62408
RegionR3	0.632	4.806	0.04997	0.39067
RegionR4	1.468	4.806	0.00002	0.00043
RegionR5	0.777	4.806	0.00813	0.04964
RegionR6	-0.179	4.806	0.67772	1.00000
RegionR7	-0.121	4.806	0.82392	1.00000
RegionR8	0.116	4.806	0.84987	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.242	4.806	0.69403	1.00000
RegenerationR2	0.441	4.806	0.07838	0.45174
RegenerationR3	0.29	4.806	0.25898	0.69324
RegenerationR4	-0.04	4.806	0.87642	1.00000
RegenerationR5	0.345	4.806	0.13229	0.53980
RegenerationR6	0.953	4.806	0.00078	0.03013
RegenerationBL	0.627	4.806	0.08818	0.34798
RegenerationTP	-0.494	4.806	0.32021	0.76504

Genes with expression patterns similar to MligTC455_51150

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_51150	1051	21.9	Mlig455_007648	Neo: - Age: - Region-enriched R4: 1.468/0.00043	OAT	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_007648 {REF} {Length: 2047} {TRANSSPLICED} {Pfam: Aminotransferase class-III [PF00202.23, score=387.3]} {Human: ENSG00000065154, OAT, ornithine aminotransferase, [RH, Score=593, Expect=0.0]} {Mouse: ENSMUSG00000030934, Oat, ornithine aminotransferase, [RH, Score=609, Expect=0.0]} {Dmel: FBgn0022774, Oat, Ornithine aminotransferase precursor, [RH, Score=603, Expect=0.0]} {Celegans: WBGene00015814, oatr-1, Probable ornithine aminotransferase, mitochondrial, [RH, Score=558, Expect=0.0]} {Smed: dd_Smed_v6_1896_0_1, dd_Smed_v6_1896_0_1, [RH, Score=582, Expect=0.0]} {RNA1509_16706, RNA1509_19688, RNA1509_2337, RNA1509_43033} {RNA1310_13076.1, RNA1509_16706, RNA1509_19688, RNA1509_43033} {RNA1509_16706, RNA1509_19688, RNA1509_43033, RNA815_4668}
2.	MligTC455_43147	1029	21.43	Mlig455_027559	Neo: - Age: -	CTSC	1.832	-	-	-	-	0.873	0.959	Mlig455_027559 {REF} {Length: 2339} {TRANSSPLICED} {Pfam: Papain family cysteine protease [PF00112.25, score=214.3]; Cathepsin C exclusion domain [PF08773.13, score=113.1]; Peptidase C1-like family [PF03051.17, score=26.8]} {Human: ENSG00000109861, CTSC, cathepsin C, [RH, Score=474, Expect=1e-164]} {Mouse: ENSMUSG00000030560, Ctsc, cathepsin C, [RH, Score=436, Expect=6e-150]} {Dmel: FBgn0034709, Swim, Secreted Wg-interacting molecule, [Score=134, Expect=1e-34]} {Celegans: WBGene00000786, cpr-6, Cathepsin B-like cysteine proteinase 6, [Score=139, Expect=1e-36]} {Smed: dd_Smed_v6_219_0_1, dd_Smed_v6_219_0_1, [RH, Score=459, Expect=2e-159]} {RNA1509_4712} {RNA1310_11202.1} {RNA815_4097.1}
3.	MligTC455_47305	1024	21.33	Mlig455_066852	Neo: - Age: logFC(26M/2M)=0.614	PNPO	1.809	-	-	-	0.964	0.845	-	Mlig455_066852 {REF} {Length: 1929} {TRANSSPLICED} {Pfam: Pyridoxamine 5'-phosphate oxidase [PF01243.22, score=86.5]; Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region [PF10590.11, score=67.1]; Pyridoxamine 5'-phosphate oxidase [PF12766.9, score=29.1]} {Human: ENSG00000108439, PNPO, pyridoxamine 5'-phosphate oxidase, [RH, Score=192, Expect=2e-60]} {Mouse: ENSMUSG00000018659, Pnpo, pyridoxine 5'-phosphate oxidase, [RH, Score=191, Expect=4e-60]} {Dmel: FBgn0051472, sgll, sugarlethal, [RH, Score=184, Expect=9e-58]} {Celegans: WBGene00018996, F57B9.1, Putative pyridoxamine 5'-phosphate oxidase, [Score=181, Expect=7e-57]} {Smed: dd_Smed_v6_5086_0_1, dd_Smed_v6_5086_0_1, [RH, Score=182, Expect=2e-57]} {RNA1509_3472} {RNA1310_16067} {RNA815_7134}
4.	MligTC455_43279	970	20.21	Mlig455_034863	Neo: - Age: -		1.712	-	-	-	0.749	0.963	-	Mlig455_034863 {REF} {Length: 2744} {RNA1509_8103} {RNA1310_6457} {RNA815_11775}
5.	MligTC455_17450	3979	82.91	Mlig455_000651	Neo: - Age: -	ATP6AP1	0.968	-	-	-	0.968	-	-	Mlig455_000651 {REF} {Length: 2274} {TRANSSPLICED} {Pfam: Vacuolar ATP synthase subunit S1 (ATP6S1) [PF05827.14, score=101.0]} {Human: ENSG00000071553, ATP6AP1, ATPase H+ transporting accessory protein 1, [RH, Score=67.8, Expect=1e-11]} {Mouse: ENSMUSG00000019087, Atp6ap1, ATPase, H+ transporting, lysosomal accessory protein 1, [RH, Score=74.7, Expect=6e-14]} {Dmel: FBgn0262515, VhaAC45, Vacuolar H[+] ATPase AC45 accessory subunit, [RH, Score=65.1, Expect=4e-11]} {Celegans: WBGene00021952, vha-19, Vacuolar H ATPase, [RH, Score=59.3, Expect=2e-09]} {Smed: dd_Smed_v6_1840_0_1, dd_Smed_v6_1840_0_1, [RH, Score=82.4, Expect=9e-18]} {RNA1509_19856, RNA1509_20960, RNA1509_22291, RNA1509_32764, RNA1509_3342} {RNA1310_19246.1, RNA1509_19856, RNA1509_20960, RNA1509_22291, RNA1509_32764, RNA1509_3342} {RNA1509_19856, RNA1509_20960, RNA1509_22291, RNA1509_32764, RNA1509_3342, RNA815_15021}
6.	MligTC455_47366	2048	42.67	Mlig455_045810, Mlig455_063172	Neo: - Age: -		0.966	-	-	-	-	0.966	-	Mlig455_045810 {REF} {Length: 2481} {TRANSSPLICED} {RNA1509_29801} {RNA1310_18075.2} {RNA815_22352.1} Mlig455_063172 {REF} {Length: 2436} {TRANSSPLICED} {RNA1509_29801} {RNA1310_18075.2, RNA1509_29801} {RNA1509_29801, RNA815_22352.1}
7.	MligTC455_46957	731	15.22	Mlig455_001132, Mlig455_042045	Neo: - Age: logFC(26M/2M)=0.284		0.962	-	-	-	0.962	-	-	Mlig455_001132 {REF} {Length: 847} {TRANSSPLICED} {Pfam: 39S ribosomal protein L53/MRP-L53 [PF10780.11, score=29.1]} {Smed: dd_Smed_v6_6147_0_1, dd_Smed_v6_6147_0_1, [RH, Score=67.4, Expect=3e-15]} {RNA1509_21168, RNA1509_29421} {RNA1310_43950, RNA1509_21168, RNA1509_29421} {RNA1509_21168, RNA1509_29421, RNA815_26882} Mlig455_042045 {REF} {Length: 597} {RNA1509_21168} {RNA1310_43950} {RNA815_44645}
8.	MligTC455_50114	392	8.17	Mlig455_023521	Neo: - Age: -		0.959	-	-	-	-	0.959	-	Mlig455_023521 {REF} {Length: 3056} {TRANSSPLICED} {Pfam: Putative zinc-finger of transcription factor IIIC complex [PF12660.9, score=25.4]} {RNA1509_14184} {RNA1310_4881} {RNA815_1728.1}
9.	MligTC455_21091	1066	22.21	Mlig455_045138	Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.653	TRPM1	0.958	-	-	-	-	0.958	-	Mlig455_045138 {REF} {Length: 4149} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=64.1]; Ankyrin repeats (many copies) [PF13637.8, score=58.6]; Ankyrin repeats (many copies) [PF13857.8, score=52.1]; Ion transport protein [PF00520.33, score=47.2]; Ankyrin repeat [PF13606.8, score=38.6]; Ankyrin repeat [PF00023.32, score=35.0]} {Human: ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=161, Expect=2e-39]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=161, Expect=2e-39]; ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=154, Expect=5e-37]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=157, Expect=3e-38]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=153, Expect=5e-37]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=117, Expect=3e-26]} {Celegans: WBGene00001796, gtl-2, Gon-Two Like (TRP subfamily), [Score=82.4, Expect=1e-15]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [Score=179, Expect=9e-46]} {RNA1509_3562} {RNA1310_2118.1} {RNA815_362.1}
10.	MligTC455_42071	711	14.8	Mlig455_054503	Neo: - Age: -		0.956	-	-	-	0.956	-	-	Mlig455_054503 {REF} {Length: 1965} {TRANSSPLICED} {Pfam: N-formylglutamate amidohydrolase [PF05013.14, score=29.0]} {RNA1509_11465, RNA1509_28745} {RNA1310_15579.1, RNA1509_11465, RNA1509_28745} {RNA1509_11465, RNA1509_28745, RNA815_20172}

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