Data search


search
Exact
Search

Results for MligTC455_51255

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_51255 25 0.53 Mlig455_066831

Neo: -

Age: -

Mlig455_066831 {REF} {Length: 309} {NoTransDecoderORF} {RNA1509_9814} {RNA1310_45195} {RNA815_54809}

Cumulative graph for MligTC455_51255

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.104 0.708 0.99998 1.00000
RegionR2 1.823 0.708 0.99994 1.00000
RegionR3 -0.107 0.708 1.00000 1.00000
RegionR4 -2.272 0.708 0.99987 1.00000
RegionR5 -1.182 0.708 0.99997 1.00000
RegionR6 -0.63 0.708 1.00000 1.00000
RegionR7 1.164 0.708 0.99998 1.00000
RegionR8 2.308 0.708 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.188 0.708 1.00000 1.00000
RegenerationR2 0.444 0.708 1.00000 1.00000
RegenerationR3 1.908 0.708 1.00000 1.00000
RegenerationR4 1.138 0.708 0.99961 1.00000
RegenerationR5 1.553 0.708 0.99966 1.00000
RegenerationR6 2.917 0.708 0.99974 1.00000
RegenerationBL -2.543 0.708 0.99954 1.00000
RegenerationTP -1.569 0.708 0.99996 1.00000


Genes with expression patterns similar to MligTC455_51255

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_51255 25 0.53 Mlig455_066831

Neo: -

Age: -

1 - - - - 1.000 - Mlig455_066831 {REF} {Length: 309} {NoTransDecoderORF} {RNA1509_9814} {RNA1310_45195} {RNA815_54809}
2. MligTC455_17497 4275 89.06 Mlig455_005291

Neo: -

Age: -

SLC25A21 0.985 - - - - 0.985 - Mlig455_005291 {REF} {Length: 2346} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=188.8]} {Human: ENSG00000183032, SLC25A21, solute carrier family 25 member 21, [RH, Score=318, Expect=8e-103]} {Mouse: ENSMUSG00000035472, Slc25a21, solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21, [RH, Score=306, Expect=2e-98]} {Dmel: FBgn0040383, CG5254, [RH, Score=292, Expect=3e-93]} {Celegans: WBGene00011226, slc-25A21, SLC (SoLute Carrier) homolog, [RH, Score=256, Expect=8e-80]} {Smed: dd_Smed_v6_1662_0_1, dd_Smed_v6_1662_0_1, [Score=86.7, Expect=2e-18]} {RNA1509_4652} {RNA1310_19382} {RNA815_8848}
3. MligTC455_17496 1605 33.45 Mlig455_004985

Neo: -

Age: logFC(26M/2M)=0.314

SLC25A21 0.959 - - - - 0.959 - Mlig455_004985 {REF} {Length: 2105} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=55.4]} {Human: ENSG00000183032, SLC25A21, solute carrier family 25 member 21, [Score=112, Expect=5e-27]} {Mouse: ENSMUSG00000035472, Slc25a21, solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21, [Score=114, Expect=6e-28]} {Dmel: FBgn0040383, CG5254, [Score=114, Expect=1e-28]} {Celegans: WBGene00011226, slc-25A21, SLC (SoLute Carrier) homolog, [Score=94.4, Expect=2e-21]} {Smed: dd_Smed_v6_8768_0_1, dd_Smed_v6_8768_0_1, [Score=54.3, Expect=6e-08]} {RNA1509_12813, RNA1509_18164} {RNA1310_19382, RNA1509_18164} {RNA1509_18164, RNA815_8848}
4. MligTC455_22483 40 0.84 Mlig455_002638

Neo: -

Age: -

0.953 - - - - 0.953 - Mlig455_002638 {REF} {Length: 725} {RNA1509_32404} {RNA1310_54013.1} {RNA815_47584}
5. MligTC455_39610 1457 30.36 Mlig455_029565, Mlig455_040446

Neo: -

Age: -

ABLIM1 0.951 - - - - 0.951 -

Mlig455_029565 {REF} {Length: 3783} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=75.2]; Villin headpiece domain [PF02209.21, score=43.0]} {Human: ENSG00000099204, ABLIM1, actin binding LIM protein 1, [RH, Score=139, Expect=3e-34]; ENSG00000163995, ABLIM2, actin binding LIM protein family member 2, [RH, Score=139, Expect=3e-34]} {Mouse: ENSMUSG00000025085, Ablim1, actin-binding LIM protein 1, [RH, Score=139, Expect=2e-34]; ENSMUSG00000029095, Ablim2, actin-binding LIM protein 2, [RH, Score=134, Expect=5e-33]} {Dmel: FBgn0051352, Unc-115a, Uncoordinated 115a, [RH, Score=136, Expect=2e-33]} {Celegans: WBGene00006839, unc-115, Putative actin-binding protein UNC-115, [Score=74.3, Expect=8e-14]} {Smed: dd_Smed_v6_8089_0_1, dd_Smed_v6_8089_0_1, [RH, Score=175, Expect=7e-48]} {RNA1509_9268} {RNA1310_6174} {RNA815_1510}

Mlig455_040446 {REF} {Length: 4243} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=75.2]; Villin headpiece domain [PF02209.21, score=43.0]} {Human: ENSG00000099204, ABLIM1, actin binding LIM protein 1, [RH, Score=139, Expect=4e-34]; ENSG00000163995, ABLIM2, actin binding LIM protein family member 2, [RH, Score=139, Expect=3e-34]} {Mouse: ENSMUSG00000025085, Ablim1, actin-binding LIM protein 1, [RH, Score=139, Expect=3e-34]; ENSMUSG00000029095, Ablim2, actin-binding LIM protein 2, [RH, Score=134, Expect=5e-33]} {Dmel: FBgn0260463, Unc-115b, Uncoordinated 115b, [RH, Score=136, Expect=2e-33]} {Celegans: WBGene00006839, unc-115, Putative actin-binding protein UNC-115, [Score=74.7, Expect=8e-14]} {Smed: dd_Smed_v6_8089_0_1, dd_Smed_v6_8089_0_1, [RH, Score=176, Expect=3e-48]} {RNA1509_9268} {RNA1310_6174} {RNA815_1510}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA