M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_51296

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_51296 930 19.38 Mlig455_007424, Mlig455_067673

Neo: Irradiation

Age: -

Mlig455_007424 {REF} {Length: 2188} {TRANSSPLICED} {RNA1509_54556} {RNA1310_38446.3} {RNA815_32837}

Mlig455_067673 {REF} {Length: 2422} {TRANSSPLICED} {RNA1509_54556} {RNA1310_38446.1, RNA1509_54556} {RNA1509_54556, RNA815_32333}

Cumulative graph for MligTC455_51296

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.477 4.477 0.62486 1.00000
RegionR2 0.333 4.477 0.54219 0.90962
RegionR3 0.106 4.477 0.81164 1.00000
RegionR4 -0.285 4.477 0.58452 0.90031
RegionR5 1.014 4.477 0.01056 0.06011
RegionR6 -0.144 4.477 0.75623 1.00000
RegionR7 -0.566 4.477 0.29690 0.93185
RegionR8 0.019 4.477 0.97342 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.87 4.477 0.09349 0.80177
RegenerationR2 0.594 4.477 0.24446 0.69216
RegenerationR3 0.139 4.477 0.80351 0.98344
RegenerationR4 0.421 4.477 0.46153 0.84814
RegenerationR5 0.068 4.477 0.89548 1.00000
RegenerationR6 0.922 4.477 0.09706 0.38745
RegenerationBL 1.362 4.477 0.00953 0.09786
RegenerationTP 0.455 4.477 0.46097 0.87464


Genes with expression patterns similar to MligTC455_51296

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_51296 930 19.38 Mlig455_007424, Mlig455_067673

Neo: Irradiation

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_007424 {REF} {Length: 2188} {TRANSSPLICED} {RNA1509_54556} {RNA1310_38446.3} {RNA815_32837}

Mlig455_067673 {REF} {Length: 2422} {TRANSSPLICED} {RNA1509_54556} {RNA1310_38446.1, RNA1509_54556} {RNA1509_54556, RNA815_32333}
2. MligTC455_42679 1362 28.37 Mlig455_034910

Neo: -

Age: Down-Up-Down

 2.539 - - 0.782 0.785 - 0.972 Mlig455_034910 {REF} {Length: 1350} {NoTransDecoderORF} {RNA1509_38066, RNA1509_46870} {RNA1310_24331.1, RNA1509_38066, RNA1509_46870} {RNA1509_38066, RNA1509_46870, RNA815_10810.1}
3. MligTC455_42680 1410 29.37 Mlig455_057043

Neo: -

Age: -

 1.728 - - - 0.768 - 0.960 Mlig455_057043 {REF} {Length: 1934} {NoTransDecoderORF} {RNA1509_20619} {RNA1310_24331.1} {RNA815_10810.1}
4. MligTC455_46979 393 8.19 Mlig455_006015

Neo: -

Age: -

Region-enriched R5: 2.218/0.00021

 SLC25A51 1.662 - 0.706 - - - 0.956 Mlig455_006015 {REF} {Length: 2639} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=119.4]} {Human: ENSG00000122696, SLC25A51, solute carrier family 25 member 51, [RH, Score=213, Expect=1e-67]} {Mouse: ENSMUSG00000045973, Slc25a51, solute carrier family 25, member 51, [RH, Score=208, Expect=1e-65]} {Dmel: FBgn0039741, CG7943, [RH, Score=173, Expect=6e-52]} {Celegans: WBGene00011858, T20D3.5, [RH, Score=142, Expect=1e-41]} {Smed: dd_Smed_v6_8610_0_1, dd_Smed_v6_8610_0_1, [RH, Score=186, Expect=7e-58]} {RNA1509_15551, RNA1509_34914, RNA1509_51591, RNA1509_53073} {RNA1310_23947, RNA1509_15551, RNA1509_34914, RNA1509_51591, RNA1509_53073} {RNA1509_15551, RNA1509_34914, RNA1509_51591, RNA1509_53073, RNA815_5386}
5. MligTC455_03374 658 13.71 Mlig455_032650

Neo: -

Age: -

 PPP3CA 0.974 - - - - - 0.974 Mlig455_032650 {REF} {Length: 4868} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=82.4]; EF-hand domain pair [PF13499.8, score=34.9]; EF-hand domain [PF13405.8, score=30.9]; EF hand [PF00036.34, score=28.3]; EF-hand domain pair [PF13833.8, score=24.9]} {Human: ENSG00000138814, PPP3CA, protein phosphatase 3 catalytic subunit alpha, [Score=169, Expect=4e-44]; ENSG00000107758, PPP3CB, protein phosphatase 3 catalytic subunit beta, [Score=167, Expect=1e-43]; ENSG00000172531, PPP1CA, protein phosphatase 1 catalytic subunit alpha, [Score=165, Expect=3e-44]; ENSG00000120910, PPP3CC, protein phosphatase 3 catalytic subunit gamma, [Score=162, Expect=6e-42]; ENSG00000104695, PPP2CB, protein phosphatase 2 catalytic subunit beta, [Score=162, Expect=9e-44]; ENSG00000186298, PPP1CC, protein phosphatase 1 catalytic subunit gamma, [Score=161, Expect=3e-43]} {Mouse: ENSMUSG00000028161, Ppp3ca, protein phosphatase 3, catalytic subunit, alpha isoform, [Score=169, Expect=2e-44]; ENSMUSG00000021816, Ppp3cb, protein phosphatase 3, catalytic subunit, beta isoform, [Score=167, Expect=1e-43]; ENSMUSG00000022092, Ppp3cc, protein phosphatase 3, catalytic subunit, gamma isoform, [Score=166, Expect=4e-43]; ENSMUSG00000009630, Ppp2cb, protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform, [Score=162, Expect=6e-44]; ENSMUSG00000004455, Ppp1cc, protein phosphatase 1 catalytic subunit gamma, [Score=161, Expect=2e-43]; ENSMUSG00000096994, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=161, Expect=3e-43]; ENSMUSG00000040385, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=161, Expect=3e-43]} {Dmel: FBgn0010015, CanA1, Calcineurin A1, [Score=171, Expect=2e-44]} {Celegans: WBGene00006527, tax-6, Serine/threonine-protein phosphatase 2B catalytic subunit, [Score=165, Expect=8e-44]} {Smed: dd_Smed_v6_10205_0_1, dd_Smed_v6_10205_0_1, [RH, Score=394, Expect=3e-123]} {RNA1509_57815} {RNA1310_2604} {RNA815_2529.1}
6. MligTC455_04105 260 5.43 Mlig455_029081

Neo: Int S/G2/M

Age: -

Region-enriched R5: 2.109/0.00002

 TMEM201 0.973 - - 0.973 - - - Mlig455_029081 {REF} {Length: 3167} {TRANSSPLICED} {Pfam: Ima1 N-terminal domain [PF09779.11, score=111.3]} {Human: ENSG00000188807, TMEM201, transmembrane protein 201, [RH, Score=129, Expect=1e-30]} {Mouse: ENSMUSG00000044700, Tmem201, transmembrane protein 201, [RH, Score=131, Expect=1e-31]} {Dmel: FBgn0034447, CG7744, [RH, Score=124, Expect=3e-29]} {Celegans: WBGene00011994, samp-1, Spindle Associated Membrane Protein homolog, [RH, Score=98.6, Expect=2e-21]} {Smed: dd_Smed_v6_17198_0_1, dd_Smed_v6_17198_0_1, [RH, Score=103, Expect=8e-25]} {RNA1509_19432, RNA1509_46930} {RNA1310_12592, RNA1509_46930} {RNA1509_46930, RNA815_559.1}
7. MligTC455_28092 232 4.84 Mlig455_016454

Neo: -

Age: -

 ZNF91 0.973 - - - - - 0.973 Mlig455_016454 {REF} {Length: 5410} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=411.4]; Zinc finger, C2H2 type [PF00096.28, score=296.8]; C2H2-type zinc finger [PF13894.8, score=216.3]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=133.3]; Zinc-finger of C2H2 type [PF12874.9, score=111.7]; C2H2-type zinc finger [PF13912.8, score=45.4]; Family of unknown function (DUF5810) [PF19126.2, score=23.3]; C2H2-type zinc-finger domain [PF13909.8, score=21.3]; zinc-finger C2H2-type [PF16622.7, score=18.8]} {Human: ENSG00000167232, ZNF91, zinc finger protein 91, [Score=488, Expect=1e-154]; ENSG00000160321, ZNF208, zinc finger protein 208, [Score=482, Expect=1e-151]} {Mouse: ENSMUSG00000021510, Zfp729a, zinc finger protein 729a, [Score=426, Expect=1e-133]; ENSMUSG00000078877, Gm14295, predicted gene 14295, [Score=426, Expect=3e-135]; ENSMUSG00000058093, Zfp729b, zinc finger protein 729b, [Score=422, Expect=2e-131]; ENSMUSG00000068959, Zfp619, zinc finger protein 619, [Score=405, Expect=3e-124]} {Dmel: FBgn0020309, crol, crooked legs, [Score=245, Expect=3e-68]} {Celegans: WBGene00021931, Y55F3AM.14, [Score=154, Expect=1e-38]} {Smed: dd_Smed_v6_8871_0_1, dd_Smed_v6_8871_0_1, [Score=142, Expect=3e-34]} {RNA1509_58288} {RNA1310_6381} {RNA815_979}
8. MligTC455_15652 180 3.76 Mlig455_061558

Neo: -

Age: -

 DSTYK 0.972 - - - - - 0.972 Mlig455_061558 {REF} {Length: 3912} {Pfam: Protein kinase domain [PF00069.27, score=113.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=106.5]; Fungal protein kinase [PF17667.3, score=18.5]} {Human: ENSG00000133059, DSTYK, dual serine/threonine and tyrosine protein kinase, [Score=612, Expect=0.0]} {Mouse: ENSMUSG00000042046, Dstyk, dual serine/threonine and tyrosine protein kinase, [Score=609, Expect=0.0]} {Dmel: FBgn0259680, Pkcdelta, Protein kinase C delta, [Score=81.6, Expect=2e-15]} {Celegans: WBGene00006941, wnk-1, Serine/threonine-protein kinase WNK, [Score=78.6, Expect=1e-14]} {Smed: dd_Smed_v6_4436_0_1, dd_Smed_v6_4436_0_1, [Score=531, Expect=3e-175]} {RNA1509_38687, RNA1509_51957} {RNA1310_22897, RNA1509_38687, RNA1509_51957} {RNA1509_38687, RNA1509_51957, RNA815_9862}
9. MligTC455_24766 483 10.06 Mlig455_054542, Mlig455_055396

Neo: -

Age: -

 0.97 - - - - - 0.970

Mlig455_054542 {REF} {Length: 1225} {NoTransDecoderORF} {RNA1509_54832} {RNA1310_53640.1} {RNA815_37039}

Mlig455_055396 {REF} {Length: 893} {NoTransDecoderORF} {RNA1509_54832} {RNA1310_53640.1, RNA1509_54832} {RNA1509_54832, RNA815_36040}
10. MligTC455_04401 1087 22.65 Mlig455_044908, Mlig455_044962, Mlig455_055542

Neo: -

Age: -

Region-enriched R4: 1.584/0.03336

 ARID4A 0.968 - - - - - 0.968

Mlig455_044908 {REF} {Length: 4846} {Pfam: RBB1NT (NUC162) domain [PF08169.13, score=65.4]; ARID/BRIGHT DNA binding domain [PF01388.23, score=55.9]; RNA binding activity-knot of a chromodomain [PF11717.10, score=21.2]; PWWP domain [PF00855.19, score=19.2]} {Human: ENSG00000032219, ARID4A, AT-rich interaction domain 4A, [RH, Score=151, Expect=2e-36]} {Mouse: ENSMUSG00000048118, Arid4a, AT rich interactive domain 4A (RBP1-like), [RH, Score=151, Expect=1e-36]} {Dmel: FBgn0085451, htk, hat-trick, [RH, Score=152, Expect=9e-37]} {Celegans: WBGene00044689, arid-1, ARID (AT-rich Interactive Domain-containing protein) homolog, [RH, Score=117, Expect=3e-26]} {Smed: dd_Smed_v6_4030_0_1, dd_Smed_v6_4030_0_1, [RH, Score=175, Expect=3e-44]} {RNA1509_58139} {RNA1310_1285.1} {RNA815_23299}

Mlig455_044962 {REF} {Length: 712} {Pfam: RBB1NT (NUC162) domain [PF08169.13, score=37.6]} {RNA1509_58139} {RNA1310_1285.1} {RNA815_21886}

Mlig455_055542 {REF} {Length: 4763} {TRANSSPLICED} {Pfam: ARID/BRIGHT DNA binding domain [PF01388.23, score=75.5]; RBB1NT (NUC162) domain [PF08169.13, score=65.4]; RNA binding activity-knot of a chromodomain [PF11717.10, score=21.3]; PWWP domain [PF00855.19, score=19.1]} {Human: ENSG00000032219, ARID4A, AT-rich interaction domain 4A, [RH, Score=150, Expect=5e-36]} {Mouse: ENSMUSG00000048118, Arid4a, AT rich interactive domain 4A (RBP1-like), [RH, Score=150, Expect=4e-36]} {Dmel: FBgn0085451, htk, hat-trick, [RH, Score=159, Expect=7e-39]} {Celegans: WBGene00044689, arid-1, ARID (AT-rich Interactive Domain-containing protein) homolog, [RH, Score=119, Expect=8e-27]} {Smed: dd_Smed_v6_4030_0_1, dd_Smed_v6_4030_0_1, [RH, Score=206, Expect=4e-54]} {RNA1509_58139} {RNA1310_1285.1} {RNA815_21886}
11. MligTC455_30260 338 7.04 Mlig455_030544

Neo: -

Age: -

 ADAM17 0.968 - - 0.968 - - - Mlig455_030544 {REF} {Length: 4293} {Pfam: Metallo-peptidase family M12 [PF13688.8, score=87.6]; Metallo-peptidase family M12B Reprolysin-like [PF13574.8, score=73.2]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=34.6]; Membrane-proximal domain, switch, for ADAM17 [PF16698.7, score=32.9]; Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=28.7]; Reprolysin family propeptide [PF01562.21, score=23.6]} {Human: ENSG00000151694, ADAM17, ADAM metallopeptidase domain 17, [RH, Score=342, Expect=4e-105]} {Mouse: ENSMUSG00000052593, Adam17, a disintegrin and metallopeptidase domain 17, [RH, Score=340, Expect=1e-104]} {Dmel: FBgn0039734, Tace, [RH, Score=291, Expect=1e-87]} {Celegans: WBGene00000075, adm-4, ADAM (Disintegrin plus metalloprotease) family, [RH, Score=202, Expect=2e-55]} {Smed: dd_Smed_v6_2341_0_2, dd_Smed_v6_2341_0_2, [Score=124, Expect=3e-29]} {RNA1509_15132} {RNA1310_5685, RNA1509_15132} {RNA1509_15132, RNA815_5678}
12. MligTC455_18715 178 3.71 Mlig455_053389

Neo: -

Age: logFC(26M/2M)=0.210

 NLE1 0.966 - - - - - 0.966 Mlig455_053389 {REF} {Length: 3868} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=172.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=66.4]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=30.9]; Variant SH3 domain [PF14604.8, score=30.2]; SH3 domain [PF00018.30, score=29.7]; WD40-like Beta Propeller Repeat [PF07676.14, score=24.9]} {Human: ENSG00000073536, NLE1, notchless homolog 1, [RH, Score=555, Expect=0.0]} {Mouse: ENSMUSG00000020692, Nle1, notchless homolog 1, [RH, Score=552, Expect=0.0]} {Dmel: FBgn0021874, Nle, Notchless, [RH, Score=487, Expect=6e-164]} {Celegans: WBGene00021074, W07E6.2, [RH, Score=506, Expect=1e-171]} {Smed: dd_Smed_v6_10113_0_1, dd_Smed_v6_10113_0_1, [RH, Score=415, Expect=2e-135]} {RNA1509_10089, RNA1509_59623} {RNA1310_18226.1, RNA1509_59623} {RNA1509_59623, RNA815_6966}
13. MligTC455_32810 1118 23.3 Mlig455_053373

Neo: -

Age: -

 WLS 0.966 - - - - - 0.966 Mlig455_053373 {REF} {Length: 3703} {TRANSSPLICED} {Pfam: Wnt-binding factor required for Wnt secretion [PF06664.14, score=249.2]} {Human: ENSG00000116729, WLS, wntless Wnt ligand secretion mediator, [RH, Score=404, Expect=4e-134]} {Mouse: ENSMUSG00000028173, Wls, wntless WNT ligand secretion mediator, [RH, Score=396, Expect=2e-131]} {Dmel: FBgn0036141, wls, wntless, [RH, Score=400, Expect=9e-133]} {Celegans: WBGene00003246, mig-14, Protein wntless homolog, [RH, Score=309, Expect=6e-98]} {Smed: dd_Smed_v6_9546_0_1, dd_Smed_v6_9546_0_1, [RH, Score=325, Expect=1e-105]} {RNA1509_11679, RNA1509_47528} {RNA1310_8508, RNA1509_11679, RNA1509_47528} {RNA1509_11679, RNA1509_47528, RNA815_6300}
14. MligTC455_37520 468 9.75 Mlig455_067442

Neo: -

Age: Up-Down-Down

 PAXIP1 0.966 - - - - - 0.966 Mlig455_067442 {REF} {Length: 6041} {Pfam: BRCA1 C Terminus (BRCT) domain [PF00533.28, score=112.3]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=94.4]; twin BRCT domain [PF12738.9, score=79.2]; DNA ligase 3 BRCT domain [PF16759.7, score=34.1]; Regulator of Ty1 transposition protein 107 BRCT domain [PF16770.7, score=29.9]; BRCA1 C Terminus (BRCT) domain [PF18428.3, score=27.0]} {Human: ENSG00000157212, PAXIP1, PAX interacting protein 1, [RH, Score=96.7, Expect=3e-19]} {Mouse: ENSMUSG00000002221, Paxip1, PAX interacting (with transcription-activation domain) protein 1, [Score=94.0, Expect=1e-18]} {Dmel: FBgn0052133, Ptip, PAX transcription activation domain interacting protein, [RH, Score=139, Expect=1e-32]} {Celegans: WBGene00004031, pis-1, PIS (Pax-2, IA-1/6, Smad-2 interacting protein) homolog, [RH, Score=119, Expect=8e-27]} {Smed: dd_Smed_v6_5269_0_1, dd_Smed_v6_5269_0_1, [RH, Score=238, Expect=5e-64]} {RNA1509_6159} {RNA1310_800.1, RNA1509_6159} {RNA1509_6159, RNA815_1449}
15. MligTC455_38529 1340 27.92 Mlig455_054388

Neo: -

Age: Up-Down-Down

 SMARCA4 0.966 - - - - - 0.966 Mlig455_054388 {REF} {Length: 6972} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=260.7]; Helicase conserved C-terminal domain [PF00271.33, score=74.3]; Bromodomain [PF00439.27, score=70.1]; Snf2-ATP coupling, chromatin remodelling complex [PF14619.8, score=53.3]; HSA [PF07529.15, score=47.6]; BRK domain [PF07533.18, score=44.2]; Type III restriction enzyme, res subunit [PF04851.17, score=40.7]} {Human: ENSG00000127616, SMARCA4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [RH, Score=1372, Expect=0.0]; ENSG00000080503, SMARCA2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [RH, Score=1358, Expect=0.0]} {Mouse: ENSMUSG00000032187, Smarca4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [RH, Score=1376, Expect=0.0]; ENSMUSG00000024921, Smarca2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [RH, Score=1361, Expect=0.0]} {Dmel: FBgn0000212, brm, brahma, [RH, Score=1329, Expect=0.0]} {Celegans: WBGene00004204, swsn-4, SWI/SNF nucleosome remodeling complex component; SWI2/SNF2-like protein, [RH, Score=1174, Expect=0.0]} {Smed: dd_Smed_v6_4141_0_1, dd_Smed_v6_4141_0_1, [RH, Score=1345, Expect=0.0]} {RNA1509_12159, RNA1509_2390} {RNA1310_337.1, RNA1509_12159, RNA1509_2390} {RNA1509_12159, RNA1509_2390, RNA815_1095.1}
16. MligTC455_53474 1252 26.08 Mlig455_036568

Neo: -

Age: logFC(26M/2M)=0.466

 TLE1 0.966 - - - - - 0.966 Mlig455_036568 {REF} {Length: 3871} {Pfam: Groucho/TLE N-terminal Q-rich domain [PF03920.17, score=184.3]; WD domain, G-beta repeat [PF00400.34, score=68.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=43.6]} {Human: ENSG00000196781, TLE1, transducin like enhancer of split 1, [Score=566, Expect=0.0]; ENSG00000106829, TLE4, transducin like enhancer of split 4, [Score=565, Expect=0.0]; ENSG00000140332, TLE3, transducin like enhancer of split 3, [Score=563, Expect=0.0]; ENSG00000065717, TLE2, transducin like enhancer of split 2, [Score=546, Expect=0.0]} {Mouse: ENSMUSG00000024642, Tle4, transducin-like enhancer of split 4, [Score=565, Expect=0.0]; ENSMUSG00000008305, Tle1, transducin-like enhancer of split 1, [Score=565, Expect=0.0]; ENSMUSG00000032280, Tle3, transducin-like enhancer of split 3, [Score=563, Expect=0.0]; ENSMUSG00000034771, Tle2, transducin-like enhancer of split 2, [Score=542, Expect=0.0]} {Dmel: FBgn0001139, gro, groucho, [Score=570, Expect=0.0]} {Celegans: WBGene00006773, unc-37, Transcription factor unc-37, [Score=406, Expect=1e-131]} {Smed: dd_Smed_v6_4112_0_1, dd_Smed_v6_4112_0_1, [Score=668, Expect=0.0]} {RNA1509_4766} {RNA1310_6051} {RNA815_7108.1}
17. MligTC455_17708 297 6.19 Mlig455_067350

Neo: -

Age: -

 SIN3B 0.965 - - - - - 0.965 Mlig455_067350 {REF} {Length: 6212} {TRANSSPLICED} {Pfam: C-terminal domain of Sin3a protein [PF16879.7, score=140.7]; Paired amphipathic helix repeat [PF02671.23, score=115.5]; Sin3 family co-repressor [PF08295.14, score=111.5]} {Human: ENSG00000127511, SIN3B, SIN3 transcription regulator family member B, [RH, Score=500, Expect=1e-153]} {Mouse: ENSMUSG00000031622, Sin3b, transcriptional regulator, SIN3B (yeast), [RH, Score=507, Expect=1e-156]} {Dmel: FBgn0022764, Sin3A, [RH, Score=302, Expect=9e-83]} {Celegans: WBGene00004117, sin-3, Paired amphipathic helix protein sin-3, [RH, Score=113, Expect=9e-25]} {Smed: dd_Smed_v6_7034_0_1, dd_Smed_v6_7034_0_1, [RH, Score=310, Expect=3e-86]} {RNA1509_12438} {RNA1310_4111, RNA1509_12438} {RNA1509_12438, RNA815_5481}
18. MligTC455_38530 1335 27.82 Mlig455_054413

Neo: -

Age: Up-Down-Down

 SMARCA4 0.965 - - - - - 0.965 Mlig455_054413 {REF} {Length: 3280} {Pfam: Helicase conserved C-terminal domain [PF00271.33, score=58.7]; Snf2-ATP coupling, chromatin remodelling complex [PF14619.8, score=55.1]} {Human: ENSG00000127616, SMARCA4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [Score=342, Expect=2e-107]; ENSG00000080503, SMARCA2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [Score=326, Expect=2e-99]} {Mouse: ENSMUSG00000032187, Smarca4, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, [Score=339, Expect=4e-104]; ENSMUSG00000024921, Smarca2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, [Score=327, Expect=1e-99]} {Dmel: FBgn0000212, brm, brahma, [Score=275, Expect=8e-82]} {Celegans: WBGene00004204, swsn-4, SWI/SNF nucleosome remodeling complex component; SWI2/SNF2-like protein, [Score=258, Expect=7e-76]} {Smed: dd_Smed_v6_4141_0_1, dd_Smed_v6_4141_0_1, [Score=291, Expect=2e-87]} {RNA1509_2390} {RNA1310_6889} {RNA815_8843}
19. MligTC455_04400 540 11.25 Mlig455_044960

Neo: -

Age: -

Region-enriched R4: 1.699/0.02809

 0.964 - - - - - 0.964 Mlig455_044960 {REF} {Length: 740} {NoTransDecoderORF} {RNA1509_58139} {RNA1310_1285.1} {RNA815_30346}
20. MligTC455_22774 156 3.25 Mlig455_045395

Neo: -

Age: -

Region-enriched R5: 2.504/0.00000

 0.964 - - 0.964 - - - Mlig455_045395 {REF} {Length: 3099} {Mouse: ENSMUSG00000030878, Cdr2, cerebellar degeneration-related 2, [Score=48.9, Expect=5e-06]} {Dmel: FBgn0032876, Cen, Centrocortin, [Score=64.7, Expect=4e-11]} {Smed: dd_Smed_v6_3478_0_1, dd_Smed_v6_3478_0_1, [Score=61.2, Expect=2e-10]} {RNA1310_40607} {RNA815_42744}
21. MligTC455_29553 1248 26 Mlig455_050551, Mlig455_050581

Neo: -

Age: -

 AXIN1, AXIN2 0.964 - - - - - 0.964

Mlig455_050551 {REF} {Length: 6098} {TRANSSPLICED} {Pfam: DIX domain [PF00778.19, score=91.6]; Regulator of G protein signaling domain [PF00615.21, score=48.8]} {Human: ENSG00000168646, AXIN2, axin 2, [Score=140, Expect=6e-34]} {Mouse: ENSMUSG00000000142, Axin2, axin 2, [RH, Score=137, Expect=5e-33]} {Dmel: FBgn0026597, Axn, Axin, [RH, Score=76.6, Expect=4e-14]} {Smed: dd_Smed_v6_5818_0_1, dd_Smed_v6_5818_0_1, [RH, Score=105, Expect=9e-25]} {RNA1509_28626, RNA1509_7697} {RNA1310_4452, RNA1509_28626, RNA1509_7697} {RNA1509_28626, RNA1509_7697, RNA815_11377}

Mlig455_050581 {REF} {Length: 4670} {TRANSSPLICED} {Pfam: DIX domain [PF00778.19, score=91.6]; Regulator of G protein signaling domain [PF00615.21, score=48.8]} {Human: ENSG00000103126, AXIN1, axin 1, [RH, Score=103, Expect=4e-22]} {Mouse: ENSMUSG00000000142, Axin2, axin 2, [RH, Score=140, Expect=7e-34]} {Dmel: FBgn0026597, Axn, Axin, [RH, Score=76.6, Expect=4e-14]} {Smed: dd_Smed_v6_5818_0_1, dd_Smed_v6_5818_0_1, [RH, Score=105, Expect=1e-24]} {RNA1509_7697} {RNA1310_4452} {RNA815_11377}
22. MligTC455_36451 93 1.94 Mlig455_019217

Neo: -

Age: -

 FBXW7 0.964 - - - - - 0.964 Mlig455_019217 {REF} {Length: 2707} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=132.2]; F-box-like [PF12937.9, score=48.0]; F-box domain [PF00646.35, score=32.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=23.4]; Nucleoporin Nup120/160 [PF11715.10, score=22.5]} {Human: ENSG00000109670, FBXW7, F-box and WD repeat domain containing 7, [RH, Score=430, Expect=5e-143]} {Mouse: ENSMUSG00000028086, Fbxw7, F-box and WD-40 domain protein 7, [RH, Score=429, Expect=8e-143]} {Dmel: FBgn0041171, ago, archipelago, [RH, Score=415, Expect=2e-131]} {Celegans: WBGene00004767, sel-10, F-box/WD repeat-containing protein sel-10, [RH, Score=310, Expect=3e-98]} {Smed: dd_Smed_v6_8211_0_1, dd_Smed_v6_8211_0_1, [RH, Score=280, Expect=1e-88]} {RNA1509_19180, RNA1509_52969} {RNA1310_4381, RNA1509_19180, RNA1509_52969} {RNA1509_19180, RNA1509_52969, RNA815_6050}
23. MligTC455_53475 1013 21.1 Mlig455_057783

Neo: -

Age: -

 TLE4 0.963 - - - - - 0.963 Mlig455_057783 {REF} {Length: 3860} {Pfam: Groucho/TLE N-terminal Q-rich domain [PF03920.17, score=184.3]; WD domain, G-beta repeat [PF00400.34, score=68.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=43.7]} {Human: ENSG00000106829, TLE4, transducin like enhancer of split 4, [Score=566, Expect=0.0]; ENSG00000196781, TLE1, transducin like enhancer of split 1, [Score=566, Expect=0.0]; ENSG00000140332, TLE3, transducin like enhancer of split 3, [Score=563, Expect=0.0]; ENSG00000065717, TLE2, transducin like enhancer of split 2, [Score=547, Expect=0.0]} {Mouse: ENSMUSG00000034771, Tle2, transducin-like enhancer of split 2, [RH, Score=543, Expect=0.0]} {Dmel: FBgn0001139, gro, groucho, [Score=570, Expect=0.0]} {Celegans: WBGene00006773, unc-37, Transcription factor unc-37, [Score=405, Expect=2e-131]} {Smed: dd_Smed_v6_4112_0_1, dd_Smed_v6_4112_0_1, [Score=665, Expect=0.0]} {RNA1509_4766} {RNA1310_6051} {RNA815_7108.1}
24. MligTC455_32984 88 1.83 Mlig455_059032, Mlig455_070849

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=-0.597

 HIST2H2AC 0.961 - - 0.961 - - -

Mlig455_059032 {REF} {Length: 1259} {Pfam: C-terminus of histone H2A [PF16211.7, score=68.2]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=55.7]; Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=24.1]} {Human: ENSG00000184260, HIST2H2AC, histone cluster 2 H2A family member c, [RH, Score=221, Expect=1e-75]; ENSG00000184270, HIST2H2AB, histone cluster 2 H2A family member b, [RH, Score=220, Expect=2e-75]; ENSG00000275221, HIST1H2AK, histone cluster 1 H2A family member k, [RH, Score=220, Expect=3e-75]; ENSG00000274997, HIST1H2AH, histone cluster 1 H2A family member h, [RH, Score=220, Expect=2e-75]; ENSG00000196787, HIST1H2AG, histone cluster 1 H2A family member g, [RH, Score=220, Expect=3e-75]; ENSG00000203812, HIST2H2AA3, histone cluster 2 H2A family member a3, [RH, Score=220, Expect=2e-75]; ENSG00000276368, HIST1H2AJ, histone cluster 1 H2A family member j, [RH, Score=220, Expect=2e-75]; ENSG00000272196, HIST2H2AA4, histone cluster 2 H2A family member a4, [RH, Score=220, Expect=2e-75]; ENSG00000278677, HIST1H2AM, histone cluster 1 H2A family member m, [RH, Score=220, Expect=3e-75]; ENSG00000276903, HIST1H2AL, histone cluster 1 H2A family member l, [RH, Score=220, Expect=3e-75]; ENSG00000196747, HIST1H2AI, histone cluster 1 H2A family member i, [RH, Score=220, Expect=3e-75]; ENSG00000164508, HIST1H2AA, histone cluster 1 H2A family member a, [RH, Score=220, Expect=3e-75]; ENSG00000282988, AL031777.3, novel protein, [RH, Score=219, Expect=2e-74]; ENSG00000246705, H2AFJ, H2A histone family member J, [RH, Score=219, Expect=6e-75]; ENSG00000277075, HIST1H2AE, histone cluster 1 H2A family member e, [RH, Score=219, Expect=1e-74]; ENSG00000278463, HIST1H2AB, histone cluster 1 H2A family member b, [RH, Score=219, Expect=1e-74]; ENSG00000196866, HIST1H2AD, histone cluster 1 H2A family member d, [RH, Score=219, Expect=6e-75]; ENSG00000188486, H2AFX, H2A histone family member X, [RH, Score=218, Expect=2e-74]; ENSG00000180573, HIST1H2AC, histone cluster 1 H2A family member c, [RH, Score=218, Expect=1e-74]; ENSG00000284841, HIST3H2A, histone cluster 3 H2A, [RH, Score=217, Expect=3e-74]; ENSG00000181218, HIST3H2A, histone cluster 3 H2A, [RH, Score=217, Expect=3e-74]} {Mouse: ENSMUSG00000063689, Hist2h2ab, histone cluster 2, H2ab, [RH, Score=222, Expect=3e-76]; ENSMUSG00000068855, Hist2h2ac, histone cluster 2, H2ac, [RH, Score=221, Expect=9e-76]; ENSMUSG00000063954, Hist2h2aa2, histone cluster 2, H2aa2, [RH, Score=220, Expect=1e-75]; ENSMUSG00000064220, Hist2h2aa1, histone cluster 2, H2aa1, [RH, Score=220, Expect=1e-75]; ENSMUSG00000094248, Hist1h2ao, histone cluster 1, H2ao, [RH, Score=219, Expect=7e-75]; ENSMUSG00000069270, Hist1h2ac, histone cluster 1, H2ac, [RH, Score=219, Expect=7e-75]; ENSMUSG00000061615, Hist1h2ab, histone cluster 1, H2ab, [RH, Score=219, Expect=7e-75]; ENSMUSG00000071516, Hist1h2ai, histone cluster 1, H2ai, [RH, Score=219, Expect=7e-75]; ENSMUSG00000069301, Hist1h2ag, histone cluster 1, H2ag, [RH, Score=219, Expect=7e-75]; ENSMUSG00000069272, Hist1h2ae, histone cluster 1, H2ae, [RH, Score=219, Expect=7e-75]; ENSMUSG00000069309, Hist1h2an, histone cluster 1, H2an, [RH, Score=219, Expect=7e-75]; ENSMUSG00000071478, Hist1h2ad, histone cluster 1, H2ad, [RH, Score=219, Expect=7e-75]; ENSMUSG00000094777, Hist1h2ap, histone cluster 1, H2ap, [RH, Score=219, Expect=7e-75]; ENSMUSG00000069302, Hist1h2ah, histone cluster 1, H2ah, [RH, Score=218, Expect=7e-75]; ENSMUSG00000060032, H2afj, H2A histone family, member J, [RH, Score=218, Expect=7e-75]; ENSMUSG00000061991, Hist1h2af, histone cluster 1, H2af, [RH, Score=218, Expect=1e-74]; ENSMUSG00000063021, Hist1h2ak, histone cluster 1, H2ak, [RH, Score=218, Expect=2e-74]; ENSMUSG00000078851, Hist3h2a, histone cluster 3, H2a, [RH, Score=217, Expect=2e-74]; ENSMUSG00000049932, H2afx, H2A histone family, member X, [RH, Score=217, Expect=5e-74]} {Dmel: FBgn0051618, His2A:CG31618, [RH, Score=203, Expect=4e-69]} {Celegans: WBGene00001921, his-47, Histone H2A, [RH, Score=197, Expect=1e-66]} {Smed: dd_Smed_v6_7383_0_1, dd_Smed_v6_7383_0_1, [RH, Score=220, Expect=1e-75]} {RNA1509_17255, RNA1509_34575, RNA1509_50942} {RNA1310_34748.1, RNA1509_17255, RNA1509_34575, RNA1509_50942} {RNA1509_17255, RNA1509_34575, RNA1509_50942, RNA815_17361.1}

Mlig455_070849 {REF} {Length: 538} {Pfam: C-terminus of histone H2A [PF16211.7, score=68.2]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=55.7]; Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=24.1]} {Human: ENSG00000184260, HIST2H2AC, histone cluster 2 H2A family member c, [RH, Score=221, Expect=1e-75]; ENSG00000184270, HIST2H2AB, histone cluster 2 H2A family member b, [RH, Score=220, Expect=2e-75]; ENSG00000275221, HIST1H2AK, histone cluster 1 H2A family member k, [RH, Score=220, Expect=3e-75]; ENSG00000274997, HIST1H2AH, histone cluster 1 H2A family member h, [RH, Score=220, Expect=2e-75]; ENSG00000196787, HIST1H2AG, histone cluster 1 H2A family member g, [RH, Score=220, Expect=3e-75]; ENSG00000203812, HIST2H2AA3, histone cluster 2 H2A family member a3, [RH, Score=220, Expect=2e-75]; ENSG00000276368, HIST1H2AJ, histone cluster 1 H2A family member j, [RH, Score=220, Expect=2e-75]; ENSG00000272196, HIST2H2AA4, histone cluster 2 H2A family member a4, [RH, Score=220, Expect=2e-75]; ENSG00000278677, HIST1H2AM, histone cluster 1 H2A family member m, [RH, Score=220, Expect=3e-75]; ENSG00000276903, HIST1H2AL, histone cluster 1 H2A family member l, [RH, Score=220, Expect=3e-75]; ENSG00000196747, HIST1H2AI, histone cluster 1 H2A family member i, [RH, Score=220, Expect=3e-75]; ENSG00000164508, HIST1H2AA, histone cluster 1 H2A family member a, [RH, Score=220, Expect=3e-75]; ENSG00000282988, AL031777.3, novel protein, [RH, Score=219, Expect=2e-74]; ENSG00000246705, H2AFJ, H2A histone family member J, [RH, Score=219, Expect=6e-75]; ENSG00000277075, HIST1H2AE, histone cluster 1 H2A family member e, [RH, Score=219, Expect=1e-74]; ENSG00000278463, HIST1H2AB, histone cluster 1 H2A family member b, [RH, Score=219, Expect=1e-74]; ENSG00000196866, HIST1H2AD, histone cluster 1 H2A family member d, [RH, Score=219, Expect=6e-75]; ENSG00000188486, H2AFX, H2A histone family member X, [RH, Score=218, Expect=2e-74]; ENSG00000180573, HIST1H2AC, histone cluster 1 H2A family member c, [RH, Score=218, Expect=1e-74]; ENSG00000284841, HIST3H2A, histone cluster 3 H2A, [RH, Score=217, Expect=3e-74]; ENSG00000181218, HIST3H2A, histone cluster 3 H2A, [RH, Score=217, Expect=3e-74]} {Mouse: ENSMUSG00000063689, Hist2h2ab, histone cluster 2, H2ab, [RH, Score=222, Expect=3e-76]; ENSMUSG00000068855, Hist2h2ac, histone cluster 2, H2ac, [RH, Score=221, Expect=9e-76]; ENSMUSG00000063954, Hist2h2aa2, histone cluster 2, H2aa2, [RH, Score=220, Expect=1e-75]; ENSMUSG00000064220, Hist2h2aa1, histone cluster 2, H2aa1, [RH, Score=220, Expect=1e-75]; ENSMUSG00000094248, Hist1h2ao, histone cluster 1, H2ao, [RH, Score=219, Expect=7e-75]; ENSMUSG00000069270, Hist1h2ac, histone cluster 1, H2ac, [RH, Score=219, Expect=7e-75]; ENSMUSG00000061615, Hist1h2ab, histone cluster 1, H2ab, [RH, Score=219, Expect=7e-75]; ENSMUSG00000071516, Hist1h2ai, histone cluster 1, H2ai, [RH, Score=219, Expect=7e-75]; ENSMUSG00000069301, Hist1h2ag, histone cluster 1, H2ag, [RH, Score=219, Expect=7e-75]; ENSMUSG00000069272, Hist1h2ae, histone cluster 1, H2ae, [RH, Score=219, Expect=7e-75]; ENSMUSG00000069309, Hist1h2an, histone cluster 1, H2an, [RH, Score=219, Expect=7e-75]; ENSMUSG00000071478, Hist1h2ad, histone cluster 1, H2ad, [RH, Score=219, Expect=7e-75]; ENSMUSG00000094777, Hist1h2ap, histone cluster 1, H2ap, [RH, Score=219, Expect=7e-75]; ENSMUSG00000069302, Hist1h2ah, histone cluster 1, H2ah, [RH, Score=218, Expect=7e-75]; ENSMUSG00000060032, H2afj, H2A histone family, member J, [RH, Score=218, Expect=7e-75]; ENSMUSG00000061991, Hist1h2af, histone cluster 1, H2af, [RH, Score=218, Expect=1e-74]; ENSMUSG00000063021, Hist1h2ak, histone cluster 1, H2ak, [RH, Score=218, Expect=2e-74]; ENSMUSG00000078851, Hist3h2a, histone cluster 3, H2a, [RH, Score=217, Expect=2e-74]; ENSMUSG00000049932, H2afx, H2A histone family, member X, [RH, Score=217, Expect=5e-74]} {Dmel: FBgn0051618, His2A:CG31618, [RH, Score=203, Expect=4e-69]} {Celegans: WBGene00001921, his-47, Histone H2A, [RH, Score=197, Expect=1e-66]} {Smed: dd_Smed_v6_7383_0_1, dd_Smed_v6_7383_0_1, [RH, Score=220, Expect=1e-75]} {RNA1509_17255} {RNA1310_67497} {RNA815_17361.1}
25. MligTC455_31542 925 19.27 Mlig455_018794, Mlig455_018965

Neo: Int S/G2/M

Age: -

 0.96 - - 0.960 - - -

Mlig455_018794 {REF} {Length: 3915} {TRANSSPLICED} {RNA1509_25121} {RNA1310_23509} {RNA815_25301}

Mlig455_018965 {REF} {Length: 4074} {TRANSSPLICED} {RNA1509_25121} {RNA1310_30818, RNA1509_25121} {RNA1509_25121, RNA815_25301}
26. MligTC455_24767 259 5.39 Mlig455_055467

Neo: -

Age: -

 CDO1 0.959 - - - - - 0.959 Mlig455_055467 {REF} {Length: 2636} {Pfam: Cysteine dioxygenase type I [PF05995.14, score=224.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=175.4]; Protein kinase domain [PF00069.27, score=72.0]} {Human: ENSG00000129596, CDO1, cysteine dioxygenase type 1, [RH, Score=234, Expect=5e-76]} {Mouse: ENSMUSG00000033022, Cdo1, cysteine dioxygenase 1, cytosolic, [RH, Score=231, Expect=9e-75]} {Dmel: FBgn0034364, CG5493, [RH, Score=207, Expect=6e-65]} {Celegans: WBGene00018986, cdo-1, Cysteine dioxygenase 1, [RH, Score=208, Expect=5e-66]} {Smed: dd_Smed_v6_11561_0_1, dd_Smed_v6_11561_0_1, [Score=173, Expect=8e-49]} {RNA1509_3112} {RNA1310_25521} {RNA815_10217}
27. MligTC455_25954 1082 22.55 Mlig455_013581, Mlig455_013633, Mlig455_061452

Neo: Int S/G2/M

Age: -

 0.959 - - - - - 0.959

Mlig455_013581 {REF} {Length: 3748} {TRANSSPLICED} {Pfam: PTB domain (IRS-1 type) [PF02174.19, score=22.7]} {RNA1509_27081} {RNA1310_19348.1} {RNA815_9481}

Mlig455_013633 {REF} {Length: 3545} {TRANSSPLICED} {Pfam: PTB domain (IRS-1 type) [PF02174.19, score=22.7]} {RNA1509_41932} {RNA1310_19348.1, RNA1509_41932} {RNA1509_41932, RNA815_9481}

Mlig455_061452 {REF} {Length: 3602} {TRANSSPLICED} {Pfam: PTB domain (IRS-1 type) [PF02174.19, score=22.7]} {RNA1509_27081} {RNA1310_19348.1} {RNA815_9481}
28. MligTC455_27741 387 8.07 Mlig455_020707, Mlig455_020775

Neo: Irradiation

Age: Down-Up-Down

 GEN1 0.959 - - - - - 0.959

Mlig455_020707 {REF} {Length: 3335} {TRANSSPLICED} {Pfam: XPG I-region [PF00867.20, score=76.2]; XPG N-terminal domain [PF00752.19, score=58.9]; Cornifin (SPRR) family [PF02389.17, score=26.4]} {Human: ENSG00000178295, GEN1, GEN1, Holliday junction 5' flap endonuclease, [RH, Score=214, Expect=1e-58]} {Mouse: ENSMUSG00000051235, Gen1, GEN1, Holliday junction 5' flap endonuclease, [RH, Score=214, Expect=2e-58]} {Dmel: FBgn0263831, Gen, XPG-like endonuclease, [RH, Score=177, Expect=9e-47]} {Celegans: WBGene00000794, crn-1, Flap endonuclease 1, [Score=95.9, Expect=6e-21]} {Smed: dd_Smed_v6_8206_0_1, dd_Smed_v6_8206_0_1, [Score=104, Expect=5e-24]} {RNA1509_33403} {RNA1310_7248.1, RNA1509_33403} {RNA1509_33403, RNA815_24301}

Mlig455_020775 {REF} {Length: 3049} {TRANSSPLICED} {Pfam: XPG I-region [PF00867.20, score=76.2]; XPG N-terminal domain [PF00752.19, score=58.2]; Cornifin (SPRR) family [PF02389.17, score=26.4]} {Human: ENSG00000178295, GEN1, GEN1, Holliday junction 5' flap endonuclease, [RH, Score=214, Expect=2e-58]} {Mouse: ENSMUSG00000051235, Gen1, GEN1, Holliday junction 5' flap endonuclease, [RH, Score=213, Expect=3e-58]} {Dmel: FBgn0263831, Gen, XPG-like endonuclease, [RH, Score=176, Expect=2e-46]} {Celegans: WBGene00000794, crn-1, Flap endonuclease 1, [Score=95.1, Expect=9e-21]} {Smed: dd_Smed_v6_8206_0_1, dd_Smed_v6_8206_0_1, [Score=103, Expect=7e-24]} {RNA1509_33403} {RNA1310_7248.1} {RNA815_24301}
29. MligTC455_30285 500 10.41 Mlig455_007567, Mlig455_038583

Neo: -

Age: -

 ADAM17 0.959 - - 0.959 - - -

Mlig455_007567 {REF} {Length: 5809} {Pfam: Metallo-peptidase family M12 [PF13688.8, score=88.0]; Metallo-peptidase family M12B Reprolysin-like [PF13574.8, score=73.0]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=35.7]; Membrane-proximal domain, switch, for ADAM17 [PF16698.7, score=32.1]; Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=30.0]; Reprolysin family propeptide [PF01562.21, score=23.5]} {Human: ENSG00000151694, ADAM17, ADAM metallopeptidase domain 17, [RH, Score=340, Expect=2e-104]} {Mouse: ENSMUSG00000052593, Adam17, a disintegrin and metallopeptidase domain 17, [RH, Score=339, Expect=2e-104]} {Dmel: FBgn0039734, Tace, [RH, Score=294, Expect=2e-88]} {Celegans: WBGene00000075, adm-4, ADAM (Disintegrin plus metalloprotease) family, [RH, Score=203, Expect=9e-56]} {Smed: dd_Smed_v6_2341_0_3, dd_Smed_v6_2341_0_3, [Score=125, Expect=2e-29]} {RNA1509_15132, RNA1509_56518, RNA1509_56873} {RNA1310_5685, RNA1509_56518, RNA1509_56873} {RNA1509_56518, RNA1509_56873, RNA815_5678}

Mlig455_038583 {REF} {Length: 508} {Pfam: Cysteine rich repeat [PF02363.21, score=22.1]} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=45.8, Expect=3e-06]} {RNA1509_49394} {RNA1310_1068.1} {RNA815_17696}
30. MligTC455_48029 995 20.73 Mlig455_031836

Neo: -

Age: Down-Down-Up

Region-enriched R5: 2.093/0.00069

Regeneration-upregulated BL: 2.388

Regeneration-enriched BL: 2.388

 SPSB4 0.959 - - - - - 0.959 Mlig455_031836 {REF} {Length: 1363} {TRANSSPLICED} {Pfam: SPRY domain [PF00622.30, score=65.7]; SOCS box [PF07525.18, score=33.4]} {Human: ENSG00000175093, SPSB4, splA/ryanodine receptor domain and SOCS box containing 4, [Score=316, Expect=3e-107]; ENSG00000171621, SPSB1, splA/ryanodine receptor domain and SOCS box containing 1, [Score=315, Expect=5e-107]} {Mouse: ENSMUSG00000039911, Spsb1, splA/ryanodine receptor domain and SOCS box containing 1, [Score=316, Expect=2e-107]; ENSMUSG00000046997, Spsb4, splA/ryanodine receptor domain and SOCS box containing 4, [Score=311, Expect=1e-105]} {Dmel: FBgn0026238, gus, gustavus, [Score=306, Expect=1e-103]} {Celegans: WBGene00021597, spsb-1, SPSB (SPry and Socs Box) family, [RH, Score=262, Expect=1e-84]} {Smed: dd_Smed_v6_9905_0_1, dd_Smed_v6_9905_0_1, [Score=213, Expect=1e-66]} {RNA1509_16638} {RNA1310_11847} {RNA815_5105}
31. MligTC455_49541 255 5.31 Mlig455_052626

Neo: -

Age: Down-Down-Up

 KLHL12 0.957 - - - - - 0.957 Mlig455_052626 {REF} {Length: 3902} {TRANSSPLICED} {Pfam: Kelch motif [PF01344.27, score=209.7]; Kelch motif [PF13964.8, score=137.5]; BTB/POZ domain [PF00651.33, score=108.3]; BTB And C-terminal Kelch [PF07707.17, score=101.5]; Galactose oxidase, central domain [PF13418.8, score=74.8]; Kelch motif [PF07646.17, score=69.4]; Galactose oxidase, central domain [PF13415.8, score=67.1]; Kelch motif [PF13854.8, score=36.4]} {Human: ENSG00000117153, KLHL12, kelch like family member 12, [RH, Score=607, Expect=0.0]} {Mouse: ENSMUSG00000026455, Klhl12, kelch-like 12, [RH, Score=607, Expect=0.0]} {Dmel: FBgn0040230, dbo, diablo, [Score=373, Expect=2e-121]} {Celegans: WBGene00020030, R12E2.1, [Score=352, Expect=1e-113]} {Smed: dd_Smed_v6_7304_0_1, dd_Smed_v6_7304_0_1, [RH, Score=613, Expect=0.0]} {RNA1509_17800} {RNA1310_5820, RNA1509_17800} {RNA1509_17800, RNA815_4439}
32. MligTC455_24769 227 4.72 Mlig455_027516

Neo: -

Age: -

Regeneration-upregulated BL: 4.185

Regeneration-enriched BL: 4.185

 AMBRA1 0.955 - - - - - 0.955 Mlig455_027516 {REF} {Length: 4785} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=29.9]} {Human: ENSG00000110497, AMBRA1, autophagy and beclin 1 regulator 1, [RH, Score=79.7, Expect=1e-14]} {Mouse: ENSMUSG00000040506, Ambra1, autophagy/beclin 1 regulator 1, [RH, Score=79.7, Expect=9e-15]} {RNA1509_17935} {RNA1310_8113.1, RNA1509_17935} {RNA1509_17935, RNA815_408.1}
33. MligTC455_48025 549 11.44 Mlig455_066964

Neo: -

Age: -

 0.955 - - - 0.955 - - Mlig455_066964 {REF} {Length: 1735} {TRANSSPLICED} {Pfam: C-terminal duplication domain of Friend of PRMT1 [PF13865.8, score=28.0]} {RNA1509_8514} {RNA1310_4141.1, RNA1509_8514} {RNA1509_8514, RNA815_7360}
34. MligTC455_18472 662 13.79 Mlig455_065928

Neo: -

Age: -

 0.953 - - - - - 0.953 Mlig455_065928 {REF} {Length: 2444} {RNA1509_24487} {RNA1310_16089.1} {RNA815_13960}
35. MligTC455_21528 367 7.64 Mlig455_015393, Mlig455_015396

Neo: Int S/G2/M

Age: -

 ASCC3 0.953 - - - - - 0.953

Mlig455_015393 {REF} {Length: 8035} {Pfam: Sec63 Brl domain [PF02889.18, score=439.6]; DEAD/DEAH box helicase [PF00270.31, score=178.1]; Type III restriction enzyme, res subunit [PF04851.17, score=81.0]; Helicase conserved C-terminal domain [PF00271.33, score=48.8]; AAA domain [PF13401.8, score=30.9]; AAA domain [PF13604.8, score=30.2]; AAA domain [PF13245.8, score=22.7]} {Human: ENSG00000112249, ASCC3, activating signal cointegrator 1 complex subunit 3, [RH, Score=2188, Expect=0.0]} {Mouse: ENSMUSG00000038774, Ascc3, activating signal cointegrator 1 complex subunit 3, [RH, Score=2186, Expect=0.0]} {Dmel: FBgn0038344, obe, obelus, [RH, Score=1927, Expect=0.0]} {Celegans: WBGene00013189, Y54E2A.4, [RH, Score=1679, Expect=0.0]} {Smed: dd_Smed_v6_11140_0_1, dd_Smed_v6_11140_0_1, [RH, Score=1927, Expect=0.0]} {RNA1509_2241, RNA1509_55312} {RNA1310_438, RNA1509_2241, RNA1509_55312} {RNA1509_2241, RNA1509_55312, RNA815_146.1}

Mlig455_015396 {REF} {Length: 7701} {Pfam: Sec63 Brl domain [PF02889.18, score=440.8]; DEAD/DEAH box helicase [PF00270.31, score=177.4]; Type III restriction enzyme, res subunit [PF04851.17, score=80.9]; Helicase conserved C-terminal domain [PF00271.33, score=48.4]; AAA domain [PF13401.8, score=30.9]; AAA domain [PF13604.8, score=30.1]; AAA domain [PF13245.8, score=22.2]} {Human: ENSG00000112249, ASCC3, activating signal cointegrator 1 complex subunit 3, [RH, Score=2188, Expect=0.0]} {Mouse: ENSMUSG00000038774, Ascc3, activating signal cointegrator 1 complex subunit 3, [RH, Score=2187, Expect=0.0]} {Dmel: FBgn0038344, obe, obelus, [RH, Score=1927, Expect=0.0]} {Celegans: WBGene00013189, Y54E2A.4, [RH, Score=1677, Expect=0.0]} {Smed: dd_Smed_v6_11140_0_1, dd_Smed_v6_11140_0_1, [RH, Score=1929, Expect=0.0]} {RNA1509_2241} {RNA1310_438} {RNA815_146.1}
36. MligTC455_17143 949 19.78 Mlig455_015840, Mlig455_016056

Neo: -

Age: -

Region-enriched R4: 1.171/0.02022

 PAN3 0.952 - - 0.952 - - -

Mlig455_015840 {REF} {Length: 3953} {TRANSSPLICED} {Pfam: Pan3 Pseudokinase domain [PF18101.3, score=159.3]} {Human: ENSG00000152520, PAN3, poly(A) specific ribonuclease subunit PAN3, [RH, Score=292, Expect=6e-89]} {Mouse: ENSMUSG00000029647, Pan3, PAN3 poly(A) specific ribonuclease subunit, [RH, Score=290, Expect=8e-87]} {Dmel: FBgn0035397, CG11486, [RH, Score=287, Expect=2e-86]} {Celegans: WBGene00014015, panl-3, PAB-dependent poly(A)-specific ribonuclease subunit PAN3, [RH, Score=239, Expect=3e-70]} {Smed: dd_Smed_v6_4588_0_4, dd_Smed_v6_4588_0_4, [RH, Score=353, Expect=1e-112]} {RNA1509_13063} {RNA1310_6283} {RNA815_4137.1}

Mlig455_016056 {REF} {Length: 6356} {TRANSSPLICED} {Pfam: Pan3 Pseudokinase domain [PF18101.3, score=159.2]} {Human: ENSG00000152520, PAN3, poly(A) specific ribonuclease subunit PAN3, [RH, Score=291, Expect=9e-89]} {Mouse: ENSMUSG00000029647, Pan3, PAN3 poly(A) specific ribonuclease subunit, [RH, Score=291, Expect=1e-88]} {Dmel: FBgn0035397, CG11486, [RH, Score=286, Expect=5e-86]} {Celegans: WBGene00014015, panl-3, PAB-dependent poly(A)-specific ribonuclease subunit PAN3, [RH, Score=240, Expect=2e-70]} {Smed: dd_Smed_v6_4588_0_4, dd_Smed_v6_4588_0_4, [RH, Score=354, Expect=6e-113]} {RNA1509_13063} {RNA1310_6283, RNA1509_13063} {RNA1509_13063, RNA815_4137.1}
37. MligTC455_18473 658 13.71 Mlig455_065950

Neo: -

Age: -

 0.952 - - - - - 0.952 Mlig455_065950 {REF} {Length: 1966} {TRANSSPLICED} {RNA1509_24487, RNA1509_46170} {RNA1310_16089.1, RNA1509_24487, RNA1509_46170} {RNA1509_24487, RNA1509_46170, RNA815_13960}
38. MligTC455_32500 699 14.56 Mlig455_049574

Neo: Neoblast

Age: -

Regeneration-upregulated R6: 1.404

Regeneration-enriched R6: 1.404

 SRCAP 0.952 - - 0.952 - - - Mlig455_049574 {REF} {Length: 6427} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=243.0]; Helicase conserved C-terminal domain [PF00271.33, score=66.0]; HSA [PF07529.15, score=46.8]; Type III restriction enzyme, res subunit [PF04851.17, score=26.2]; DEAD/DEAH box helicase [PF00270.31, score=18.8]} {Human: ENSG00000080603, SRCAP, Snf2 related CREBBP activator protein, [RH, Score=608, Expect=0.0]; ENSG00000282034, AC106886.5, novel transcript, [RH, Score=603, Expect=4e-178]} {Mouse: ENSMUSG00000107023, Gm42715, predicted gene 42715, [RH, Score=600, Expect=3e-177]; ENSMUSG00000053877, Srcap, Snf2-related CREBBP activator protein, [RH, Score=600, Expect=3e-177]} {Dmel: FBgn0020306, dom, domino, [RH, Score=814, Expect=0.0]} {Celegans: WBGene00007027, ssl-1, Helicase ssl-1, [RH, Score=691, Expect=0.0]} {Smed: dd_Smed_v6_8618_0_1, dd_Smed_v6_8618_0_1, [RH, Score=1136, Expect=0.0]} {RNA1509_18819, RNA1509_4627} {RNA1310_484.1, RNA1509_18819, RNA1509_4627} {RNA1509_18819, RNA1509_4627, RNA815_174.1}
39. MligTC455_33868 554 11.55 Mlig455_005238

Neo: -

Age: -

 MED13 0.952 - - - - - 0.952 Mlig455_005238 {REF} {Length: 7105} {Pfam: Mediator complex subunit 13 C-terminal domain [PF06333.14, score=204.1]; Mediator complex subunit 13 N-terminal [PF11597.10, score=49.4]} {Human: ENSG00000108510, MED13, mediator complex subunit 13, [RH, Score=213, Expect=1e-54]; ENSG00000123066, MED13L, mediator complex subunit 13 like, [RH, Score=203, Expect=9e-52]} {Mouse: ENSMUSG00000034297, Med13, mediator complex subunit 13, [RH, Score=213, Expect=6e-55]} {Dmel: FBgn0003415, skd, skuld, [RH, Score=199, Expect=1e-50]} {Celegans: WBGene00002295, let-19, Mediator of RNA polymerase II transcription subunit 13, [RH, Score=145, Expect=2e-34]} {Smed: dd_Smed_v6_5628_0_1, dd_Smed_v6_5628_0_1, [RH, Score=176, Expect=4e-44]} {RNA1509_5621} {RNA1310_887, RNA1509_5621} {RNA1509_5621, RNA815_2444}
40. MligTC455_40431 1617 33.69 Mlig455_001071, Mlig455_005584

Neo: Irradiation

Age: logFC(26M/2M)=0.290

Region-enriched R5: 1.292/0.00002

 HDDC3 0.952 - - 0.952 - - -

Mlig455_001071 {REF} {Length: 1801} {TRANSSPLICED} {Pfam: HD domain [PF13328.8, score=65.4]; HD domain [PF01966.24, score=21.8]} {Human: ENSG00000184508, HDDC3, HD domain containing 3, [RH, Score=220, Expect=4e-73]} {Mouse: ENSMUSG00000030532, Hddc3, HD domain containing 3, [RH, Score=221, Expect=9e-74]} {Dmel: FBgn0039650, Mesh1, Metazoan SpoT homolog-1, [RH, Score=187, Expect=2e-60]} {Celegans: WBGene00014148, ZK909.3, [RH, Score=182, Expect=8e-58]} {Smed: dd_Smed_v6_15359_0_1, dd_Smed_v6_15359_0_1, [RH, Score=202, Expect=1e-66]} {RNA1509_18891, RNA1509_19707, RNA1509_21578, RNA1509_44471} {RNA1310_24812, RNA1509_18891, RNA1509_19707, RNA1509_21578, RNA1509_44471} {RNA1509_18891, RNA1509_19707, RNA1509_21578, RNA1509_44471, RNA815_10702.1}

Mlig455_005584 {REF} {Length: 1905} {TRANSSPLICED} {Pfam: HD domain [PF13328.8, score=64.9]; HD domain [PF01966.24, score=21.6]} {Human: ENSG00000184508, HDDC3, HD domain containing 3, [RH, Score=222, Expect=5e-74]} {Mouse: ENSMUSG00000030532, Hddc3, HD domain containing 3, [RH, Score=223, Expect=2e-74]} {Dmel: FBgn0039650, Mesh1, Metazoan SpoT homolog-1, [RH, Score=188, Expect=6e-61]} {Celegans: WBGene00014148, ZK909.3, [RH, Score=183, Expect=2e-58]} {Smed: dd_Smed_v6_15359_0_1, dd_Smed_v6_15359_0_1, [RH, Score=202, Expect=8e-67]} {RNA1509_19707} {RNA1310_45800} {RNA815_14376}
41. MligTC455_21255 200 4.16 Mlig455_009051

Neo: -

Age: -

 CLCN7 0.951 - - - - - 0.951 Mlig455_009051 {REF} {Length: 4073} {TRANSSPLICED} {Pfam: Voltage gated chloride channel [PF00654.22, score=285.8]; CBS domain [PF00571.30, score=51.7]} {Human: ENSG00000103249, CLCN7, chloride voltage-gated channel 7, [RH, Score=756, Expect=0.0]} {Mouse: ENSMUSG00000036636, Clcn7, chloride channel, voltage-sensitive 7, [RH, Score=775, Expect=0.0]} {Dmel: FBgn0033755, ClC-b, Chloride channel-b, [RH, Score=593, Expect=0.0]} {Celegans: WBGene00000533, clh-6, Chloride channel protein, [RH, Score=634, Expect=0.0]} {Smed: dd_Smed_v6_3071_0_1, dd_Smed_v6_3071_0_1, [RH, Score=612, Expect=0.0]} {RNA1509_10313} {RNA1310_3338, RNA1509_10313} {RNA1509_10313, RNA815_1278}
42. MligTC455_27989 137 2.85 Mlig455_015923

Neo: -

Age: Down-Up-Down

 SVOP 0.951 - - - - - 0.951 Mlig455_015923 {REF} {Length: 2666} {Pfam: Major Facilitator Superfamily [PF07690.18, score=112.7]; Sugar (and other) transporter [PF00083.26, score=104.9]} {Human: ENSG00000166111, SVOP, SV2 related protein, [Score=229, Expect=7e-68]} {Mouse: ENSMUSG00000042078, Svop, SV2 related protein, [Score=221, Expect=3e-65]} {Dmel: FBgn0051272, CG31272, [Score=71.2, Expect=9e-13]} {Celegans: WBGene00014021, svop-1, Putative transporter svop-1, [Score=198, Expect=5e-57]} {Smed: dd_Smed_v6_3645_0_1, dd_Smed_v6_3645_0_1, [Score=251, Expect=2e-77]} {RNA1310_58770} {RNA815_42378}
43. MligTC455_51708 688 14.33 Mlig455_038449

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.006/0.01700

 POLR3K 0.951 - - 0.951 - - - Mlig455_038449 {REF} {Length: 438} {TRANSSPLICED} {Pfam: Transcription factor S-II (TFIIS) [PF01096.20, score=62.0]; RNA polymerases M/15 Kd subunit [PF02150.18, score=27.0]; Nudix N-terminal [PF14803.8, score=18.9]; Transposase zinc-ribbon domain [PF12760.9, score=18.5]} {Human: ENSG00000161980, POLR3K, RNA polymerase III subunit K, [RH, Score=133, Expect=2e-41]} {Mouse: ENSMUSG00000038628, Polr3k, polymerase (RNA) III (DNA directed) polypeptide K, [RH, Score=132, Expect=2e-41]} {Dmel: FBgn0061362, CG33785, [RH, Score=117, Expect=1e-35]} {Celegans: WBGene00022309, rpc-11, DNA-directed RNA polymerase subunit, [RH, Score=122, Expect=9e-38]} {Smed: dd_Smed_v6_5337_0_1, dd_Smed_v6_5337_0_1, [RH, Score=71.6, Expect=1e-17]} {RNA1509_20847, RNA1509_35360} {RNA1310_49768.2, RNA1509_20847, RNA1509_35360} {RNA1509_20847, RNA1509_35360, RNA815_35455.1}
44. MligTC455_19446 334 6.96 Mlig455_058253

Neo: -

Age: -

Region-enriched R5: 1.502/0.00083

 0.95 - - 0.950 - - - Mlig455_058253 {REF} {Length: 1699} {TRANSSPLICED} {tRNA: Gln(TTG), score=76.3} {Pfam: Uncharacterised protein family UPF0542 [PF15086.8, score=82.7]} {Smed: dd_Smed_v6_2870_0_1, dd_Smed_v6_2870_0_1, [RH, Score=57.0, Expect=6e-12]} {RNA1509_15931, RNA1509_41745} {RNA1310_23211.1, RNA1509_15931, RNA1509_41745} {RNA1509_15931, RNA1509_41745, RNA815_18569.1}
45. MligTC455_20821 827 17.23 Mlig455_013711

Neo: -

Age: Up-Down-Down

 ROBO1 0.95 - - - - - 0.950 Mlig455_013711 {REF} {Length: 7077} {TRANSSPLICED} {Pfam: Immunoglobulin domain [PF13927.8, score=236.0]; Immunoglobulin I-set domain [PF07679.18, score=235.8]; Immunoglobulin domain [PF13895.8, score=163.0]; Immunoglobulin domain [PF00047.27, score=126.6]; Immunoglobulin V-set domain [PF07686.19, score=92.4]; Fibronectin type III domain [PF00041.23, score=79.4]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=44.6]; Immunoglobulin domain [PF18452.3, score=26.5]} {Human: ENSG00000169855, ROBO1, roundabout guidance receptor 1, [RH, Score=306, Expect=7e-84]; ENSG00000185008, ROBO2, roundabout guidance receptor 2, [RH, Score=295, Expect=9e-81]; ENSG00000154134, ROBO3, roundabout guidance receptor 3, [RH, Score=294, Expect=2e-80]} {Mouse: ENSMUSG00000022883, Robo1, roundabout guidance receptor 1, [RH, Score=308, Expect=1e-84]; ENSMUSG00000052516, Robo2, roundabout guidance receptor 2, [RH, Score=295, Expect=1e-80]} {Dmel: FBgn0002543, robo2, roundabout 2, [RH, Score=288, Expect=1e-78]} {Celegans: WBGene00004729, sax-3, [RH, Score=289, Expect=2e-79]} {Smed: dd_Smed_v6_8494_0_1, dd_Smed_v6_8494_0_1, [RH, Score=501, Expect=3e-151]} {RNA1509_38759, RNA1509_40736, RNA1509_4232, RNA1509_44721, RNA1509_44763} {RNA1310_924.1, RNA1509_38759, RNA1509_40736, RNA1509_44721, RNA1509_44763} {RNA1509_38759, RNA1509_40736, RNA1509_44721, RNA1509_44763, RNA815_734.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA