Data search


search
Exact
Search

Results for MligTC455_51297

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_51297 109 2.28 Mlig455_004012

Neo: -

Age: -

Mlig455_004012 {REF} {Length: 1080} {NoTransDecoderORF} {RNA1509_38820} {RNA1310_33177} {RNA815_16277}

Cumulative graph for MligTC455_51297

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.489 1.809 0.41565 1.00000
RegionR2 0.62 1.809 0.50357 0.88280
RegionR3 -0.926 1.809 0.31740 0.85584
RegionR4 -0.57 1.809 0.51316 0.83908
RegionR5 0.877 1.809 0.17279 0.44381
RegionR6 -1.295 1.809 0.20516 0.77967
RegionR7 -0.568 1.809 0.68369 1.00000
RegionR8 0.373 1.809 0.80387 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.058 1.809 0.66349 1.00000
RegenerationR2 0.071 1.809 0.92344 1.00000
RegenerationR3 1.576 1.809 0.08631 0.47757
RegenerationR4 0.788 1.809 0.32595 0.76250
RegenerationR5 0.107 1.809 0.87396 1.00000
RegenerationR6 1.394 1.809 0.19072 0.52880
RegenerationBL 0.791 1.809 0.49783 0.86279
RegenerationTP -0.594 1.809 0.70210 1.00000


Genes with expression patterns similar to MligTC455_51297

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_51297 109 2.28 Mlig455_004012

Neo: -

Age: -

5 1.000 - 1.000 1.000 1.000 1.000 Mlig455_004012 {REF} {Length: 1080} {NoTransDecoderORF} {RNA1509_38820} {RNA1310_33177} {RNA815_16277}
2. MligTC455_54343 138 2.87 Mlig455_045793

Neo: -

Age: Down-Up-Down

CCDC74B 0.979 - - 0.979 - - - Mlig455_045793 {REF} {Length: 1939} {TRANSSPLICED} {Pfam: Coiled-coil domain of unknown function [PF14916.8, score=48.3]; Coiled coil protein 74, C terminal [PF14917.8, score=28.5]} {Human: ENSG00000152076, CCDC74B, coiled-coil domain containing 74B, [Score=48.1, Expect=8e-06]; ENSG00000163040, CCDC74A, coiled-coil domain containing 74A, [Score=48.1, Expect=9e-06]} {Mouse: ENSMUSG00000041617, Ccdc74a, coiled-coil domain containing 74A, [RH, Score=48.5, Expect=3e-07]} {RNA1509_40595} {RNA1310_26197} {RNA815_7738.1}
3. MligTC455_51636 235 4.9 Mlig455_065291, Mlig455_065315

Neo: -

Age: -

DTWD1 0.971 - - - - - 0.971

Mlig455_065291 {REF} {Length: 1731} {TRANSSPLICED} {Pfam: DTW domain [PF03942.17, score=91.8]} {Human: ENSG00000104047, DTWD1, DTW domain containing 1, [RH, Score=155, Expect=1e-42]} {Mouse: ENSMUSG00000023330, Dtwd1, DTW domain containing 1, [RH, Score=169, Expect=3e-48]} {Dmel: FBgn0039664, CG2006, [RH, Score=125, Expect=5e-32]} {Celegans: WBGene00175030, Y53C12A.10, [RH, Score=100, Expect=7e-24]} {Smed: dd_Smed_v6_7274_0_1, dd_Smed_v6_7274_0_1, [RH, Score=159, Expect=3e-45]} {RNA1509_34738} {RNA1310_45995.1} {RNA815_42663}

Mlig455_065315 {REF} {Length: 1634} {TRANSSPLICED} {Pfam: DTW domain [PF03942.17, score=92.0]} {Human: ENSG00000104047, DTWD1, DTW domain containing 1, [RH, Score=155, Expect=5e-43]} {Mouse: ENSMUSG00000023330, Dtwd1, DTW domain containing 1, [RH, Score=170, Expect=9e-49]} {Dmel: FBgn0039664, CG2006, [RH, Score=126, Expect=2e-32]} {Celegans: WBGene00175030, Y53C12A.10, [RH, Score=100, Expect=4e-24]} {Smed: dd_Smed_v6_7274_0_1, dd_Smed_v6_7274_0_1, [RH, Score=159, Expect=8e-46]} {RNA1509_34738} {RNA1310_45995.1} {RNA815_42663}
4. MligTC455_23227 61 1.28 Mlig455_001505

Neo: -

Age: -

EPHA7 0.956 - - 0.956 - - - Mlig455_001505 {REF} {Length: 4755} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=295.0]; Protein kinase domain [PF00069.27, score=136.9]; Ephrin receptor ligand binding domain [PF01404.21, score=117.2]; Fibronectin type III domain [PF00041.23, score=79.8]; Ephrin type-A receptor 2 transmembrane domain [PF14575.8, score=70.8]; SAM domain (Sterile alpha motif) [PF07647.19, score=58.4]; SAM domain (Sterile alpha motif) [PF00536.32, score=57.4]; Tyrosine-protein kinase ephrin type A/B receptor-like [PF07699.15, score=26.4]; ABC1 atypical kinase-like domain [PF03109.18, score=22.2]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=19.5]} {Human: ENSG00000135333, EPHA7, EPH receptor A7, [RH, Score=716, Expect=0.0]; ENSG00000145242, EPHA5, EPH receptor A5, [RH, Score=696, Expect=0.0]; ENSG00000116106, EPHA4, EPH receptor A4, [RH, Score=694, Expect=0.0]} {Mouse: ENSMUSG00000028289, Epha7, Eph receptor A7, [RH, Score=716, Expect=0.0]; ENSMUSG00000026235, Epha4, Eph receptor A4, [RH, Score=697, Expect=0.0]; ENSMUSG00000029245, Epha5, Eph receptor A5, [RH, Score=692, Expect=0.0]} {Dmel: FBgn0025936, Eph, Eph receptor tyrosine kinase, [RH, Score=676, Expect=0.0]} {Celegans: WBGene00006868, vab-1, Ephrin receptor 1, [RH, Score=485, Expect=6e-153]} {Smed: dd_Smed_v6_16928_0_1, dd_Smed_v6_16928_0_1, [RH, Score=579, Expect=0.0]} {RNA1509_51951} {RNA1310_5149.1} {RNA815_23934}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA