Data search


search
Exact
Search

Results for MligTC455_51310

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_51310 855 17.80 Mlig455_016212, Mlig455_054271

Neo: Irradiation

Age: -

ANAPC2

Mlig455_016212 {REF} {Length: 2513} {TRANSSPLICED} {Pfam: Cullin family [PF00888.24, score=82.1]; Anaphase promoting complex (APC) subunit 2 [PF08672.13, score=67.6]} {Human: ENSG00000176248, ANAPC2, anaphase promoting complex subunit 2, [RH, Score=352, Expect=9e-109]} {Mouse: ENSMUSG00000026965, Anapc2, anaphase promoting complex subunit 2, [RH, Score=347, Expect=7e-107]} {Dmel: FBgn0002791, mr, morula, [RH, Score=351, Expect=5e-109]} {Celegans: WBGene00000143, apc-2, Anaphase-promoting complex subunit 2, [RH, Score=152, Expect=3e-38]} {Smed: dd_Smed_v6_7937_0_2, dd_Smed_v6_7937_0_2, [RH, Score=258, Expect=2e-75]} {RNA1509_7329} {RNA1310_8459} {RNA815_10464}

Mlig455_054271 {REF} {Length: 2526} {TRANSSPLICED} {Pfam: Cullin family [PF00888.24, score=83.5]; Anaphase promoting complex (APC) subunit 2 [PF08672.13, score=67.6]} {Human: ENSG00000176248, ANAPC2, anaphase promoting complex subunit 2, [RH, Score=355, Expect=6e-110]} {Mouse: ENSMUSG00000026965, Anapc2, anaphase promoting complex subunit 2, [RH, Score=347, Expect=7e-107]} {Dmel: FBgn0002791, mr, morula, [RH, Score=352, Expect=2e-109]} {Celegans: WBGene00000143, apc-2, Anaphase-promoting complex subunit 2, [RH, Score=150, Expect=1e-37]} {Smed: dd_Smed_v6_7937_0_2, dd_Smed_v6_7937_0_2, [RH, Score=258, Expect=2e-75]} {RNA1509_7329} {RNA1310_8459, RNA1509_7329} {RNA1509_7329, RNA815_10464}

Cumulative graph for MligTC455_51310

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.197 4.45 0.86965 1.00000
RegionR2 0.647 4.45 0.20119 0.56200
RegionR3 0.168 4.45 0.68418 1.00000
RegionR4 0.183 4.45 0.70023 0.98896
RegionR5 0.092 4.45 0.79925 1.00000
RegionR6 0.296 4.45 0.46773 1.00000
RegionR7 -0.954 4.45 0.13401 0.68858
RegionR8 -0.236 4.45 0.74501 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.901 4.45 0.62448 1.00000
RegenerationR2 0.267 4.45 0.50471 0.87317
RegenerationR3 0.546 4.45 0.23480 0.66902
RegenerationR4 0.134 4.45 0.78255 0.98180
RegenerationR5 0.744 4.45 0.07158 0.41998
RegenerationR6 1.049 4.45 0.01622 0.15747
RegenerationBL 1.5 4.45 0.00310 0.04797
RegenerationTP 0.726 4.45 0.25418 0.70190


Genes with expression patterns similar to MligTC455_51310

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_51310 855 17.8 Mlig455_016212, Mlig455_054271

Neo: Irradiation

Age: -

ANAPC2 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_016212 {REF} {Length: 2513} {TRANSSPLICED} {Pfam: Cullin family [PF00888.24, score=82.1]; Anaphase promoting complex (APC) subunit 2 [PF08672.13, score=67.6]} {Human: ENSG00000176248, ANAPC2, anaphase promoting complex subunit 2, [RH, Score=352, Expect=9e-109]} {Mouse: ENSMUSG00000026965, Anapc2, anaphase promoting complex subunit 2, [RH, Score=347, Expect=7e-107]} {Dmel: FBgn0002791, mr, morula, [RH, Score=351, Expect=5e-109]} {Celegans: WBGene00000143, apc-2, Anaphase-promoting complex subunit 2, [RH, Score=152, Expect=3e-38]} {Smed: dd_Smed_v6_7937_0_2, dd_Smed_v6_7937_0_2, [RH, Score=258, Expect=2e-75]} {RNA1509_7329} {RNA1310_8459} {RNA815_10464}

Mlig455_054271 {REF} {Length: 2526} {TRANSSPLICED} {Pfam: Cullin family [PF00888.24, score=83.5]; Anaphase promoting complex (APC) subunit 2 [PF08672.13, score=67.6]} {Human: ENSG00000176248, ANAPC2, anaphase promoting complex subunit 2, [RH, Score=355, Expect=6e-110]} {Mouse: ENSMUSG00000026965, Anapc2, anaphase promoting complex subunit 2, [RH, Score=347, Expect=7e-107]} {Dmel: FBgn0002791, mr, morula, [RH, Score=352, Expect=2e-109]} {Celegans: WBGene00000143, apc-2, Anaphase-promoting complex subunit 2, [RH, Score=150, Expect=1e-37]} {Smed: dd_Smed_v6_7937_0_2, dd_Smed_v6_7937_0_2, [RH, Score=258, Expect=2e-75]} {RNA1509_7329} {RNA1310_8459, RNA1509_7329} {RNA1509_7329, RNA815_10464}
2. MligTC455_47102 1274 26.54 Mlig455_038235, Mlig455_038308

Neo: -

Age: -

WBP11 1.695 - - - 0.963 0.732 -

Mlig455_038235 {REF} {Length: 1537} {TRANSSPLICED} {Pfam: WW domain binding protein 11 [PF09429.12, score=67.1]} {Human: ENSG00000084463, WBP11, WW domain binding protein 11, [RH, Score=153, Expect=5e-40]} {Mouse: ENSMUSG00000030216, Wbp11, WW domain binding protein 11, [RH, Score=153, Expect=3e-40]} {Dmel: FBgn0024998, CG2685, [RH, Score=128, Expect=6e-32]} {Smed: dd_Smed_v6_5026_0_1, dd_Smed_v6_5026_0_1, [RH, Score=218, Expect=3e-66]} {RNA1509_12848, RNA1509_59072} {RNA1310_37508, RNA1509_12848, RNA1509_59072} {RNA1509_12848, RNA1509_59072, RNA815_29399.1}

Mlig455_038308 {REF} {Length: 2376} {Pfam: WW domain binding protein 11 [PF09429.12, score=67.1]} {Human: ENSG00000084463, WBP11, WW domain binding protein 11, [RH, Score=153, Expect=5e-40]} {Mouse: ENSMUSG00000030216, Wbp11, WW domain binding protein 11, [RH, Score=153, Expect=3e-40]} {Dmel: FBgn0024998, CG2685, [RH, Score=128, Expect=6e-32]} {Smed: dd_Smed_v6_5026_0_1, dd_Smed_v6_5026_0_1, [RH, Score=218, Expect=3e-66]} {RNA1509_12848, RNA1509_35978} {RNA1310_37508, RNA1509_35978} {RNA1509_35978, RNA815_29399.1}
3. MligTC455_45395 1764 36.76 Mlig455_001728, Mlig455_063313

Neo: -

Age: -

STK19 1.684 - 0.733 - 0.951 - -

Mlig455_001728 {REF} {Length: 1572} {RNA1509_14993} {RNA1310_24145} {RNA815_9902.1}

Mlig455_063313 {REF} {Length: 1663} {TRANSSPLICED} {Pfam: Serine-threonine protein kinase 19 [PF10494.11, score=98.7]} {Human: ENSG00000206342, STK19, serine/threonine kinase 19, [RH, Score=127, Expect=2e-34]; ENSG00000236250, STK19, serine/threonine kinase 19, [RH, Score=127, Expect=1e-34]; ENSG00000226257, STK19, serine/threonine kinase 19, [RH, Score=127, Expect=1e-34]; ENSG00000204344, STK19, serine/threonine kinase 19, [RH, Score=127, Expect=3e-34]; ENSG00000226033, STK19, serine/threonine kinase 19, [RH, Score=127, Expect=3e-34]; ENSG00000234947, STK19, serine/threonine kinase 19, [RH, Score=127, Expect=1e-34]} {Mouse: ENSMUSG00000061207, Stk19, serine/threonine kinase 19, [RH, Score=124, Expect=5e-34]} {RNA1509_14993, RNA1509_47033} {RNA1310_24145, RNA1509_14993, RNA1509_47033} {RNA1509_14993, RNA1509_47033, RNA815_9902.1}
4. MligTC455_45638 2531 52.72 Mlig455_029644

Neo: -

Age: Down-Down-Up

DLG1 0.969 - - - 0.969 - - Mlig455_029644 {REF} {Length: 2058} {TRANSSPLICED} {Pfam: Guanylate kinase [PF00625.23, score=201.1]; PDZ domain [PF00595.26, score=68.8]; PDZ domain [PF17820.3, score=26.5]; SH3 domain [PF00018.30, score=26.4]; Variant SH3 domain [PF07653.19, score=24.1]} {Human: ENSG00000075711, DLG1, discs large MAGUK scaffold protein 1, [RH, Score=516, Expect=2e-174]} {Mouse: ENSMUSG00000022770, Dlg1, discs large MAGUK scaffold protein 1, [RH, Score=513, Expect=7e-173]} {Dmel: FBgn0001624, dlg1, discs large 1, [RH, Score=540, Expect=0.0]} {Celegans: WBGene00001006, dlg-1, Drosophila Discs LarGe homolog; MAGUK protein DLG-1; SAP97-like protein DLG-1, [Score=385, Expect=2e-123]} {Smed: dd_Smed_v6_8511_0_1, dd_Smed_v6_8511_0_1, [Score=352, Expect=1e-115]} {RNA1509_15416, RNA1509_25751, RNA1509_41994, RNA1509_6874} {RNA1310_21812.1, RNA1509_15416, RNA1509_25751, RNA1509_41994, RNA1509_6874} {RNA1509_15416, RNA1509_25751, RNA1509_41994, RNA1509_6874, RNA815_12065.1}
5. MligTC455_44104 493 10.27 Mlig455_067786

Neo: Int S/G2/M

Age: Down-Up-Up

0.957 - - - 0.957 - - Mlig455_067786 {REF} {Length: 1267} {TRANSSPLICED} {Pfam: Proteasome assembly chaperone 4 [PF16094.7, score=136.9]} {Smed: dd_Smed_v6_8414_0_1, dd_Smed_v6_8414_0_1, [RH, Score=64.3, Expect=6e-12]} {RNA1509_19745} {RNA1310_9215} {RNA815_22970}
6. MligTC455_27716 2493 51.93 Mlig455_002004, Mlig455_002097, Mlig455_002206

Neo: Int S/G2/M

Age: -

DDX56 0.955 - - - 0.955 - -

Mlig455_002004 {REF} {Length: 2518} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=121.1]; Helicase conserved C-terminal domain [PF00271.33, score=95.6]; Type III restriction enzyme, res subunit [PF04851.17, score=21.7]} {Human: ENSG00000136271, DDX56, DEAD-box helicase 56, [RH, Score=470, Expect=1e-159]} {Mouse: ENSMUSG00000004393, Ddx56, DEAD (Asp-Glu-Ala-Asp) box polypeptide 56, [RH, Score=474, Expect=2e-161]} {Dmel: FBgn0001565, Hlc, Helicase, [RH, Score=451, Expect=3e-152]} {Celegans: WBGene00016073, C24H12.4, [RH, Score=360, Expect=4e-116]} {Smed: dd_Smed_v6_6948_0_1, dd_Smed_v6_6948_0_1, [RH, Score=396, Expect=4e-132]} {RNA1509_16619} {RNA1310_7902, RNA1509_16619} {RNA1509_16619, RNA815_1492.1}

Mlig455_002097 {REF} {Length: 2699} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=121.1]; Helicase conserved C-terminal domain [PF00271.33, score=95.5]; Type III restriction enzyme, res subunit [PF04851.17, score=21.7]} {Human: ENSG00000136271, DDX56, DEAD-box helicase 56, [RH, Score=471, Expect=4e-160]} {Mouse: ENSMUSG00000004393, Ddx56, DEAD (Asp-Glu-Ala-Asp) box polypeptide 56, [RH, Score=474, Expect=2e-161]} {Dmel: FBgn0001565, Hlc, Helicase, [RH, Score=450, Expect=5e-152]} {Celegans: WBGene00016073, C24H12.4, [RH, Score=361, Expect=1e-116]} {Smed: dd_Smed_v6_6948_0_1, dd_Smed_v6_6948_0_1, [RH, Score=396, Expect=5e-132]} {RNA1509_10761, RNA1509_32998} {RNA1310_7902, RNA1509_10761, RNA1509_32998} {RNA1509_10761, RNA1509_32998, RNA815_1492.1}

Mlig455_002206 {REF} {Length: 2201} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=121.1]; Helicase conserved C-terminal domain [PF00271.33, score=95.6]; Type III restriction enzyme, res subunit [PF04851.17, score=21.7]} {Human: ENSG00000136271, DDX56, DEAD-box helicase 56, [RH, Score=470, Expect=1e-159]} {Mouse: ENSMUSG00000004393, Ddx56, DEAD (Asp-Glu-Ala-Asp) box polypeptide 56, [RH, Score=474, Expect=2e-161]} {Dmel: FBgn0001565, Hlc, Helicase, [RH, Score=451, Expect=3e-152]} {Celegans: WBGene00016073, C24H12.4, [RH, Score=360, Expect=4e-116]} {Smed: dd_Smed_v6_6948_0_1, dd_Smed_v6_6948_0_1, [RH, Score=396, Expect=4e-132]} {RNA1509_32998} {RNA1310_7902} {RNA815_1492.1}
7. MligTC455_24225 919 19.15 Mlig455_040985

Neo: -

Age: logFC(26M/2M)=0.529

Region-enriched R5: 1.655/0.00002

EIF3J 0.952 - - - 0.952 - - Mlig455_040985 {REF} {Length: 2177} {TRANSSPLICED} {Pfam: Translation initiation factor eIF3 subunit [PF08597.12, score=167.6]} {Human: ENSG00000104131, EIF3J, eukaryotic translation initiation factor 3 subunit J, [RH, Score=78.2, Expect=2e-16]} {Mouse: ENSMUSG00000027236, Eif3j1, eukaryotic translation initiation factor 3, subunit J1, [RH, Score=76.6, Expect=4e-16]; ENSMUSG00000043424, Eif3j2, eukaryotic translation initiation factor 3, subunit J2, [RH, Score=76.6, Expect=5e-16]} {Dmel: FBgn0027619, eIF3j, eukaryotic translation initiation factor 3 subunit j, [RH, Score=79.3, Expect=2e-17]} {Smed: dd_Smed_v6_930_0_1, dd_Smed_v6_930_0_1, [RH, Score=61.2, Expect=3e-11]} {RNA1509_31641, RNA1509_34834, RNA1509_36522} {RNA1310_35319, RNA1509_31641, RNA1509_34834, RNA1509_36522} {RNA1509_31641, RNA1509_34834, RNA1509_36522, RNA815_17074.1}
8. MligTC455_50625 599 12.48 Mlig455_054033

Neo: -

Age: -

0.951 - - - 0.951 - - Mlig455_054033 {REF} {Length: 743} {TRANSSPLICED} {RNA1509_38253} {RNA1310_44853} {RNA815_23204}
9. MligTC455_51148 51 1.06 Mlig455_020351

Neo: -

Age: -

0.95 - - - - 0.950 - Mlig455_020351 {REF} {Length: 738} {NoTransDecoderORF} {RNA1509_51494} {RNA1310_38751}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA