Data search


search
Exact
Search

Results for MligTC455_51373

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_51373 652 13.58 Mlig455_007671

Neo: -

Age: -

Region-enriched R5: 1.045/0.01515

Mlig455_007671 {REF} {Length: 1918} {NoTransDecoderORF} {RNA1509_4361} {RNA1310_5239.1} {RNA815_4059}

Cumulative graph for MligTC455_51373

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.079 4.007 0.36755 1.00000
RegionR2 0.802 4.007 0.09126 0.37086
RegionR3 -0.945 4.007 0.04204 0.35754
RegionR4 -1.152 4.007 0.01587 0.08605
RegionR5 1.045 4.007 0.00166 0.01515
RegionR6 0.962 4.007 0.01179 0.18557
RegionR7 0.652 4.007 0.19724 0.80406
RegionR8 -0.284 4.007 0.70617 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.466 4.007 0.50772 1.00000
RegenerationR2 -0.017 4.007 0.96202 1.00000
RegenerationR3 0.707 4.007 0.13502 0.55878
RegenerationR4 0.695 4.007 0.11749 0.52275
RegenerationR5 0.019 4.007 0.95788 1.00000
RegenerationR6 -0.12 4.007 0.76154 0.95734
RegenerationBL -1.562 4.007 0.01557 0.13153
RegenerationTP 0.595 4.007 0.28747 0.73340


Genes with expression patterns similar to MligTC455_51373

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_51373 652 13.58 Mlig455_007671

Neo: -

Age: -

Region-enriched R5: 1.045/0.01515

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_007671 {REF} {Length: 1918} {NoTransDecoderORF} {RNA1509_4361} {RNA1310_5239.1} {RNA815_4059}
2. MligTC455_51374 1278 26.63 Mlig455_020863, Mlig455_020988

Neo: -

Age: -

Region-enriched R5: 1.058/0.00455

AP2M1 5.863 0.994 0.989 0.997 0.994 0.891 0.998

Mlig455_020863 {REF} {Length: 3231} {TRANSSPLICED} {Pfam: Adaptor complexes medium subunit family [PF00928.23, score=271.5]; Clathrin adaptor complex small chain [PF01217.22, score=28.5]} {Human: ENSG00000161203, AP2M1, adaptor related protein complex 2 subunit mu 1, [RH, Score=763, Expect=0.0]} {Mouse: ENSMUSG00000022841, Ap2m1, adaptor-related protein complex 2, mu 1 subunit, [RH, Score=763, Expect=0.0]} {Dmel: FBgn0263351, AP-2mu, Adaptor Protein complex 2, mu subunit, [RH, Score=764, Expect=0.0]} {Celegans: WBGene00001082, dpy-23, AP-2 complex subunit mu, [RH, Score=736, Expect=0.0]} {Smed: dd_Smed_v6_1271_0_1, dd_Smed_v6_1271_0_1, [RH, Score=751, Expect=0.0]} {RNA1509_4361} {RNA1310_5239.1} {RNA815_4059}

Mlig455_020988 {REF} {Length: 3247} {TRANSSPLICED} {Pfam: Adaptor complexes medium subunit family [PF00928.23, score=271.5]; Clathrin adaptor complex small chain [PF01217.22, score=28.5]} {Human: ENSG00000161203, AP2M1, adaptor related protein complex 2 subunit mu 1, [RH, Score=763, Expect=0.0]} {Mouse: ENSMUSG00000022841, Ap2m1, adaptor-related protein complex 2, mu 1 subunit, [RH, Score=763, Expect=0.0]} {Dmel: FBgn0263351, AP-2mu, Adaptor Protein complex 2, mu subunit, [RH, Score=764, Expect=0.0]} {Celegans: WBGene00001082, dpy-23, AP-2 complex subunit mu, [RH, Score=736, Expect=0.0]} {Smed: dd_Smed_v6_1271_0_1, dd_Smed_v6_1271_0_1, [RH, Score=751, Expect=0.0]} {RNA1509_4361, RNA1509_52428} {RNA1310_5239.1, RNA1509_52428} {RNA1509_52428, RNA815_4059}
3. MligTC455_51375 617 12.85 Mlig455_020906

Neo: -

Age: -

Region-enriched R5: 1.060/0.01134

AP2M1 5.677 0.977 0.978 0.983 0.977 0.801 0.961 Mlig455_020906 {REF} {Length: 3249} {TRANSSPLICED} {Pfam: Adaptor complexes medium subunit family [PF00928.23, score=271.5]; Clathrin adaptor complex small chain [PF01217.22, score=28.5]} {Human: ENSG00000161203, AP2M1, adaptor related protein complex 2 subunit mu 1, [RH, Score=763, Expect=0.0]} {Mouse: ENSMUSG00000022841, Ap2m1, adaptor-related protein complex 2, mu 1 subunit, [RH, Score=763, Expect=0.0]} {Dmel: FBgn0263351, AP-2mu, Adaptor Protein complex 2, mu subunit, [RH, Score=764, Expect=0.0]} {Celegans: WBGene00001082, dpy-23, AP-2 complex subunit mu, [RH, Score=736, Expect=0.0]} {Smed: dd_Smed_v6_1271_0_1, dd_Smed_v6_1271_0_1, [RH, Score=751, Expect=0.0]} {RNA1509_4361} {RNA1310_5239.1, RNA1509_4361} {RNA1509_4361, RNA815_4059}
4. MligTC455_26127 781 16.27 Mlig455_043389, Mlig455_043396, Mlig455_043413

Neo: -

Age: logFC(26M/2M)=0.375

Region-enriched R5: 1.786/0.00899

RUSC1 1.867 - - 0.914 0.953 - -

Mlig455_043389 {REF} {Length: 5423} {TRANSSPLICED} {Pfam: RUN domain [PF02759.21, score=45.2]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=19.7]} {Mouse: ENSMUSG00000041263, Rusc1, RUN and SH3 domain containing 1, [RH, Score=51.6, Expect=6e-06]} {Smed: dd_Smed_v6_4870_0_1, dd_Smed_v6_4870_0_1, [RH, Score=100, Expect=2e-21]} {RNA1509_17812} {RNA1310_16037.1} {RNA815_8846}

Mlig455_043396 {REF} {Length: 5466} {TRANSSPLICED} {Pfam: RUN domain [PF02759.21, score=45.2]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=19.6]} {Mouse: ENSMUSG00000041263, Rusc1, RUN and SH3 domain containing 1, [RH, Score=51.6, Expect=5e-06]} {Smed: dd_Smed_v6_4870_0_1, dd_Smed_v6_4870_0_1, [RH, Score=99.4, Expect=4e-21]} {RNA1509_17812} {RNA1310_16037.1} {RNA815_8846}

Mlig455_043413 {REF} {Length: 5105} {TRANSSPLICED} {Pfam: RUN domain [PF02759.21, score=45.4]} {Human: ENSG00000160753, RUSC1, RUN and SH3 domain containing 1, [RH, Score=50.8, Expect=1e-05]} {Mouse: ENSMUSG00000041263, Rusc1, RUN and SH3 domain containing 1, [RH, Score=52.0, Expect=4e-06]} {Smed: dd_Smed_v6_4870_0_1, dd_Smed_v6_4870_0_1, [RH, Score=98.6, Expect=6e-21]} {RNA1509_17812, RNA1509_28469} {RNA1310_16037.1, RNA1509_28469} {RNA1509_28469, RNA815_8846}
5. MligTC455_44561 1920 40 Mlig455_057194

Neo: -

Age: logFC(26M/2M)=0.185

NBR1 1.83 - - 0.867 0.963 - - Mlig455_057194 {REF} {Length: 3269} {Pfam: Zinc finger, ZZ type [PF00569.19, score=41.7]; UBA/TS-N domain [PF00627.33, score=19.6]} {Human: ENSG00000188554, NBR1, NBR1, autophagy cargo receptor, [RH, Score=60.5, Expect=1e-08]} {Mouse: ENSMUSG00000015837, Sqstm1, sequestosome 1, [Score=64.7, Expect=2e-10]} {Dmel: FBgn0003231, ref(2)P, refractory to sigma P, [Score=55.5, Expect=1e-07]} {Celegans: WBGene00011737, sqst-1, SeQueSTosome related, [RH, Score=62.8, Expect=6e-10]} {Smed: dd_Smed_v6_2812_0_1, dd_Smed_v6_2812_0_1, [RH, Score=54.7, Expect=7e-08]} {RNA1509_10260, RNA1509_33571} {RNA1310_6559, RNA1509_10260, RNA1509_33571} {RNA1509_10260, RNA1509_33571, RNA815_1176}
6. MligTC455_50849 2823 58.81 Mlig455_001560, Mlig455_071161

Neo: -

Age: -

RHEB 1.793 - - - 0.953 - 0.840

Mlig455_001560 {REF} {Length: 1882} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=129.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=47.7]; ADP-ribosylation factor family [PF00025.23, score=36.4]; RsgA GTPase [PF03193.18, score=33.6]; Elongation factor Tu GTP binding domain [PF00009.29, score=29.5]; 50S ribosome-binding GTPase [PF01926.25, score=23.7]; Centromere protein M (CENP-M) [PF11111.10, score=19.0]} {Human: ENSG00000106615, RHEB, Ras homolog, mTORC1 binding, [RH, Score=142, Expect=6e-43]} {Mouse: ENSMUSG00000028945, Rheb, Ras homolog enriched in brain, [Score=143, Expect=3e-43]} {Dmel: FBgn0041191, Rheb, Ras homolog enriched in brain, [Score=134, Expect=9e-40]} {Celegans: WBGene00010038, rheb-1, GTP-binding protein Rheb homolog 1, [RH, Score=131, Expect=9e-39]} {Smed: dd_Smed_v6_1239_0_1, dd_Smed_v6_1239_0_1, [Score=116, Expect=5e-33]} {RNA1509_13456} {RNA1310_11601} {RNA815_3397.1}

Mlig455_071161 {REF} {Length: 1893} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=129.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=47.7]; ADP-ribosylation factor family [PF00025.23, score=36.4]; RsgA GTPase [PF03193.18, score=33.6]; Elongation factor Tu GTP binding domain [PF00009.29, score=29.5]; 50S ribosome-binding GTPase [PF01926.25, score=23.7]; Centromere protein M (CENP-M) [PF11111.10, score=19.0]} {Human: ENSG00000106615, RHEB, Ras homolog, mTORC1 binding, [RH, Score=142, Expect=6e-43]} {Mouse: ENSMUSG00000028945, Rheb, Ras homolog enriched in brain, [Score=143, Expect=3e-43]} {Dmel: FBgn0041191, Rheb, Ras homolog enriched in brain, [Score=134, Expect=9e-40]} {Celegans: WBGene00010038, rheb-1, GTP-binding protein Rheb homolog 1, [RH, Score=131, Expect=9e-39]} {Smed: dd_Smed_v6_1239_0_1, dd_Smed_v6_1239_0_1, [Score=116, Expect=5e-33]} {RNA1509_13456, RNA1509_41744} {RNA1310_11601, RNA1509_41744} {RNA1509_41744, RNA815_3397.1}
7. MligTC455_40713 71 1.48 Mlig455_047717

Neo: -

Age: -

KCNMA1 0.957 - - - 0.957 - - Mlig455_047717 {REF} {Length: 4615} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=104.5]; Ion transport protein [PF00520.33, score=59.3]; Ion channel [PF07885.18, score=49.9]; TrkA-N domain [PF02254.20, score=22.2]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [RH, Score=976, Expect=0.0]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [Score=995, Expect=0.0]} {Dmel: FBgn0003429, slo, slowpoke, [Score=1077, Expect=0.0]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=993, Expect=0.0]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [Score=1043, Expect=0.0]} {RNA1509_27885} {RNA1310_2876} {RNA815_9989}
8. MligTC455_09481 52 1.08 Mlig455_030866

Neo: -

Age: -

TLX3 0.951 - - - - 0.951 - Mlig455_030866 {REF} {Length: 1143} {Pfam: Homeodomain [PF00046.31, score=72.0]} {Human: ENSG00000164438, TLX3, T cell leukemia homeobox 3, [RH, Score=172, Expect=3e-51]; ENSG00000107807, TLX1, T cell leukemia homeobox 1, [RH, Score=166, Expect=7e-49]} {Mouse: ENSMUSG00000040610, Tlx3, T cell leukemia, homeobox 3, [RH, Score=172, Expect=2e-51]; ENSMUSG00000025215, Tlx1, T cell leukemia, homeobox 1, [RH, Score=166, Expect=5e-49]} {Dmel: FBgn0004863, C15, [RH, Score=174, Expect=8e-52]} {Celegans: WBGene00000434, ceh-9, Homeobox protein ceh-9, [Score=84.0, Expect=8e-20]} {Smed: dd_Smed_v6_13781_0_1, dd_Smed_v6_13781_0_1, [RH, Score=183, Expect=3e-57]} {RNA1310_112071}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA