TomoSeq data search

Data search

Results for MligTC455_51383

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_51383	3985	83.03	Mlig455_056039, Mlig455_061614	Neo: Int S/G2/M Age: - Region-enriched R4: 1.162/0.00393	PSMC5	Mlig455_056039 {REF} {Length: 2773} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=146.3]; AAA+ lid domain [PF17862.3, score=47.8]; AAA domain (Cdc48 subfamily) [PF07724.16, score=29.3]; Proteasomal ATPase OB C-terminal domain [PF16450.7, score=27.7]; AAA domain (dynein-related subfamily) [PF07728.16, score=27.5]; AAA domain [PF13401.8, score=27.3]; AAA ATPase domain [PF13191.8, score=26.7]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=21.9]; AAA domain [PF13238.8, score=19.7]; AAA domain [PF13671.8, score=18.8]} {Human: ENSG00000087191, PSMC5, proteasome 26S subunit, ATPase 5, [RH, Score=689, Expect=0.0]} {Mouse: ENSMUSG00000020708, Psmc5, protease (prosome, macropain) 26S subunit, ATPase 5, [RH, Score=688, Expect=0.0]} {Dmel: FBgn0020369, Rpt6, Regulatory particle triple-A ATPase 6, [RH, Score=712, Expect=0.0]} {Celegans: WBGene00004506, rpt-6, Proteasome Regulatory Particle, ATPase-like, [RH, Score=670, Expect=0.0]} {Smed: dd_Smed_v6_1176_0_1, dd_Smed_v6_1176_0_1, [RH, Score=691, Expect=0.0]} {RNA1509_2534} {RNA1310_13607} {RNA815_5475.1} Mlig455_061614 {REF} {Length: 4090} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=146.3]; AAA+ lid domain [PF17862.3, score=47.8]; AAA domain (Cdc48 subfamily) [PF07724.16, score=29.3]; Proteasomal ATPase OB C-terminal domain [PF16450.7, score=27.7]; AAA domain (dynein-related subfamily) [PF07728.16, score=27.5]; AAA domain [PF13401.8, score=27.3]; AAA ATPase domain [PF13191.8, score=26.7]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=21.9]; AAA domain [PF13238.8, score=19.7]; AAA domain [PF13671.8, score=18.8]} {Human: ENSG00000087191, PSMC5, proteasome 26S subunit, ATPase 5, [RH, Score=689, Expect=0.0]} {Mouse: ENSMUSG00000020708, Psmc5, protease (prosome, macropain) 26S subunit, ATPase 5, [RH, Score=688, Expect=0.0]} {Dmel: FBgn0020369, Rpt6, Regulatory particle triple-A ATPase 6, [RH, Score=712, Expect=0.0]} {Celegans: WBGene00004506, rpt-6, Proteasome Regulatory Particle, ATPase-like, [RH, Score=670, Expect=0.0]} {Smed: dd_Smed_v6_1176_0_1, dd_Smed_v6_1176_0_1, [RH, Score=691, Expect=0.0]} {RNA1509_2534, RNA1509_29461} {RNA1310_13607, RNA1509_2534, RNA1509_29461} {RNA1509_2534, RNA1509_29461, RNA815_5475.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_51383

3985

83.03

Mlig455_056039, Mlig455_061614

Neo: Int S/G2/M

Age: -

Region-enriched R4: 1.162/0.00393

PSMC5

Mlig455_056039 {REF} {Length: 2773} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=146.3]; AAA+ lid domain [PF17862.3, score=47.8]; AAA domain (Cdc48 subfamily) [PF07724.16, score=29.3]; Proteasomal ATPase OB C-terminal domain [PF16450.7, score=27.7]; AAA domain (dynein-related subfamily) [PF07728.16, score=27.5]; AAA domain [PF13401.8, score=27.3]; AAA ATPase domain [PF13191.8, score=26.7]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=21.9]; AAA domain [PF13238.8, score=19.7]; AAA domain [PF13671.8, score=18.8]} {Human: ENSG00000087191, PSMC5, proteasome 26S subunit, ATPase 5, [RH, Score=689, Expect=0.0]} {Mouse: ENSMUSG00000020708, Psmc5, protease (prosome, macropain) 26S subunit, ATPase 5, [RH, Score=688, Expect=0.0]} {Dmel: FBgn0020369, Rpt6, Regulatory particle triple-A ATPase 6, [RH, Score=712, Expect=0.0]} {Celegans: WBGene00004506, rpt-6, Proteasome Regulatory Particle, ATPase-like, [RH, Score=670, Expect=0.0]} {Smed: dd_Smed_v6_1176_0_1, dd_Smed_v6_1176_0_1, [RH, Score=691, Expect=0.0]} {RNA1509_2534} {RNA1310_13607} {RNA815_5475.1}

Mlig455_061614 {REF} {Length: 4090} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=146.3]; AAA+ lid domain [PF17862.3, score=47.8]; AAA domain (Cdc48 subfamily) [PF07724.16, score=29.3]; Proteasomal ATPase OB C-terminal domain [PF16450.7, score=27.7]; AAA domain (dynein-related subfamily) [PF07728.16, score=27.5]; AAA domain [PF13401.8, score=27.3]; AAA ATPase domain [PF13191.8, score=26.7]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=21.9]; AAA domain [PF13238.8, score=19.7]; AAA domain [PF13671.8, score=18.8]} {Human: ENSG00000087191, PSMC5, proteasome 26S subunit, ATPase 5, [RH, Score=689, Expect=0.0]} {Mouse: ENSMUSG00000020708, Psmc5, protease (prosome, macropain) 26S subunit, ATPase 5, [RH, Score=688, Expect=0.0]} {Dmel: FBgn0020369, Rpt6, Regulatory particle triple-A ATPase 6, [RH, Score=712, Expect=0.0]} {Celegans: WBGene00004506, rpt-6, Proteasome Regulatory Particle, ATPase-like, [RH, Score=670, Expect=0.0]} {Smed: dd_Smed_v6_1176_0_1, dd_Smed_v6_1176_0_1, [RH, Score=691, Expect=0.0]} {RNA1509_2534, RNA1509_29461} {RNA1310_13607, RNA1509_2534, RNA1509_29461} {RNA1509_2534, RNA1509_29461, RNA815_5475.1}

Cumulative graph for MligTC455_51383

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.864	6.505	0.10431	0.67864
RegionR2	0.002	6.505	0.99447	1.00000
RegionR3	0.284	6.505	0.32416	0.86155
RegionR4	1.162	6.505	0.00029	0.00393
RegionR5	0.288	6.505	0.29332	0.62608
RegionR6	0.016	6.505	0.95490	1.00000
RegionR7	-0.395	6.505	0.21910	0.83904
RegionR8	-0.493	6.505	0.19342	0.78725

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.014	6.505	0.98501	1.00000
RegenerationR2	0.073	6.505	0.83352	0.99897
RegenerationR3	-0.001	6.505	0.99686	1.00000
RegenerationR4	-0.628	6.505	0.09416	0.47806
RegenerationR5	0.104	6.505	0.76858	0.97855
RegenerationR6	0.161	6.505	0.65701	0.90174
RegenerationBL	0.475	6.505	0.15820	0.47636
RegenerationTP	0.833	6.505	0.02254	0.25516

Genes with expression patterns similar to MligTC455_51383

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_51383	3985	83.03	Mlig455_056039, Mlig455_061614	Neo: Int S/G2/M Age: - Region-enriched R4: 1.162/0.00393	PSMC5	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_056039 {REF} {Length: 2773} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=146.3]; AAA+ lid domain [PF17862.3, score=47.8]; AAA domain (Cdc48 subfamily) [PF07724.16, score=29.3]; Proteasomal ATPase OB C-terminal domain [PF16450.7, score=27.7]; AAA domain (dynein-related subfamily) [PF07728.16, score=27.5]; AAA domain [PF13401.8, score=27.3]; AAA ATPase domain [PF13191.8, score=26.7]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=21.9]; AAA domain [PF13238.8, score=19.7]; AAA domain [PF13671.8, score=18.8]} {Human: ENSG00000087191, PSMC5, proteasome 26S subunit, ATPase 5, [RH, Score=689, Expect=0.0]} {Mouse: ENSMUSG00000020708, Psmc5, protease (prosome, macropain) 26S subunit, ATPase 5, [RH, Score=688, Expect=0.0]} {Dmel: FBgn0020369, Rpt6, Regulatory particle triple-A ATPase 6, [RH, Score=712, Expect=0.0]} {Celegans: WBGene00004506, rpt-6, Proteasome Regulatory Particle, ATPase-like, [RH, Score=670, Expect=0.0]} {Smed: dd_Smed_v6_1176_0_1, dd_Smed_v6_1176_0_1, [RH, Score=691, Expect=0.0]} {RNA1509_2534} {RNA1310_13607} {RNA815_5475.1} Mlig455_061614 {REF} {Length: 4090} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=146.3]; AAA+ lid domain [PF17862.3, score=47.8]; AAA domain (Cdc48 subfamily) [PF07724.16, score=29.3]; Proteasomal ATPase OB C-terminal domain [PF16450.7, score=27.7]; AAA domain (dynein-related subfamily) [PF07728.16, score=27.5]; AAA domain [PF13401.8, score=27.3]; AAA ATPase domain [PF13191.8, score=26.7]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=21.9]; AAA domain [PF13238.8, score=19.7]; AAA domain [PF13671.8, score=18.8]} {Human: ENSG00000087191, PSMC5, proteasome 26S subunit, ATPase 5, [RH, Score=689, Expect=0.0]} {Mouse: ENSMUSG00000020708, Psmc5, protease (prosome, macropain) 26S subunit, ATPase 5, [RH, Score=688, Expect=0.0]} {Dmel: FBgn0020369, Rpt6, Regulatory particle triple-A ATPase 6, [RH, Score=712, Expect=0.0]} {Celegans: WBGene00004506, rpt-6, Proteasome Regulatory Particle, ATPase-like, [RH, Score=670, Expect=0.0]} {Smed: dd_Smed_v6_1176_0_1, dd_Smed_v6_1176_0_1, [RH, Score=691, Expect=0.0]} {RNA1509_2534, RNA1509_29461} {RNA1310_13607, RNA1509_2534, RNA1509_29461} {RNA1509_2534, RNA1509_29461, RNA815_5475.1}
2.	MligTC455_36460	1971	41.07	Mlig455_012388	Neo: - Age: -	NDUFA13	0.951	-	-	-	0.951	-	-	Mlig455_012388 {REF} {Length: 972} {TRANSSPLICED} {Pfam: GRIM-19 protein [PF06212.14, score=127.5]; BolA-like protein [PF01722.20, score=39.3]} {Human: ENSG00000186010, NDUFA13, NADH:ubiquinone oxidoreductase subunit A13, [RH, Score=78.2, Expect=2e-17]} {Mouse: ENSMUSG00000036199, Ndufa13, NADH:ubiquinone oxidoreductase subunit A13, [RH, Score=75.5, Expect=1e-16]} {Dmel: FBgn0029868, ND-B16.6, NADH dehydrogenase (ubiquinone) B16.6 subunit, [RH, Score=83.6, Expect=1e-19]} {Celegans: WBGene00016393, C34B2.8, [RH, Score=80.1, Expect=3e-18]} {Smed: dd_Smed_v6_1256_0_1, dd_Smed_v6_1256_0_1, [RH, Score=107, Expect=7e-29]} {RNA1509_2603} {RNA1310_37900} {RNA815_20967}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_51383

3985

83.03

Mlig455_056039, Mlig455_061614

Neo: Int S/G2/M

Age: -

Region-enriched R4: 1.162/0.00393

PSMC5

1.000

MligTC455_36460

1971

41.07

Mlig455_012388

Neo: -

Age: -

NDUFA13

0.951

Mlig455_012388 {REF} {Length: 972} {TRANSSPLICED} {Pfam: GRIM-19 protein [PF06212.14, score=127.5]; BolA-like protein [PF01722.20, score=39.3]} {Human: ENSG00000186010, NDUFA13, NADH:ubiquinone oxidoreductase subunit A13, [RH, Score=78.2, Expect=2e-17]} {Mouse: ENSMUSG00000036199, Ndufa13, NADH:ubiquinone oxidoreductase subunit A13, [RH, Score=75.5, Expect=1e-16]} {Dmel: FBgn0029868, ND-B16.6, NADH dehydrogenase (ubiquinone) B16.6 subunit, [RH, Score=83.6, Expect=1e-19]} {Celegans: WBGene00016393, C34B2.8, [RH, Score=80.1, Expect=3e-18]} {Smed: dd_Smed_v6_1256_0_1, dd_Smed_v6_1256_0_1, [RH, Score=107, Expect=7e-29]} {RNA1509_2603} {RNA1310_37900} {RNA815_20967}