TomoSeq data search

Data search

Results for MligTC455_51408

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_51408

184

3.83

Mlig455_057455

Neo: -

Age: -

Mlig455_057455 {REF} {Length: 1873} {NoTransDecoderORF} {RNA1509_32032} {RNA1310_5053.2} {RNA815_41812}

Cumulative graph for MligTC455_51408

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-7.015	2.651	0.06534	0.57759
RegionR2	1.509	2.651	0.13787	0.46113
RegionR3	1.252	2.651	0.12656	0.61260
RegionR4	0.572	2.651	0.56536	0.88466
RegionR5	1.117	2.651	0.15383	0.41004
RegionR6	1.029	2.651	0.24970	0.83581
RegionR7	0.195	2.651	0.78709	1.00000
RegionR8	1.341	2.651	0.21643	0.82100

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.666	2.651	0.99970	1.00000
RegenerationR2	-0.184	2.651	0.74634	0.97198
RegenerationR3	-0.018	2.651	0.97951	1.00000
RegenerationR4	-0.751	2.651	0.29436	0.73776
RegenerationR5	-0.258	2.651	0.66272	0.93725
RegenerationR6	-0.989	2.651	0.19983	0.54039
RegenerationBL	0.264	2.651	0.76702	1.00000
RegenerationTP	-0.957	2.651	0.37513	0.81155

Genes with expression patterns similar to MligTC455_51408

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_51408	184	3.83	Mlig455_057455	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_057455 {REF} {Length: 1873} {NoTransDecoderORF} {RNA1509_32032} {RNA1310_5053.2} {RNA815_41812}
2.	MligTC455_51409	193	4.02	Mlig455_057547	Neo: Int S/G2/M Age: Down-Up-Up	MAFK	2.779	1.000	0.998	-	0.781	-	-	Mlig455_057547 {REF} {Length: 1237} {TRANSSPLICED} {Pfam: bZIP Maf transcription factor [PF03131.19, score=51.1]} {Human: ENSG00000198517, MAFK, MAF bZIP transcription factor K, [Score=48.5, Expect=4e-07]; ENSG00000185022, MAFF, MAF bZIP transcription factor F, [Score=47.8, Expect=1e-06]} {Mouse: ENSMUSG00000018143, Mafk, v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian), [Score=48.9, Expect=2e-07]} {Dmel: FBgn0034534, maf-S, [Score=47.0, Expect=6e-07]} {RNA1509_32032} {RNA1310_36441} {RNA815_27710}
3.	MligTC455_41731	613	12.76	Mlig455_030795	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.289		1.761	-	-	-	0.788	0.973	-	Mlig455_030795 {REF} {Length: 2499} {Celegans: WBGene00019479, K07C11.7, UPF0046 protein K07C11.7, [Score=47.0, Expect=9e-06]} {RNA1509_15168, RNA1509_38284, RNA1509_46158} {RNA1310_11530, RNA1509_15168, RNA1509_38284, RNA1509_46158} {RNA1509_15168, RNA1509_38284, RNA1509_46158, RNA815_4956.1}
4.	MligTC455_50312	1267	26.39	Mlig455_010393, Mlig455_028009	Neo: - Age: Up-Up-Down	EDC3	1.74	-	-	-	0.790	-	0.950	Mlig455_010393 {REF} {Length: 3940} {TRANSSPLICED} {Pfam: YjeF-related protein N-terminus [PF03853.17, score=52.8]} {Human: ENSG00000179151, EDC3, enhancer of mRNA decapping 3, [RH, Score=172, Expect=8e-47]} {Mouse: ENSMUSG00000038957, Edc3, enhancer of mRNA decapping 3, [RH, Score=171, Expect=6e-47]} {Dmel: FBgn0036735, Edc3, Enhancer of decapping 3, [RH, Score=152, Expect=3e-39]} {RNA1509_17676} {RNA1310_16902} {RNA815_6868} Mlig455_028009 {REF} {Length: 6904} {TRANSSPLICED} {Pfam: YjeF-related protein N-terminus [PF03853.17, score=51.8]} {Human: ENSG00000179151, EDC3, enhancer of mRNA decapping 3, [RH, Score=169, Expect=8e-46]} {Mouse: ENSMUSG00000038957, Edc3, enhancer of mRNA decapping 3, [RH, Score=170, Expect=2e-46]} {Dmel: FBgn0036735, Edc3, Enhancer of decapping 3, [RH, Score=150, Expect=2e-38]} {RNA1509_17676} {RNA1310_16902, RNA1509_17676} {RNA1509_17676, RNA815_6868}
5.	MligTC455_48759	303	6.32	Mlig455_065645	Neo: - Age: -	ARF6	0.969	-	-	-	0.969	-	-	Mlig455_065645 {REF} {Length: 2084} {TRANSSPLICED} {Pfam: ADP-ribosylation factor family [PF00025.23, score=247.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=55.7]; Ras family [PF00071.24, score=50.7]; Signal recognition particle receptor beta subunit [PF09439.12, score=45.8]; G-protein alpha subunit [PF00503.22, score=38.6]; Gtr1/RagA G protein conserved region [PF04670.14, score=33.9]; 50S ribosome-binding GTPase [PF01926.25, score=24.2]; 6-phosphofructo-2-kinase [PF01591.20, score=18.1]} {Human: ENSG00000165527, ARF6, ADP ribosylation factor 6, [RH, Score=301, Expect=7e-106]} {Mouse: ENSMUSG00000044147, Arf6, ADP-ribosylation factor 6, [RH, Score=301, Expect=5e-106]} {Dmel: FBgn0013750, Arf51F, ADP ribosylation factor at 51F, [RH, Score=296, Expect=4e-104]} {Celegans: WBGene00000184, arf-6, ADP-Ribosylation Factor related, [RH, Score=292, Expect=1e-102]} {Smed: dd_Smed_v6_2125_0_1, dd_Smed_v6_2125_0_1, [RH, Score=279, Expect=1e-97]} {RNA1509_10836} {RNA1310_23391, RNA1509_10836} {RNA1509_10836, RNA815_10077}
6.	MligTC455_51378	237	4.94	Mlig455_065169, Mlig455_065171	Neo: - Age: Up-Down-Up	GRIN1	0.963	-	-	-	-	0.963	-	Mlig455_065169 {REF} {Length: 3243} {Pfam: Calmodulin-binding domain C0 of NMDA receptor NR1 subunit [PF10562.11, score=45.1]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=26.7]} {Human: ENSG00000176884, GRIN1, glutamate ionotropic receptor NMDA type subunit 1, [Score=171, Expect=1e-47]} {Mouse: ENSMUSG00000026959, Grin1, glutamate receptor, ionotropic, NMDA1 (zeta 1), [Score=171, Expect=7e-48]} {Dmel: FBgn0010399, Nmdar1, NMDA receptor 1, [Score=168, Expect=4e-47]} {Celegans: WBGene00003774, nmr-1, NMDA class glutamate Receptor; NMDA-type ionotropic glutamate receptor NMR-1, [Score=138, Expect=1e-36]} {Smed: dd_Smed_v6_8187_0_3, dd_Smed_v6_8187_0_3, [RH, Score=248, Expect=4e-77]} {RNA1509_25324} {RNA1310_53103} {RNA815_23220.1} Mlig455_065171 {REF} {Length: 2901} {Pfam: Calmodulin-binding domain C0 of NMDA receptor NR1 subunit [PF10562.11, score=45.1]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=26.7]} {Human: ENSG00000176884, GRIN1, glutamate ionotropic receptor NMDA type subunit 1, [Score=171, Expect=9e-48]} {Mouse: ENSMUSG00000026959, Grin1, glutamate receptor, ionotropic, NMDA1 (zeta 1), [Score=171, Expect=6e-48]} {Dmel: FBgn0010399, Nmdar1, NMDA receptor 1, [Score=168, Expect=4e-47]} {Celegans: WBGene00003774, nmr-1, NMDA class glutamate Receptor; NMDA-type ionotropic glutamate receptor NMR-1, [Score=138, Expect=1e-36]} {Smed: dd_Smed_v6_8187_0_3, dd_Smed_v6_8187_0_3, [RH, Score=248, Expect=3e-77]} {RNA1509_25324} {RNA1310_53103} {RNA815_23220.1}
7.	MligTC455_23753	483	10.05	Mlig455_061012	Neo: Int S/G2/M Age: -	SAP30BP	0.958	-	-	-	0.958	-	-	Mlig455_061012 {REF} {Length: 2502} {TRANSSPLICED} {Pfam: HCNGP-like protein [PF07818.15, score=84.6]} {Human: ENSG00000161526, SAP30BP, SAP30 binding protein, [RH, Score=76.6, Expect=3e-15]} {Mouse: ENSMUSG00000020755, Sap30bp, SAP30 binding protein, [RH, Score=75.9, Expect=8e-15]} {Dmel: FBgn0033400, CG2063, [RH, Score=73.6, Expect=4e-14]} {Celegans: WBGene00022057, Y67D2.7, [RH, Score=64.7, Expect=2e-11]} {Smed: dd_Smed_v6_4519_0_1, dd_Smed_v6_4519_0_1, [RH, Score=75.9, Expect=7e-15]} {RNA1509_42033, RNA1509_9343} {RNA1310_13494, RNA1509_42033} {RNA1509_42033, RNA815_12485}
8.	MligTC455_37091	749	15.59	Mlig455_048237	Neo: - Age: -	RNF34	0.954	-	-	-	0.954	-	-	Mlig455_048237 {REF} {Length: 2742} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=37.7]; FYVE-type zinc finger [PF02318.18, score=19.2]} {Human: ENSG00000170633, RNF34, ring finger protein 34, [RH, Score=138, Expect=5e-38]; ENSG00000092871, RFFL, ring finger and FYVE like domain containing E3 ubiquitin protein ligase, [RH, Score=137, Expect=1e-35]; ENSG00000267618, RAD51L3-RFFL, RAD51L3-RFFL readthrough, [RH, Score=135, Expect=4e-36]} {Mouse: ENSMUSG00000029474, Rnf34, ring finger protein 34, [RH, Score=143, Expect=7e-38]; ENSMUSG00000020696, Rffl, ring finger and FYVE like domain containing protein, [RH, Score=141, Expect=2e-37]} {Dmel: FBgn0033783, CG17019, [RH, Score=134, Expect=2e-33]} {Celegans: WBGene00017342, F10D7.5, [RH, Score=62.0, Expect=3e-10]} {Smed: dd_Smed_v6_6206_0_1, dd_Smed_v6_6206_0_1, [Score=111, Expect=5e-27]} {RNA1509_16106} {RNA1310_5737.1, RNA1509_16106} {RNA1509_16106, RNA815_6542}

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