TomoSeq data search

Data search

Results for MligTC455_51476

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_51476	296	6.16	Mlig455_043746, Mlig455_047479	Neo: - Age: Down-Up-Up Region-enriched R2: 2.279/0.03121		Mlig455_043746 {REF} {Length: 2035} {TRANSSPLICED} {Pfam: Modifier of rudimentary (Mod(r)) protein [PF07200.15, score=105.5]; MYND finger [PF01753.20, score=37.3]} {Dmel: FBgn0037299, Vps37B, Vacuolar protein sorting 37B, [RH, Score=65.1, Expect=6e-12]} {Celegans: WBGene00016990, vps-37, Related to yeast Vacuolar Protein Sorting factor, [RH, Score=87.4, Expect=1e-19]} {Smed: dd_Smed_v6_2306_0_1, dd_Smed_v6_2306_0_1, [RH, Score=76.3, Expect=5e-16]} {RNA1310_27591.1} {RNA815_28058} Mlig455_047479 {REF} {Length: 2035} {TRANSSPLICED} {Pfam: Modifier of rudimentary (Mod(r)) protein [PF07200.15, score=105.5]; MYND finger [PF01753.20, score=37.3]} {Dmel: FBgn0037299, Vps37B, Vacuolar protein sorting 37B, [RH, Score=65.1, Expect=6e-12]} {Celegans: WBGene00016990, vps-37, Related to yeast Vacuolar Protein Sorting factor, [RH, Score=87.4, Expect=1e-19]} {Smed: dd_Smed_v6_2306_0_1, dd_Smed_v6_2306_0_1, [RH, Score=76.3, Expect=5e-16]} {RNA1310_27591.1} {RNA815_28058}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_51476

296

6.16

Mlig455_043746, Mlig455_047479

Neo: -

Age: Down-Up-Up

Region-enriched R2: 2.279/0.03121

Mlig455_043746 {REF} {Length: 2035} {TRANSSPLICED} {Pfam: Modifier of rudimentary (Mod(r)) protein [PF07200.15, score=105.5]; MYND finger [PF01753.20, score=37.3]} {Dmel: FBgn0037299, Vps37B, Vacuolar protein sorting 37B, [RH, Score=65.1, Expect=6e-12]} {Celegans: WBGene00016990, vps-37, Related to yeast Vacuolar Protein Sorting factor, [RH, Score=87.4, Expect=1e-19]} {Smed: dd_Smed_v6_2306_0_1, dd_Smed_v6_2306_0_1, [RH, Score=76.3, Expect=5e-16]} {RNA1310_27591.1} {RNA815_28058}

Mlig455_047479 {REF} {Length: 2035} {TRANSSPLICED} {Pfam: Modifier of rudimentary (Mod(r)) protein [PF07200.15, score=105.5]; MYND finger [PF01753.20, score=37.3]} {Dmel: FBgn0037299, Vps37B, Vacuolar protein sorting 37B, [RH, Score=65.1, Expect=6e-12]} {Celegans: WBGene00016990, vps-37, Related to yeast Vacuolar Protein Sorting factor, [RH, Score=87.4, Expect=1e-19]} {Smed: dd_Smed_v6_2306_0_1, dd_Smed_v6_2306_0_1, [RH, Score=76.3, Expect=5e-16]} {RNA1310_27591.1} {RNA815_28058}

Cumulative graph for MligTC455_51476

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.882	3.199	0.07454	0.60438
RegionR2	2.279	3.199	0.00170	0.03121
RegionR3	1.351	3.199	0.02067	0.24157
RegionR4	-1.286	3.199	0.06153	0.22204
RegionR5	0.269	3.199	0.61853	0.97439
RegionR6	1.2	3.199	0.03865	0.36886
RegionR7	-0.332	3.199	0.69682	1.00000
RegionR8	-0.598	3.199	0.58262	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-3.042	3.199	0.62997	1.00000
RegenerationR2	0.008	3.199	0.98200	1.00000
RegenerationR3	-1.076	3.199	0.13932	0.56533
RegenerationR4	-0.1	3.199	0.89129	1.00000
RegenerationR5	0.082	3.199	0.89666	1.00000
RegenerationR6	0.23	3.199	0.72633	0.93899
RegenerationBL	0.926	3.199	0.28422	0.64549
RegenerationTP	1.249	3.199	0.20284	0.64421

Genes with expression patterns similar to MligTC455_51476

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_51476	296	6.16	Mlig455_043746, Mlig455_047479	Neo: - Age: Down-Up-Up Region-enriched R2: 2.279/0.03121		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_043746 {REF} {Length: 2035} {TRANSSPLICED} {Pfam: Modifier of rudimentary (Mod(r)) protein [PF07200.15, score=105.5]; MYND finger [PF01753.20, score=37.3]} {Dmel: FBgn0037299, Vps37B, Vacuolar protein sorting 37B, [RH, Score=65.1, Expect=6e-12]} {Celegans: WBGene00016990, vps-37, Related to yeast Vacuolar Protein Sorting factor, [RH, Score=87.4, Expect=1e-19]} {Smed: dd_Smed_v6_2306_0_1, dd_Smed_v6_2306_0_1, [RH, Score=76.3, Expect=5e-16]} {RNA1310_27591.1} {RNA815_28058} Mlig455_047479 {REF} {Length: 2035} {TRANSSPLICED} {Pfam: Modifier of rudimentary (Mod(r)) protein [PF07200.15, score=105.5]; MYND finger [PF01753.20, score=37.3]} {Dmel: FBgn0037299, Vps37B, Vacuolar protein sorting 37B, [RH, Score=65.1, Expect=6e-12]} {Celegans: WBGene00016990, vps-37, Related to yeast Vacuolar Protein Sorting factor, [RH, Score=87.4, Expect=1e-19]} {Smed: dd_Smed_v6_2306_0_1, dd_Smed_v6_2306_0_1, [RH, Score=76.3, Expect=5e-16]} {RNA1310_27591.1} {RNA815_28058}
2.	MligTC455_46301	170	3.54	Mlig455_041008, Mlig455_041118	Neo: - Age: -	AGRN	0.955	-	-	-	0.955	-	-	Mlig455_041008 {REF} {Length: 3579} {Pfam: Laminin G domain [PF02210.26, score=106.1]; Laminin G domain [PF00054.25, score=102.7]; Immunoglobulin domain [PF13927.8, score=50.5]; Immunoglobulin I-set domain [PF07679.18, score=45.3]; Immunoglobulin domain [PF00047.27, score=43.6]; EGF-like domain [PF00008.29, score=43.2]; Immunoglobulin domain [PF13895.8, score=39.3]; Immunoglobulin V-set domain [PF07686.19, score=22.6]; Immunoglobulin domain [PF18452.3, score=20.1]} {Human: ENSG00000188157, AGRN, agrin, [Score=146, Expect=7e-35]} {Mouse: ENSMUSG00000028763, Hspg2, perlecan (heparan sulfate proteoglycan 2), [Score=270, Expect=2e-74]} {Dmel: FBgn0284408, trol, terribly reduced optic lobes, [RH, Score=248, Expect=2e-67]} {Celegans: WBGene00006787, unc-52, Basement membrane proteoglycan, [RH, Score=80.5, Expect=4e-15]} {Smed: dd_Smed_v6_10946_0_1, dd_Smed_v6_10946_0_1, [Score=66.2, Expect=7e-11]} {RNA1310_35624} {RNA815_55021} Mlig455_041118 {REF} {Length: 3603} {Pfam: Laminin G domain [PF02210.26, score=106.0]; Laminin G domain [PF00054.25, score=105.0]; Immunoglobulin domain [PF13927.8, score=53.1]; Immunoglobulin I-set domain [PF07679.18, score=46.8]; Immunoglobulin domain [PF00047.27, score=44.3]; Immunoglobulin domain [PF13895.8, score=40.9]; EGF-like domain [PF00008.29, score=40.7]; Immunoglobulin V-set domain [PF07686.19, score=22.6]; Immunoglobulin domain [PF18452.3, score=20.0]} {Human: ENSG00000188157, AGRN, agrin, [Score=144, Expect=3e-34]} {Mouse: ENSMUSG00000028763, Hspg2, perlecan (heparan sulfate proteoglycan 2), [Score=269, Expect=5e-74]} {Dmel: FBgn0284408, trol, terribly reduced optic lobes, [RH, Score=243, Expect=1e-65]} {Celegans: WBGene00006787, unc-52, Basement membrane proteoglycan, [RH, Score=77.8, Expect=2e-14]} {Smed: dd_Smed_v6_10946_0_1, dd_Smed_v6_10946_0_1, [Score=61.2, Expect=2e-09]} {RNA1310_35624} {RNA815_55021}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_51476

296

6.16

Mlig455_043746, Mlig455_047479

Neo: -

Age: Down-Up-Up

Region-enriched R2: 2.279/0.03121

1.000

MligTC455_46301

170

3.54

Mlig455_041008, Mlig455_041118

Neo: -

Age: -

AGRN

0.955

Mlig455_041008 {REF} {Length: 3579} {Pfam: Laminin G domain [PF02210.26, score=106.1]; Laminin G domain [PF00054.25, score=102.7]; Immunoglobulin domain [PF13927.8, score=50.5]; Immunoglobulin I-set domain [PF07679.18, score=45.3]; Immunoglobulin domain [PF00047.27, score=43.6]; EGF-like domain [PF00008.29, score=43.2]; Immunoglobulin domain [PF13895.8, score=39.3]; Immunoglobulin V-set domain [PF07686.19, score=22.6]; Immunoglobulin domain [PF18452.3, score=20.1]} {Human: ENSG00000188157, AGRN, agrin, [Score=146, Expect=7e-35]} {Mouse: ENSMUSG00000028763, Hspg2, perlecan (heparan sulfate proteoglycan 2), [Score=270, Expect=2e-74]} {Dmel: FBgn0284408, trol, terribly reduced optic lobes, [RH, Score=248, Expect=2e-67]} {Celegans: WBGene00006787, unc-52, Basement membrane proteoglycan, [RH, Score=80.5, Expect=4e-15]} {Smed: dd_Smed_v6_10946_0_1, dd_Smed_v6_10946_0_1, [Score=66.2, Expect=7e-11]} {RNA1310_35624} {RNA815_55021}

Mlig455_041118 {REF} {Length: 3603} {Pfam: Laminin G domain [PF02210.26, score=106.0]; Laminin G domain [PF00054.25, score=105.0]; Immunoglobulin domain [PF13927.8, score=53.1]; Immunoglobulin I-set domain [PF07679.18, score=46.8]; Immunoglobulin domain [PF00047.27, score=44.3]; Immunoglobulin domain [PF13895.8, score=40.9]; EGF-like domain [PF00008.29, score=40.7]; Immunoglobulin V-set domain [PF07686.19, score=22.6]; Immunoglobulin domain [PF18452.3, score=20.0]} {Human: ENSG00000188157, AGRN, agrin, [Score=144, Expect=3e-34]} {Mouse: ENSMUSG00000028763, Hspg2, perlecan (heparan sulfate proteoglycan 2), [Score=269, Expect=5e-74]} {Dmel: FBgn0284408, trol, terribly reduced optic lobes, [RH, Score=243, Expect=1e-65]} {Celegans: WBGene00006787, unc-52, Basement membrane proteoglycan, [RH, Score=77.8, Expect=2e-14]} {Smed: dd_Smed_v6_10946_0_1, dd_Smed_v6_10946_0_1, [Score=61.2, Expect=2e-09]} {RNA1310_35624} {RNA815_55021}