Data search
Results for MligTC455_51509
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_51509 | 82 | 1.70 | Mlig455_037683 | Neo: - Age: - |
Mlig455_037683 {REF} {Length: 1007} {NoTransDecoderORF} {RNA1509_9248} {RNA1310_4151.1} {RNA815_13069} |
Cumulative graph for MligTC455_51509
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.555 | 1.838 | 0.39941 | 1.00000 | |
| RegionR2 | 1.629 | 1.838 | 0.26504 | 0.64715 | |
| RegionR3 | 0.892 | 1.838 | 0.44548 | 0.95889 | |
| RegionR4 | -1.035 | 1.838 | 0.98974 | 1.00000 | |
| RegionR5 | 0.829 | 1.838 | 0.45290 | 0.81470 | |
| RegionR6 | 0.546 | 1.838 | 0.64451 | 1.00000 | |
| RegionR7 | 1.17 | 1.838 | 0.44648 | 1.00000 | |
| RegionR8 | 0.524 | 1.838 | 0.74842 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 2.02 | 1.838 | 0.99984 | 1.00000 | |
| RegenerationR2 | 1.066 | 1.838 | 0.28790 | 0.73088 | |
| RegenerationR3 | 2.015 | 1.838 | 0.08203 | 0.46943 | |
| RegenerationR4 | 2.088 | 1.838 | 0.10295 | 0.49601 | |
| RegenerationR5 | 1.1 | 1.838 | 0.27916 | 0.70868 | |
| RegenerationR6 | 1.981 | 1.838 | 0.07795 | 0.34878 | |
| RegenerationBL | 1.251 | 1.838 | 0.39844 | 0.76733 | |
| RegenerationTP | 0.433 | 1.838 | 0.79089 | 1.00000 |
Genes with expression patterns similar to MligTC455_51509
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_51509 | 82 | 1.7 | Mlig455_037683 | Neo: - Age: - |
5 | 1.000 | 1.000 | - | 1.000 | 1.000 | 1.000 | Mlig455_037683 {REF} {Length: 1007} {NoTransDecoderORF} {RNA1509_9248} {RNA1310_4151.1} {RNA815_13069} | |
| 2. | MligTC455_38759 | 468 | 9.76 | Mlig455_005244 | Neo: - Age: logFC(26M/2M)=0.345 Region-enriched R4: 1.831/0.00456 |
SARDH | 1.742 | - | - | - | 0.778 | 0.964 | - | Mlig455_005244 {REF} {Length: 4010} {TRANSSPLICED} {Pfam: Aminomethyltransferase folate-binding domain [PF01571.23, score=200.2]; FAD dependent oxidoreductase [PF01266.26, score=161.0]; FAD dependent oxidoreductase central domain [PF16350.7, score=68.2]; Glycine cleavage T-protein C-terminal barrel domain [PF08669.13, score=34.8]} {Human: ENSG00000123453, SARDH, sarcosine dehydrogenase, [RH, Score=954, Expect=0.0]} {Mouse: ENSMUSG00000009614, Sardh, sarcosine dehydrogenase, [RH, Score=953, Expect=0.0]} {Dmel: FBgn0034276, Sardh, Sarcosine dehydrogenase, [RH, Score=751, Expect=0.0]} {Celegans: WBGene00013718, pdpr-1, Pyruvate Dehydrogenase Phosphatase Regulatory subunit, [RH, Score=269, Expect=8e-78]} {Smed: dd_Smed_v6_4280_0_1, dd_Smed_v6_4280_0_1, [RH, Score=924, Expect=0.0]} {RNA1509_17513, RNA1509_40494} {RNA1310_2390.1, RNA1509_17513, RNA1509_40494} {RNA1509_17513, RNA1509_40494, RNA815_1743} |
| 3. | MligTC455_22415 | 512 | 10.67 | Mlig455_008652, Mlig455_069418 | Neo: - Age: - |
RAB1A, RAB1B | 0.963 | - | - | - | 0.963 | - | - | Mlig455_008652 {REF} {Length: 6906} {Pfam: Ras family [PF00071.24, score=587.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=389.6]; ADP-ribosylation factor family [PF00025.23, score=200.9]; 50S ribosome-binding GTPase [PF01926.25, score=108.0]; RsgA GTPase [PF03193.18, score=66.8]; Elongation factor Tu GTP binding domain [PF00009.29, score=63.6]; Gtr1/RagA G protein conserved region [PF04670.14, score=52.7]; AAA domain [PF13401.8, score=51.9]; AAA ATPase domain [PF13191.8, score=51.0]; Bacterial TniB protein [PF05621.13, score=45.5]; NACHT domain [PF05729.14, score=44.6]; P-loop containing dynein motor region [PF12775.9, score=42.5]; P-loop containing region of AAA domain [PF13555.8, score=42.0]; MCM P-loop domain [PF00493.25, score=41.8]; ABC transporter [PF00005.29, score=40.9]; AAA domain (dynein-related subfamily) [PF07728.16, score=39.2]; Caspase recruitment domain [PF00619.23, score=36.1]; AAA domain [PF13671.8, score=32.9]; Sigma-54 interaction domain [PF00158.28, score=32.7]; Protein of unknown function (DUF815) [PF05673.15, score=30.6]; Septin [PF00735.20, score=30.3]; AAA domain [PF13479.8, score=30.1]; G-protein alpha subunit [PF00503.22, score=29.2]; RNA helicase [PF00910.24, score=28.1]; Ethanolamine utilisation - propanediol utilisation [PF10662.11, score=25.5]; Threonylcarbamoyl adenosine biosynthesis protein TsaE [PF02367.19, score=23.3]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=22.1]; Mitochondrial ribosomal death-associated protein 3 [PF10236.11, score=21.9]; AAA domain [PF13173.8, score=20.0]; Interferon-inducible GTPase (IIGP) [PF05049.15, score=19.8]; AAA domain [PF13238.8, score=19.2]; Conserved hypothetical ATP binding protein [PF03029.19, score=18.6]; Family of unknown function (DUF5838) [PF19156.2, score=18.5]} {Human: ENSG00000138069, RAB1A, RAB1A, member RAS oncogene family, [Score=161, Expect=2e-44]; ENSG00000174903, RAB1B, RAB1B, member RAS oncogene family, [Score=160, Expect=4e-44]; ENSG00000143545, RAB13, RAB13, member RAS oncogene family, [Score=155, Expect=4e-42]; ENSG00000285641, AL358472.6, novel protein, [Score=155, Expect=4e-42]; ENSG00000111737, RAB35, RAB35, member RAS oncogene family, [Score=153, Expect=1e-41]} {Mouse: ENSMUSG00000020149, Rab1a, RAB1A, member RAS oncogene family, [Score=162, Expect=6e-45]; ENSMUSG00000024870, Rab1b, RAB1B, member RAS oncogene family, [Score=160, Expect=3e-44]} {Dmel: FBgn0285937, Rab1, [Score=163, Expect=3e-45]} {Celegans: WBGene00004266, rab-1, RAB family, [Score=160, Expect=2e-44]} {Smed: dd_Smed_v6_488_0_1, dd_Smed_v6_488_0_1, [Score=160, Expect=1e-44]} {RNA1509_27183, RNA1509_39657, RNA1509_41590, RNA1509_44043} {RNA1310_2946, RNA1509_27183, RNA1509_39657, RNA1509_41590, RNA1509_44043} {RNA1509_27183, RNA1509_39657, RNA1509_41590, RNA1509_44043, RNA815_567} Mlig455_069418 {REF} {Length: 6098} {Pfam: Ras family [PF00071.24, score=148.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=108.4]; ADP-ribosylation factor family [PF00025.23, score=63.8]; Caspase recruitment domain [PF00619.23, score=36.9]; 50S ribosome-binding GTPase [PF01926.25, score=27.8]; Gtr1/RagA G protein conserved region [PF04670.14, score=21.8]; Elongation factor Tu GTP binding domain [PF00009.29, score=21.2]; Bacterial TniB protein [PF05621.13, score=18.7]} {Human: ENSG00000174903, RAB1B, RAB1B, member RAS oncogene family, [Score=155, Expect=2e-42]; ENSG00000138069, RAB1A, RAB1A, member RAS oncogene family, [Score=155, Expect=1e-42]} {Mouse: ENSMUSG00000020149, Rab1a, RAB1A, member RAS oncogene family, [Score=156, Expect=6e-43]; ENSMUSG00000024870, Rab1b, RAB1B, member RAS oncogene family, [Score=154, Expect=2e-42]} {Dmel: FBgn0285937, Rab1, [Score=154, Expect=2e-42]} {Celegans: WBGene00004266, rab-1, RAB family, [Score=149, Expect=6e-41]} {Smed: dd_Smed_v6_488_0_1, dd_Smed_v6_488_0_1, [Score=148, Expect=1e-40]} {RNA1509_44043} {RNA1310_6196} {RNA815_567} |
| 4. | MligTC455_02509 | 521 | 10.86 | Mlig455_065661 | Neo: - Age: Up-Down-Down Region-enriched R3: 1.610/0.00107 |
0.954 | - | - | - | 0.954 | - | - | Mlig455_065661 {REF} {Length: 3283} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=35.6]; Ubiquitin family [PF00240.25, score=19.5]} {RNA1509_11818} {RNA1310_25951.1, RNA1509_11818} {RNA1509_11818, RNA815_12500.1} | |
| 5. | MligTC455_14735 | 296 | 6.16 | Mlig455_039449 | Neo: - Age: - |
0.952 | - | - | - | - | 0.952 | - | Mlig455_039449 {REF} {Length: 354} {NoTransDecoderORF} {RNA1310_106071} {RNA815_53172} |