M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_51544

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_51544 524 10.92 Mlig455_037613

Neo: -

Age: Down-Up-Down

Region-enriched R4: 1.929/0.00029

 Mlig455_037613 {REF} {Length: 1573} {RNA1509_13360} {RNA1310_26287} {RNA815_1224.1}

Cumulative graph for MligTC455_51544

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.702 3.845 0.31276 0.96186
RegionR2 -0.529 3.845 0.32473 0.71692
RegionR3 0.013 3.845 0.96727 1.00000
RegionR4 1.929 3.845 0.00001 0.00029
RegionR5 0.146 3.845 0.72253 1.00000
RegionR6 0.324 3.845 0.44689 1.00000
RegionR7 -0.081 3.845 0.89889 1.00000
RegionR8 -0.099 3.845 0.90095 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.709 3.845 0.76382 1.00000
RegenerationR2 0.098 3.845 0.77268 0.98097
RegenerationR3 -0.15 3.845 0.69948 0.94731
RegenerationR4 -0.456 3.845 0.21548 0.66252
RegenerationR5 0.297 3.845 0.40238 0.80048
RegenerationR6 -0.623 3.845 0.12822 0.43995
RegenerationBL -0.732 3.845 0.20732 0.54955
RegenerationTP 0.589 3.845 0.28243 0.73005


Genes with expression patterns similar to MligTC455_51544

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_51544 524 10.92 Mlig455_037613

Neo: -

Age: Down-Up-Down

Region-enriched R4: 1.929/0.00029

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_037613 {REF} {Length: 1573} {RNA1509_13360} {RNA1310_26287} {RNA815_1224.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA