M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_51594

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_51594 104 2.17 Mlig455_019623

Neo: -

Age: Up-Up-Up, logFC(26M/2M)=1.124

 LMO7 Mlig455_019623 {REF} {Length: 3676} {Pfam: Calponin homology (CH) domain [PF00307.33, score=44.6]; LIM domain [PF00412.24, score=31.6]; CAMSAP CH domain [PF11971.10, score=28.8]} {Human: ENSG00000136153, LMO7, LIM domain 7, [RH, Score=93.6, Expect=1e-18]; ENSG00000064042, LIMCH1, LIM and calponin homology domains 1, [RH, Score=91.3, Expect=4e-18]} {Mouse: ENSMUSG00000033060, Lmo7, LIM domain only 7, [RH, Score=93.6, Expect=8e-19]; ENSMUSG00000037736, Limch1, LIM and calponin homology domains 1, [RH, Score=92.8, Expect=1e-18]} {Dmel: FBgn0263346, CG43427, [RH, Score=130, Expect=2e-30]} {Celegans: WBGene00017904, lim-8, LIM domain family, [Score=108, Expect=5e-24]} {Smed: dd_Smed_v6_10011_0_1, dd_Smed_v6_10011_0_1, [RH, Score=101, Expect=2e-21]} {RNA1509_49428} {RNA1310_1073, RNA1509_49428} {RNA1509_49428, RNA815_7834.1}

Cumulative graph for MligTC455_51594

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.518 2.027 0.65583 1.00000
RegionR2 1.886 2.027 0.08104 0.34890
RegionR3 -0.381 2.027 0.94476 1.00000
RegionR4 0.982 2.027 0.40460 0.73147
RegionR5 -1.003 2.027 0.98959 1.00000
RegionR6 -0.663 2.027 0.97381 1.00000
RegionR7 1.176 2.027 0.40752 1.00000
RegionR8 0.521 2.027 0.74237 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.723 2.027 0.99994 1.00000
RegenerationR2 0.212 2.027 0.68185 0.94953
RegenerationR3 1.75 2.027 0.03804 0.34402
RegenerationR4 1.129 2.027 0.16340 0.59721
RegenerationR5 2.599 2.027 0.00054 0.03847
RegenerationR6 1.857 2.027 0.05073 0.28178
RegenerationBL 1.753 2.027 0.08844 0.34843
RegenerationTP 1.109 2.027 0.34231 0.78499


Genes with expression patterns similar to MligTC455_51594

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_51594 104 2.17 Mlig455_019623

Neo: -

Age: Up-Up-Up, logFC(26M/2M)=1.124

 LMO7 5 - 1.000 1.000 1.000 1.000 1.000 Mlig455_019623 {REF} {Length: 3676} {Pfam: Calponin homology (CH) domain [PF00307.33, score=44.6]; LIM domain [PF00412.24, score=31.6]; CAMSAP CH domain [PF11971.10, score=28.8]} {Human: ENSG00000136153, LMO7, LIM domain 7, [RH, Score=93.6, Expect=1e-18]; ENSG00000064042, LIMCH1, LIM and calponin homology domains 1, [RH, Score=91.3, Expect=4e-18]} {Mouse: ENSMUSG00000033060, Lmo7, LIM domain only 7, [RH, Score=93.6, Expect=8e-19]; ENSMUSG00000037736, Limch1, LIM and calponin homology domains 1, [RH, Score=92.8, Expect=1e-18]} {Dmel: FBgn0263346, CG43427, [RH, Score=130, Expect=2e-30]} {Celegans: WBGene00017904, lim-8, LIM domain family, [Score=108, Expect=5e-24]} {Smed: dd_Smed_v6_10011_0_1, dd_Smed_v6_10011_0_1, [RH, Score=101, Expect=2e-21]} {RNA1509_49428} {RNA1310_1073, RNA1509_49428} {RNA1509_49428, RNA815_7834.1}
2. MligTC455_43981 82 1.71 Mlig455_043913

Neo: -

Age: logFC(26M/2M)=-0.628

 2.581 - 0.951 0.815 - 0.815 - Mlig455_043913 {REF} {Length: 3235} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=165.2]} {Dmel: FBgn0039679, ppk19, pickpocket 19, [Score=53.9, Expect=3e-07]} {Celegans: WBGene00009073, delm-1, DEgenerin Linked to Mechanosensation, [Score=56.2, Expect=5e-08]} {Smed: dd_Smed_v6_16557_0_1, dd_Smed_v6_16557_0_1, [Score=72.0, Expect=3e-13]} {RNA1310_43117} {RNA815_28951}
3. MligTC455_53460 29 0.61 Mlig455_007069

Neo: -

Age: Up-Down-Down

 PLCE1 1.768 - - 0.961 - 0.807 - Mlig455_007069 {REF} {Length: 11082} {Pfam: Phosphatidylinositol-specific phospholipase C, X domain [PF00388.21, score=203.6]; Phosphatidylinositol-specific phospholipase C, Y domain [PF00387.21, score=105.3]; RasGEF domain [PF00617.21, score=49.4]; FERM central domain [PF00373.20, score=30.2]; Phosphoinositide-specific phospholipase C, efhand-like [PF09279.13, score=27.0]; C2 domain [PF00168.32, score=24.1]; Ankyrin repeats (many copies) [PF13637.8, score=20.6]} {Human: ENSG00000138193, PLCE1, phospholipase C epsilon 1, [Score=504, Expect=1e-143]} {Mouse: ENSMUSG00000024998, Plce1, phospholipase C, epsilon 1, [Score=497, Expect=1e-141]} {Dmel: FBgn0004611, Plc21C, Phospholipase C at 21C, [Score=162, Expect=3e-39]} {Celegans: WBGene00001177, egl-8, 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta egl-8, [Score=260, Expect=1e-69]} {Smed: dd_Smed_v6_9716_1_1, dd_Smed_v6_9716_1_1, [Score=561, Expect=4e-162]} {RNA1310_38856} {RNA815_52816}
4. MligTC455_37986 195 4.07 Mlig455_050882

Neo: -

Age: -

 TTC29 1.73 - - 0.956 0.774 - - Mlig455_050882 {REF} {Length: 1992} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13424.8, score=49.0]; Tetratricopeptide repeat [PF00515.30, score=36.1]; Tetratricopeptide repeat [PF13176.8, score=31.2]; Tetratricopeptide repeat [PF13432.8, score=22.1]; Tetratricopeptide repeat [PF07719.19, score=18.9]; Tetratricopeptide repeat [PF13181.8, score=18.7]} {Human: ENSG00000137473, TTC29, tetratricopeptide repeat domain 29, [Score=207, Expect=8e-61]} {Mouse: ENSMUSG00000037101, Ttc29, tetratricopeptide repeat domain 29, [Score=213, Expect=3e-63]} {Smed: dd_Smed_v6_9158_0_2, dd_Smed_v6_9158_0_2, [Score=289, Expect=2e-92]} {RNA1509_38793} {RNA1310_12639.1} {RNA815_4532}
5. MligTC455_26411 55 1.14 Mlig455_024911

Neo: -

Age: -

 0.99 - - 0.990 - - - Mlig455_024911 {REF} {Length: 2411} {Pfam: SH3 domain [PF00018.30, score=28.9]; Variant SH3 domain [PF14604.8, score=22.2]; Variant SH3 domain [PF07653.19, score=22.1]} {Smed: dd_Smed_v6_8729_0_1, dd_Smed_v6_8729_0_1, [RH, Score=60.1, Expect=5e-10]} {RNA1310_32104} {RNA815_32970}
6. MligTC455_15439 10 0.22 Mlig455_030117

Neo: -

Age: -

 0.986 - - 0.986 - - - Mlig455_030117 {REF} {Length: 523} {NoTransDecoderORF}
7. MligTC455_49969 23 0.48 Mlig455_006042

Neo: -

Age: -

 0.983 - - 0.983 - - - Mlig455_006042 {REF} {Length: 2204} {Pfam: F5/8 type C domain [PF00754.27, score=21.8]} {RNA1509_25922} {RNA1310_32867} {RNA815_55792}
8. MligTC455_43944 127 2.65 Mlig455_034908, Mlig455_057032

Neo: -

Age: -

 ASZ1 0.98 - - 0.980 - - -

Mlig455_034908 {REF} {Length: 2109} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=104.1]; Ankyrin repeat [PF00023.32, score=66.8]; Ankyrin repeats (many copies) [PF13637.8, score=66.5]; Ankyrin repeat [PF13606.8, score=59.8]; Ankyrin repeats (many copies) [PF13857.8, score=50.7]} {Human: ENSG00000154438, ASZ1, ankyrin repeat, SAM and basic leucine zipper domain containing 1, [Score=74.3, Expect=6e-14]; ENSG00000151150, ANK3, ankyrin 3, [Score=73.6, Expect=2e-13]; ENSG00000029534, ANK1, ankyrin 1, [Score=72.0, Expect=6e-13]; ENSG00000145362, ANK2, ankyrin 2, [Score=70.9, Expect=2e-12]} {Mouse: ENSMUSG00000010796, Asz1, ankyrin repeat, SAM and basic leucine zipper domain containing 1, [Score=78.6, Expect=2e-15]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=82.0, Expect=2e-16]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=64.3, Expect=6e-11]} {Smed: dd_Smed_v6_10835_0_1, dd_Smed_v6_10835_0_1, [Score=72.8, Expect=8e-14]} {RNA1509_40422} {RNA1310_12259.3} {RNA815_31613}

Mlig455_057032 {REF} {Length: 2156} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=80.0]; Ankyrin repeats (many copies) [PF13637.8, score=75.0]; Ankyrin repeat [PF00023.32, score=70.0]; Ankyrin repeat [PF13606.8, score=60.6]; Ankyrin repeats (many copies) [PF13857.8, score=44.1]} {Human: ENSG00000154438, ASZ1, ankyrin repeat, SAM and basic leucine zipper domain containing 1, [Score=69.7, Expect=8e-13]; ENSG00000145362, ANK2, ankyrin 2, [Score=68.9, Expect=3e-12]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=69.7, Expect=8e-13]; ENSMUSG00000010796, Asz1, ankyrin repeat, SAM and basic leucine zipper domain containing 1, [Score=68.6, Expect=1e-12]} {Dmel: FBgn0031473, CG3104, [Score=67.0, Expect=2e-12]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=62.4, Expect=1e-10]} {Smed: dd_Smed_v6_10835_0_1, dd_Smed_v6_10835_0_1, [Score=68.6, Expect=7e-13]} {RNA1509_25472, RNA1509_31927, RNA1509_40422, RNA1509_45631} {RNA1310_12259.1, RNA1509_25472, RNA1509_31927, RNA1509_40422, RNA1509_45631} {RNA1509_25472, RNA1509_31927, RNA1509_40422, RNA1509_45631, RNA815_19402}
9. MligTC455_25245 34 0.7 Mlig455_006162, Mlig455_029139, Mlig455_054138, Mlig455_065758, Mlig455_068467, Mlig455_071050

Neo: -

Age: -

 0.978 - - 0.978 - - -

Mlig455_006162 {REF} {Length: 1019} {Pfam: Repeat of unknown function (DUF1502) [PF07397.13, score=23.1]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=18.5]} {Dmel: FBgn0032638, SPH93, Serine protease homolog 93, [Score=60.8, Expect=6e-10]} {RNA1509_21624} {RNA1310_7883} {RNA815_57704}

Mlig455_029139 {REF} {Length: 1958} {Pfam: Domain of unknown function (DUF4834) [PF16118.7, score=25.2]; Repeat of unknown function (DUF1502) [PF07397.13, score=19.7]; Subunit CCDC53 of WASH complex [PF10152.11, score=19.2]} {Dmel: FBgn0032638, SPH93, Serine protease homolog 93, [Score=82.4, Expect=3e-16]} {RNA1509_21624} {RNA1310_7883} {RNA815_57704}

Mlig455_054138 {REF} {Length: 1019} {Pfam: Repeat of unknown function (DUF1502) [PF07397.13, score=22.9]} {Dmel: FBgn0032638, SPH93, Serine protease homolog 93, [Score=80.1, Expect=3e-16]} {RNA1509_21624} {RNA1310_7883} {RNA815_57704}

Mlig455_065758 {REF} {Length: 977} {Dmel: FBgn0032638, SPH93, Serine protease homolog 93, [Score=73.9, Expect=3e-14]} {RNA1509_21624} {RNA1310_7883} {RNA815_57704}

Mlig455_068467 {REF} {Length: 1103} {Pfam: Repeat of unknown function (DUF1502) [PF07397.13, score=29.2]} {Dmel: FBgn0032638, SPH93, Serine protease homolog 93, [Score=86.7, Expect=2e-18]} {RNA1509_21624} {RNA1310_7883} {RNA815_57704}

Mlig455_071050 {REF} {Length: 668} {TRANSSPLICED} {Pfam: Transcription factor IIA, alpha/beta subunit [PF03153.15, score=32.5]} {RNA1509_21624} {RNA1310_7883} {RNA815_36144}
10. MligTC455_32392 63 1.31 Mlig455_048146

Neo: -

Age: -

 SDCBP2 0.977 - - 0.977 - - - Mlig455_048146 {REF} {Length: 895} {Pfam: PDZ domain [PF00595.26, score=47.3]; PDZ domain [PF17820.3, score=35.5]; PDZ domain [PF13180.8, score=31.4]} {Human: ENSG00000125775, SDCBP2, syndecan binding protein 2, [Score=60.1, Expect=1e-10]} {Mouse: ENSMUSG00000027456, Sdcbp2, syndecan binding protein (syntenin) 2, [Score=61.2, Expect=3e-11]} {Dmel: FBgn0263289, scrib, scribbled, [Score=46.6, Expect=4e-06]} {Celegans: WBGene00016678, C45G9.7, [Score=44.3, Expect=4e-06]} {Smed: dd_Smed_v6_11951_0_1, dd_Smed_v6_11951_0_1, [Score=90.5, Expect=1e-21]} {RNA1310_28491} {RNA815_52955}
11. MligTC455_31272 74 1.54 Mlig455_017539

Neo: -

Age: Down-Up-Down

 JMJD6 0.976 - - 0.976 - - - Mlig455_017539 {REF} {Length: 3500} {Pfam: Cupin-like domain [PF13621.8, score=83.9]; JmjC domain, hydroxylase [PF02373.24, score=41.2]; Cupin superfamily protein [PF08007.14, score=22.9]} {Human: ENSG00000070495, JMJD6, jumonji domain containing 6, arginine demethylase and lysine hydroxylase, [Score=81.3, Expect=6e-16]} {Mouse: ENSMUSG00000056962, Jmjd6, jumonji domain containing 6, [Score=78.6, Expect=3e-15]} {Dmel: FBgn0038948, PSR, phosphatidylserine receptor, [Score=77.4, Expect=5e-15]} {Celegans: WBGene00004205, psr-1, Bifunctional arginine demethylase and lysyl-hydroxylase psr-1, [Score=88.2, Expect=8e-19]} {Smed: dd_Smed_v6_12267_0_1, dd_Smed_v6_12267_0_1, [RH, Score=326, Expect=2e-107]} {RNA1509_51449} {RNA1310_17984} {RNA815_15470}
12. MligTC455_54075 61 1.28 Mlig455_031970

Neo: -

Age: Down-Up-Up

 0.974 - - 0.974 - - - Mlig455_031970 {REF} {Length: 650} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_46967}
13. MligTC455_21239 12 0.24 Mlig455_023140

Neo: -

Age: logFC(26M/2M)=1.338

 0.972 - - 0.972 - - - Mlig455_023140 {REF} {Length: 1659} {RNA1509_26596} {RNA1310_14600} {RNA815_8172}
14. MligTC455_21980 26 0.55 Mlig455_071130

Neo: -

Age: -

 0.969 - - 0.969 - - - Mlig455_071130 {REF} {Length: 825} {RNA1310_35056} {RNA815_23681}
15. MligTC455_09082 24 0.5 Mlig455_020724

Neo: -

Age: Down-Up-Down

 FBXL7 0.966 - - 0.966 - - - Mlig455_020724 {REF} {Length: 2713} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=56.5]; F-box domain [PF00646.35, score=39.2]} {Human: ENSG00000183580, FBXL7, F-box and leucine rich repeat protein 7, [Score=62.0, Expect=9e-11]} {Mouse: ENSMUSG00000043556, Fbxl7, F-box and leucine-rich repeat protein 7, [Score=61.6, Expect=1e-10]} {RNA1509_24740} {RNA1310_14764} {RNA815_32073}
16. MligTC455_29317 89 1.85 Mlig455_062533

Neo: -

Age: logFC(26M/2M)=0.866

 SLC18A3 0.966 - - 0.966 - - - Mlig455_062533 {REF} {Length: 3319} {Pfam: Major Facilitator Superfamily [PF07690.18, score=140.0]; LacY proton/sugar symporter [PF01306.21, score=22.0]} {Human: ENSG00000187714, SLC18A3, solute carrier family 18 member A3, [RH, Score=457, Expect=1e-155]} {Mouse: ENSMUSG00000100241, Slc18a3, solute carrier family 18 (vesicular monoamine), member 3, [RH, Score=462, Expect=8e-158]} {Dmel: FBgn0270928, VAChT, Vesicular acetylcholine transporter, [RH, Score=512, Expect=6e-177]} {Celegans: WBGene00006756, unc-17, Vesicular acetylcholine transporter unc-17, [RH, Score=474, Expect=6e-163]} {Smed: dd_Smed_v6_11630_0_1, dd_Smed_v6_11630_0_1, [RH, Score=535, Expect=0.0]} {RNA1509_22907} {RNA1310_5498.1, RNA1509_22907} {RNA1509_22907, RNA815_3951}
17. MligTC455_07029 51 1.07 Mlig455_030754

Neo: -

Age: Up-Down-Down

 KIF1A 0.964 - - 0.964 - - - Mlig455_030754 {REF} {Length: 6754} {Pfam: Kinesin motor domain [PF00225.25, score=361.6]; Kinesin-associated [PF16183.7, score=198.6]; Kinesin protein [PF12473.10, score=104.3]; Microtubule binding [PF16796.7, score=63.6]; PH domain [PF00169.31, score=42.1]; Kinesin protein 1B [PF12423.10, score=37.6]; FHA domain [PF00498.28, score=32.6]; Inner membrane component of T3SS, cytoplasmic domain [PF16697.7, score=26.1]} {Human: ENSG00000130294, KIF1A, kinesin family member 1A, [Score=1405, Expect=0.0]} {Mouse: ENSMUSG00000014602, Kif1a, kinesin family member 1A, [Score=1404, Expect=0.0]} {Dmel: FBgn0267002, unc-104, uncoordinated-104, [Score=1415, Expect=0.0]} {Celegans: WBGene00006831, unc-104, Kinesin-like protein unc-104, [RH, Score=1292, Expect=0.0]} {Smed: dd_Smed_v6_7108_0_2, dd_Smed_v6_7108_0_2, [Score=1552, Expect=0.0]} {RNA1509_24107} {RNA1310_2896} {RNA815_13100}
18. MligTC455_51609 26 0.55 Mlig455_059418

Neo: -

Age: -

 FAAH 0.964 - - 0.964 - - - Mlig455_059418 {REF} {Length: 2674} {Pfam: Amidase [PF01425.23, score=256.5]} {Human: ENSG00000117480, FAAH, fatty acid amide hydrolase, [Score=243, Expect=7e-72]} {Mouse: ENSMUSG00000034171, Faah, fatty acid amide hydrolase, [Score=252, Expect=2e-75]} {Dmel: FBgn0037547, CG7910, [Score=103, Expect=4e-23]} {Celegans: WBGene00019068, faah-3, Fatty Acid Amide Hydrolase homolog, [Score=266, Expect=3e-81]} {Smed: dd_Smed_v6_3298_0_1, dd_Smed_v6_3298_0_1, [Score=358, Expect=3e-116]} {RNA1310_26916} {RNA815_54676}
19. MligTC455_22132 244 5.09 Mlig455_014847

Neo: -

Age: Down-Up-Up

 GNAL 0.961 - - 0.961 - - - Mlig455_014847 {REF} {Length: 2226} {Pfam: G-protein alpha subunit [PF00503.22, score=147.2]; ADP-ribosylation factor family [PF00025.23, score=30.4]} {Human: ENSG00000141404, GNAL, G protein subunit alpha L, [Score=270, Expect=2e-88]; ENSG00000087460, GNAS, GNAS complex locus, [Score=268, Expect=2e-87]} {Mouse: ENSMUSG00000024524, Gnal, guanine nucleotide binding protein, alpha stimulating, olfactory type, [Score=271, Expect=6e-89]; ENSMUSG00000027523, Gnas, GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus, [Score=266, Expect=5e-87]} {Dmel: FBgn0001123, Galphas, G protein alpha s subunit, [Score=263, Expect=8e-86]} {Celegans: WBGene00001745, gsa-1, G protein, Subunit Alpha, [Score=236, Expect=1e-75]} {Smed: dd_Smed_v6_9665_0_1, dd_Smed_v6_9665_0_1, [Score=292, Expect=1e-97]} {RNA1509_8369} {RNA1310_16496.1} {RNA815_6288}
20. MligTC455_16246 45 0.95 Mlig455_036572

Neo: -

Age: Down-Up-Down

 0.96 - - 0.960 - - - Mlig455_036572 {REF} {Length: 810} {RNA1310_54790} {RNA815_37149}
21. MligTC455_42506 551 11.49 Mlig455_044711

Neo: -

Age: Up-Down-Down

 SPEN 0.96 - - - - 0.960 - Mlig455_044711 {REF} {Length: 13223} {Pfam: SPOC domain [PF07744.15, score=107.0]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=84.3]; Occluded RNA-recognition motif [PF16842.7, score=26.0]} {Human: ENSG00000065526, SPEN, spen family transcriptional repressor, [RH, Score=224, Expect=2e-57]} {Mouse: ENSMUSG00000040761, Spen, spen family transcription repressor, [RH, Score=225, Expect=6e-58]} {Dmel: FBgn0016977, spen, split ends, [RH, Score=218, Expect=6e-56]} {Celegans: WBGene00008549, din-1, Daf-12-interacting protein 1, [RH, Score=94.0, Expect=2e-18]} {Smed: dd_Smed_v6_6458_0_1, dd_Smed_v6_6458_0_1, [RH, Score=190, Expect=1e-47]} {RNA1509_1038, RNA1509_35463} {RNA1310_36.2, RNA1509_35463} {RNA1509_35463, RNA815_326}
22. MligTC455_47927 43 0.9 Mlig455_029720

Neo: -

Age: -

 0.96 - - 0.960 - - - Mlig455_029720 {REF} {Length: 2459} {RNA1509_35671} {RNA1310_75812} {RNA815_33002}
23. MligTC455_52814 47 0.97 Mlig455_047356, Mlig455_047365

Neo: -

Age: -

 CNTN2 0.959 - - 0.959 - - -

Mlig455_047356 {REF} {Length: 2537} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=57.8]; Immunoglobulin domain [PF13927.8, score=52.6]; Immunoglobulin domain [PF13895.8, score=40.4]; Immunoglobulin domain [PF00047.27, score=40.3]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=25.9]} {Human: ENSG00000184144, CNTN2, contactin 2, [Score=58.5, Expect=3e-08]} {Mouse: ENSMUSG00000053024, Cntn2, contactin 2, [Score=56.6, Expect=8e-08]; ENSMUSG00000061751, Kalrn, kalirin, RhoGEF kinase, [Score=55.1, Expect=2e-07]; ENSMUSG00000020674, Pxdn, peroxidasin, [Score=54.7, Expect=3e-07]} {Dmel: FBgn0264975, Nrg, Neuroglian, [Score=58.2, Expect=2e-08]} {Smed: dd_Smed_v6_15129_0_1, dd_Smed_v6_15129_0_1, [RH, Score=99.8, Expect=2e-22]} {RNA1509_60115} {RNA1310_31768} {RNA815_18728}

Mlig455_047365 {REF} {Length: 3489} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=57.9]; Immunoglobulin domain [PF13927.8, score=52.8]; Immunoglobulin domain [PF13895.8, score=40.5]; Immunoglobulin domain [PF00047.27, score=40.3]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=26.4]} {Human: ENSG00000184144, CNTN2, contactin 2, [Score=57.4, Expect=5e-08]} {Mouse: ENSMUSG00000053024, Cntn2, contactin 2, [Score=55.5, Expect=1e-07]; ENSMUSG00000020674, Pxdn, peroxidasin, [Score=53.9, Expect=5e-07]; ENSMUSG00000061751, Kalrn, kalirin, RhoGEF kinase, [Score=53.5, Expect=6e-07]; ENSMUSG00000055022, Cntn1, contactin 1, [Score=52.8, Expect=1e-06]; ENSMUSG00000030075, Cntn3, contactin 3, [Score=52.8, Expect=1e-06]} {Dmel: FBgn0264975, Nrg, Neuroglian, [Score=55.5, Expect=1e-07]} {Smed: dd_Smed_v6_15129_0_1, dd_Smed_v6_15129_0_1, [RH, Score=99.8, Expect=1e-22]} {RNA1509_60115} {RNA1310_31768} {RNA815_19521}
24. MligTC455_09085 27 0.57 Mlig455_020791

Neo: -

Age: -

 FBXL7 0.958 - - 0.958 - - - Mlig455_020791 {REF} {Length: 1918} {Pfam: F-box-like [PF12937.9, score=52.5]; F-box domain [PF00646.35, score=39.7]} {Human: ENSG00000183580, FBXL7, F-box and leucine rich repeat protein 7, [Score=63.2, Expect=2e-10]} {Mouse: ENSMUSG00000043556, Fbxl7, F-box and leucine-rich repeat protein 7, [Score=62.4, Expect=3e-10]; ENSMUSG00000020883, Fbxl20, F-box and leucine-rich repeat protein 20, [Score=60.1, Expect=1e-09]} {RNA1509_13719} {RNA1310_4290.1} {RNA815_32073}
25. MligTC455_38966 79 1.65 Mlig455_032200, Mlig455_054191

Neo: -

Age: Up-Down-Down

 UTRN 0.958 - - 0.958 - - -

Mlig455_032200 {REF} {Length: 2203} {Human: ENSG00000152818, UTRN, utrophin, [Score=65.9, Expect=8e-12]} {Mouse: ENSMUSG00000019820, Utrn, utrophin, [Score=62.8, Expect=6e-11]} {Dmel: FBgn0260003, Dys, Dystrophin, [Score=58.2, Expect=1e-09]} {Smed: dd_Smed_v6_5325_0_1, dd_Smed_v6_5325_0_1, [Score=91.3, Expect=4e-21]} {RNA1509_38827} {RNA1310_32833} {RNA815_17087}

Mlig455_054191 {REF} {Length: 7646} {Pfam: EF-hand [PF09069.13, score=126.3]; EF hand [PF09068.13, score=102.4]; Zinc finger, ZZ type [PF00569.19, score=36.5]; WW domain [PF00397.28, score=19.9]} {Human: ENSG00000152818, UTRN, utrophin, [RH, Score=493, Expect=2e-140]; ENSG00000198947, DMD, dystrophin, [RH, Score=491, Expect=8e-145]} {Mouse: ENSMUSG00000045103, Dmd, dystrophin, muscular dystrophy, [RH, Score=488, Expect=4e-139]; ENSMUSG00000019820, Utrn, utrophin, [RH, Score=485, Expect=5e-138]} {Dmel: FBgn0260003, Dys, Dystrophin, [RH, Score=520, Expect=1e-155]} {Celegans: WBGene00001131, dys-1, Dystrophin-1, [RH, Score=344, Expect=1e-94]} {Smed: dd_Smed_v6_5325_0_3, dd_Smed_v6_5325_0_3, [RH, Score=302, Expect=7e-82]} {RNA1509_38827} {RNA1310_24533} {RNA815_12379}
26. MligTC455_22843 35 0.73 Mlig455_047583, Mlig455_069702

Neo: -

Age: Up-Down-Down

 0.957 - - 0.957 - - -

Mlig455_047583 {REF} {Length: 1867} {Pfam: Lectin C-type domain [PF00059.23, score=31.2]} {RNA1310_65565} {RNA815_34849}

Mlig455_069702 {REF} {Length: 2065} {Pfam: Lectin C-type domain [PF00059.23, score=24.8]} {RNA1310_70487} {RNA815_34849}
27. MligTC455_06988 58 1.21 Mlig455_030852

Neo: -

Age: -

 0.955 - - 0.955 - - - Mlig455_030852 {REF} {Length: 583} {NoTransDecoderORF} {RNA1509_59553} {RNA1310_127391} {RNA815_48322}
28. MligTC455_13506 189 3.95 Mlig455_027975

Neo: -

Age: -

 0.954 - - 0.954 - - - Mlig455_027975 {REF} {Length: 368} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_37868} {RNA815_46374}
29. MligTC455_53814 76 1.59 Mlig455_013605

Neo: -

Age: -

 0.954 - - 0.954 - - - Mlig455_013605 {REF} {Length: 467} {NoTransDecoderORF} {RNA1509_22316} {RNA1310_77656}
30. MligTC455_11315 154 3.2 Mlig455_027636, Mlig455_027650, Mlig455_036368, Mlig455_069999

Neo: -

Age: -

 0.95 - - 0.950 - - -

Mlig455_027636 {REF} {Length: 1407} {RNA1509_40399} {RNA1310_60387} {RNA815_44351}

Mlig455_027650 {REF} {Length: 1408} {RNA1509_40399} {RNA1310_60387} {RNA815_44351}

Mlig455_036368 {REF} {Length: 592} {RNA1310_60387} {RNA815_44351}

Mlig455_069999 {REF} {Length: 998} {RNA1310_60387} {RNA815_44351}
31. MligTC455_53546 130 2.72 Mlig455_013326, Mlig455_013334

Neo: -

Age: -

Region-enriched R2: 6.753/0.01892

 MMP9 0.95 - - 0.950 - - -

Mlig455_013326 {REF} {Length: 1449} {Pfam: Fibronectin type II domain [PF00040.21, score=92.5]} {Human: ENSG00000100985, MMP9, matrix metallopeptidase 9, [RH, Score=87.8, Expect=3e-18]} {Mouse: ENSMUSG00000017737, Mmp9, matrix metallopeptidase 9, [RH, Score=82.4, Expect=1e-16]; ENSMUSG00000031740, Mmp2, matrix metallopeptidase 2, [RH, Score=78.6, Expect=2e-15]} {Smed: dd_Smed_v6_14558_0_1, dd_Smed_v6_14558_0_1, [RH, Score=138, Expect=3e-38]} {RNA1310_38631} {RNA815_51136}

Mlig455_013334 {REF} {Length: 1398} {Pfam: Fibronectin type II domain [PF00040.21, score=92.1]} {Human: ENSG00000100985, MMP9, matrix metallopeptidase 9, [RH, Score=89.4, Expect=1e-18]} {Mouse: ENSMUSG00000017737, Mmp9, matrix metallopeptidase 9, [RH, Score=84.0, Expect=4e-17]} {Smed: dd_Smed_v6_12601_0_1, dd_Smed_v6_12601_0_1, [RH, Score=140, Expect=2e-38]} {RNA1310_38631} {RNA815_51136}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA