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Results for MligTC455_51682

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_51682 920 19.17 Mlig455_031522

Neo: -

Age: -

Region-enriched R4: 1.366/0.00580
Region-enriched R5: 1.136/0.00342

 YBX3 Mlig455_031522 {REF} {Length: 4909} {Pfam: 'Cold-shock' DNA-binding domain [PF00313.24, score=92.6]} {Human: ENSG00000060138, YBX3, Y-box binding protein 3, [RH, Score=162, Expect=2e-47]; ENSG00000065978, YBX1, Y-box binding protein 1, [RH, Score=157, Expect=1e-45]} {Mouse: ENSMUSG00000030189, Ybx3, Y box protein 3, [RH, Score=162, Expect=5e-48]; ENSMUSG00000028639, Ybx1, Y box protein 1, [RH, Score=157, Expect=7e-46]} {Dmel: FBgn0022959, yps, ypsilon schachtel, [RH, Score=155, Expect=1e-44]} {Celegans: WBGene00000472, cey-1, C. Elegans Y-box, [RH, Score=147, Expect=3e-43]} {Smed: dd_Smed_v6_25570_0_1, dd_Smed_v6_25570_0_1, [RH, Score=170, Expect=2e-50]} {RNA1509_13915, RNA1509_47297} {RNA1310_19119, RNA1509_13915, RNA1509_47297} {RNA1509_13915, RNA1509_47297, RNA815_19171.1}

Cumulative graph for MligTC455_51682

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.563 4.58 0.21980 0.86322
RegionR2 -0.475 4.58 0.30537 0.69603
RegionR3 0.271 4.58 0.45763 0.96759
RegionR4 1.366 4.58 0.00048 0.00580
RegionR5 1.136 4.58 0.00025 0.00342
RegionR6 0.45 4.58 0.22226 0.80244
RegionR7 0 4.58 0.99626 1.00000
RegionR8 -1.184 4.58 0.13470 0.67156

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.652 4.58 0.70459 1.00000
RegenerationR2 0.864 4.58 0.00612 0.12519
RegenerationR3 0.132 4.58 0.70213 0.94821
RegenerationR4 -0.188 4.58 0.58127 0.90561
RegenerationR5 -0.077 4.58 0.79783 0.98810
RegenerationR6 0.239 4.58 0.48543 0.79540
RegenerationBL 0.807 4.58 0.07055 0.30928
RegenerationTP 0.39 4.58 0.50491 0.90349


Genes with expression patterns similar to MligTC455_51682

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_51682 920 19.17 Mlig455_031522

Neo: -

Age: -

Region-enriched R4: 1.366/0.00580
Region-enriched R5: 1.136/0.00342

 YBX3 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_031522 {REF} {Length: 4909} {Pfam: 'Cold-shock' DNA-binding domain [PF00313.24, score=92.6]} {Human: ENSG00000060138, YBX3, Y-box binding protein 3, [RH, Score=162, Expect=2e-47]; ENSG00000065978, YBX1, Y-box binding protein 1, [RH, Score=157, Expect=1e-45]} {Mouse: ENSMUSG00000030189, Ybx3, Y box protein 3, [RH, Score=162, Expect=5e-48]; ENSMUSG00000028639, Ybx1, Y box protein 1, [RH, Score=157, Expect=7e-46]} {Dmel: FBgn0022959, yps, ypsilon schachtel, [RH, Score=155, Expect=1e-44]} {Celegans: WBGene00000472, cey-1, C. Elegans Y-box, [RH, Score=147, Expect=3e-43]} {Smed: dd_Smed_v6_25570_0_1, dd_Smed_v6_25570_0_1, [RH, Score=170, Expect=2e-50]} {RNA1509_13915, RNA1509_47297} {RNA1310_19119, RNA1509_13915, RNA1509_47297} {RNA1509_13915, RNA1509_47297, RNA815_19171.1}
2. MligTC455_19689 125 2.6 Mlig455_012057

Neo: Int S/G2/M

Age: Down-Down-Down

 SMARCAL1 1.73 - - - - 0.984 0.746 Mlig455_012057 {REF} {Length: 3692} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=106.8]; HepA-related protein (HARP) [PF07443.15, score=66.4]; Helicase conserved C-terminal domain [PF00271.33, score=45.2]; Type III restriction enzyme, res subunit [PF04851.17, score=21.1]} {Human: ENSG00000138375, SMARCAL1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, [RH, Score=468, Expect=4e-152]} {Mouse: ENSMUSG00000039354, Smarcal1, SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1, [RH, Score=485, Expect=1e-159]} {Dmel: FBgn0031655, Marcal1, [RH, Score=374, Expect=1e-118]} {Celegans: WBGene00015806, smrc-1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 homolog, [RH, Score=409, Expect=5e-133]} {Smed: dd_Smed_v6_10238_0_1, dd_Smed_v6_10238_0_1, [RH, Score=510, Expect=4e-172]} {RNA1509_13058} {RNA1310_6023, RNA1509_13058} {RNA1509_13058, RNA815_1885.1}
3. MligTC455_19690 220 4.58 Mlig455_012074, Mlig455_029113

Neo: Int S/G2/M

Age: -

 SMARCAL1 0.982 - - - - 0.982 -

Mlig455_012074 {REF} {Length: 3421} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=106.8]; HepA-related protein (HARP) [PF07443.15, score=66.4]; Helicase conserved C-terminal domain [PF00271.33, score=45.2]; Type III restriction enzyme, res subunit [PF04851.17, score=21.1]} {Human: ENSG00000138375, SMARCAL1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, [RH, Score=468, Expect=4e-152]} {Mouse: ENSMUSG00000039354, Smarcal1, SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1, [RH, Score=485, Expect=1e-159]} {Dmel: FBgn0031655, Marcal1, [RH, Score=374, Expect=1e-118]} {Celegans: WBGene00015806, smrc-1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 homolog, [RH, Score=409, Expect=5e-133]} {Smed: dd_Smed_v6_10238_0_1, dd_Smed_v6_10238_0_1, [RH, Score=510, Expect=4e-172]} {RNA1509_13058} {RNA1310_6023} {RNA815_1885.1}

Mlig455_029113 {REF} {Length: 3560} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=109.3]; HepA-related protein (HARP) [PF07443.15, score=66.4]; Helicase conserved C-terminal domain [PF00271.33, score=45.1]; Type III restriction enzyme, res subunit [PF04851.17, score=24.6]} {Human: ENSG00000138375, SMARCAL1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, [RH, Score=470, Expect=4e-153]} {Mouse: ENSMUSG00000039354, Smarcal1, SWI/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 1, [RH, Score=488, Expect=1e-160]} {Dmel: FBgn0031655, Marcal1, [RH, Score=376, Expect=2e-119]} {Celegans: WBGene00015806, smrc-1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 homolog, [RH, Score=409, Expect=5e-133]} {Smed: dd_Smed_v6_10238_0_1, dd_Smed_v6_10238_0_1, [RH, Score=514, Expect=1e-173]} {RNA1509_13058, RNA1509_59594} {RNA1310_6023, RNA1509_59594} {RNA1509_59594, RNA815_1885.1}
4. MligTC455_45561 4026 83.87 Mlig455_013932

Neo: -

Age: -

 0.966 - - - 0.966 - - Mlig455_013932 {REF} {Length: 2119} {TRANSSPLICED} {RNA1509_12698, RNA1509_2216, RNA1509_30080, RNA1509_5047, RNA1509_60043} {RNA1310_11895, RNA1509_12698, RNA1509_2216, RNA1509_30080, RNA1509_5047, RNA1509_60043} {RNA1509_12698, RNA1509_2216, RNA1509_30080, RNA1509_5047, RNA1509_60043, RNA815_4289.1}
5. MligTC455_54160 1483 30.89 Mlig455_011321

Neo: -

Age: -

 PI4K2A 0.965 - - - 0.965 - - Mlig455_011321 {REF} {Length: 3841} {TRANSSPLICED} {Pfam: Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=176.0]} {Human: ENSG00000155252, PI4K2A, phosphatidylinositol 4-kinase type 2 alpha, [Score=352, Expect=9e-115]} {Mouse: ENSMUSG00000025178, Pi4k2a, phosphatidylinositol 4-kinase type 2 alpha, [Score=353, Expect=2e-115]; ENSMUSG00000029186, Pi4k2b, phosphatidylinositol 4-kinase type 2 beta, [Score=351, Expect=2e-114]} {Dmel: FBgn0037339, Pi4KIIalpha, [RH, Score=506, Expect=5e-172]} {Celegans: WBGene00022501, ZC8.6, [RH, Score=417, Expect=1e-138]} {Smed: dd_Smed_v6_10985_0_1, dd_Smed_v6_10985_0_1, [Score=318, Expect=5e-102]} {RNA1509_26257, RNA1509_26635, RNA1509_48855} {RNA1310_13340.1, RNA1509_26257, RNA1509_26635, RNA1509_48855} {RNA1509_26257, RNA1509_26635, RNA1509_48855, RNA815_4434}
6. MligTC455_27450 591 12.3 Mlig455_044917

Neo: -

Age: Up-Down-Up

Region-enriched R5: 1.456/0.00009
Region-enriched R4: 1.141/0.04869

 PPP6R3 0.956 - - - - 0.956 - Mlig455_044917 {REF} {Length: 4149} {TRANSSPLICED} {Pfam: SIT4 phosphatase-associated protein [PF04499.17, score=27.3]} {Human: ENSG00000110075, PPP6R3, protein phosphatase 6 regulatory subunit 3, [Score=138, Expect=4e-33]} {Mouse: ENSMUSG00000052296, Ppp6r1, protein phosphatase 6, regulatory subunit 1, [Score=139, Expect=2e-33]; ENSMUSG00000024908, Ppp6r3, protein phosphatase 6, regulatory subunit 3, [Score=139, Expect=2e-33]} {Dmel: FBgn0035688, CG10289, [Score=106, Expect=3e-23]} {Celegans: WBGene00008166, saps-1, SAPS (Phosphatase associated) domain protein, [Score=61.2, Expect=2e-09]} {Smed: dd_Smed_v6_2815_0_1, dd_Smed_v6_2815_0_1, [Score=76.3, Expect=4e-14]} {RNA1509_15946} {RNA1310_4877} {RNA815_12600.1}

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