Data search
Results for MligTC455_51689
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_51689 | 4859 | 101.24 | Mlig455_065041 | Neo: Neoblast Age: logFC(26M/2M)=0.298 Regeneration-upregulated BL: 1.125 Regeneration-enriched BL: 1.125 |
ALYREF | Mlig455_065041 {REF} {Length: 1812} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=54.4]; C-terminal duplication domain of Friend of PRMT1 [PF13865.8, score=41.5]} {Human: ENSG00000183684, ALYREF, Aly/REF export factor, [RH, Score=125, Expect=1e-34]} {Mouse: ENSMUSG00000060244, Alyref2, Aly/REF export factor 2, [RH, Score=130, Expect=5e-37]; ENSMUSG00000025134, Alyref, Aly/REF export factor, [RH, Score=126, Expect=4e-35]; ENSMUSG00000086727, 4931428L18Rik, RIKEN cDNA 4931428L18 gene, [RH, Score=125, Expect=4e-35]} {Dmel: FBgn0010774, Ref1, RNA and export factor binding protein 1, [RH, Score=141, Expect=6e-41]} {Celegans: WBGene00000120, aly-1, Ref/ALY RNA export adaptor family, [Score=59.3, Expect=1e-10]} {Smed: dd_Smed_v6_860_0_1, dd_Smed_v6_860_0_1, [RH, Score=102, Expect=6e-27]} {RNA1509_16812, RNA1509_21340} {RNA1310_16430.1, RNA1509_16812} {RNA1509_16812, RNA815_6185.1} |
Cumulative graph for MligTC455_51689
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.912 | 6.761 | 0.07539 | 0.60655 | |
| RegionR2 | 0.075 | 6.761 | 0.80130 | 1.00000 | |
| RegionR3 | 0.095 | 6.761 | 0.69838 | 1.00000 | |
| RegionR4 | 0.129 | 6.761 | 0.62913 | 0.93760 | |
| RegionR5 | 0.701 | 6.761 | 0.00147 | 0.01377 | |
| RegionR6 | 0.341 | 6.761 | 0.15874 | 0.70989 | |
| RegionR7 | 0.235 | 6.761 | 0.38101 | 1.00000 | |
| RegionR8 | -0.663 | 6.761 | 0.05770 | 0.46988 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.381 | 6.761 | 0.56342 | 1.00000 | |
| RegenerationR2 | 0.117 | 6.761 | 0.68472 | 0.95061 | |
| RegenerationR3 | 0.676 | 6.761 | 0.02487 | 0.28361 | |
| RegenerationR4 | 0.526 | 6.761 | 0.08414 | 0.45854 | |
| RegenerationR5 | 0.315 | 6.761 | 0.27305 | 0.70411 | |
| RegenerationR6 | 0.914 | 6.761 | 0.00197 | 0.05057 | |
| RegenerationBL | 1.125 | 6.761 | 0.00004 | 0.00224 | Specific for BL: 1.125 |
| RegenerationTP | 0.615 | 6.761 | 0.05288 | 0.37612 |
Genes with expression patterns similar to MligTC455_51689
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_51689 | 4859 | 101.24 | Mlig455_065041 | Neo: Neoblast Age: logFC(26M/2M)=0.298 Regeneration-upregulated BL: 1.125 Regeneration-enriched BL: 1.125 |
ALYREF | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_065041 {REF} {Length: 1812} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=54.4]; C-terminal duplication domain of Friend of PRMT1 [PF13865.8, score=41.5]} {Human: ENSG00000183684, ALYREF, Aly/REF export factor, [RH, Score=125, Expect=1e-34]} {Mouse: ENSMUSG00000060244, Alyref2, Aly/REF export factor 2, [RH, Score=130, Expect=5e-37]; ENSMUSG00000025134, Alyref, Aly/REF export factor, [RH, Score=126, Expect=4e-35]; ENSMUSG00000086727, 4931428L18Rik, RIKEN cDNA 4931428L18 gene, [RH, Score=125, Expect=4e-35]} {Dmel: FBgn0010774, Ref1, RNA and export factor binding protein 1, [RH, Score=141, Expect=6e-41]} {Celegans: WBGene00000120, aly-1, Ref/ALY RNA export adaptor family, [Score=59.3, Expect=1e-10]} {Smed: dd_Smed_v6_860_0_1, dd_Smed_v6_860_0_1, [RH, Score=102, Expect=6e-27]} {RNA1509_16812, RNA1509_21340} {RNA1310_16430.1, RNA1509_16812} {RNA1509_16812, RNA815_6185.1} |
| 2. | MligTC455_46156 | 2072 | 43.17 | Mlig455_040530 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.075/0.00657 |
MAGOHB | 3.999 | 0.751 | - | 0.707 | 0.878 | 0.953 | 0.710 | Mlig455_040530 {REF} {Length: 774} {TRANSSPLICED} {Pfam: Mago nashi protein [PF02792.16, score=247.2]} {Human: ENSG00000111196, MAGOHB, mago homolog B, exon junction complex subunit, [RH, Score=246, Expect=8e-85]; ENSG00000162385, MAGOH, mago homolog, exon junction complex subunit, [RH, Score=244, Expect=3e-84]} {Mouse: ENSMUSG00000030188, Magohb, mago homolog B, exon junction complex core component, [RH, Score=245, Expect=2e-84]; ENSMUSG00000028609, Magoh, mago homolog, exon junction complex core component, [RH, Score=244, Expect=2e-84]} {Dmel: FBgn0002736, mago, mago nashi, [RH, Score=247, Expect=1e-85]} {Celegans: WBGene00003123, mag-1, Protein mago nashi homolog, [RH, Score=251, Expect=6e-87]} {Smed: dd_Smed_v6_1217_0_1, dd_Smed_v6_1217_0_1, [RH, Score=238, Expect=4e-82]} {RNA1509_10998, RNA1509_31089, RNA1509_4519} {RNA1310_43868, RNA1509_10998, RNA1509_31089, RNA1509_4519} {RNA1509_10998, RNA1509_31089, RNA1509_4519, RNA815_22688} |
| 3. | MligTC455_41387 | 12105 | 252.19 | Mlig455_010629, Mlig455_010719 | Neo: Neoblast, stringent Age: Down-Up-Up, logFC(26M/2M)=0.282 Region-enriched R5: 1.342/0.00000 Regeneration-upregulated BL: 1.190 Regeneration-enriched BL: 1.190 |
RACK1 | 3.288 | 0.762 | - | - | 0.962 | 0.829 | 0.735 | Mlig455_010629 {REF} {Length: 1590} {Pfam: WD domain, G-beta repeat [PF00400.34, score=153.4]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=39.9]; Nucleoporin Nup120/160 [PF11715.10, score=24.1]; WD40-like domain [PF17005.7, score=19.2]} {Human: ENSG00000204628, RACK1, receptor for activated C kinase 1, [RH, Score=537, Expect=0.0]} {Mouse: ENSMUSG00000020372, Rack1, receptor for activated C kinase 1, [RH, Score=537, Expect=0.0]} {Dmel: FBgn0020618, Rack1, Receptor of activated protein kinase C 1, [RH, Score=482, Expect=1e-171]} {Celegans: WBGene00010556, rack-1, Guanine nucleotide-binding protein subunit beta-2-like 1, [RH, Score=444, Expect=6e-157]} {Smed: dd_Smed_v6_174_0_1, dd_Smed_v6_174_0_1, [RH, Score=499, Expect=5e-179]} {RNA1509_1960, RNA1509_56478} {RNA1310_19007, RNA1509_56478} {RNA1509_56478, RNA815_8458} Mlig455_010719 {REF} {Length: 1212} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=153.4]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=39.9]; Nucleoporin Nup120/160 [PF11715.10, score=24.1]; WD40-like domain [PF17005.7, score=19.2]} {Human: ENSG00000204628, RACK1, receptor for activated C kinase 1, [RH, Score=537, Expect=0.0]} {Mouse: ENSMUSG00000020372, Rack1, receptor for activated C kinase 1, [RH, Score=537, Expect=0.0]} {Dmel: FBgn0020618, Rack1, Receptor of activated protein kinase C 1, [RH, Score=482, Expect=1e-171]} {Celegans: WBGene00010556, rack-1, Guanine nucleotide-binding protein subunit beta-2-like 1, [RH, Score=444, Expect=6e-157]} {Smed: dd_Smed_v6_174_0_1, dd_Smed_v6_174_0_1, [RH, Score=499, Expect=5e-179]} {RNA1509_16113, RNA1509_23599, RNA1509_5722} {RNA1310_19007, RNA1509_16113, RNA1509_23599} {RNA1509_16113, RNA1509_23599, RNA815_8458} |
| 4. | MligTC455_36871 | 4132 | 86.08 | Mlig455_061085 | Neo: Irradiation Age: logFC(26M/2M)=0.831 Region-enriched R4: 1.146/0.00083 Regeneration-upregulated BL: 1.165 Regeneration-enriched BL: 1.165 |
H2AFV | 2.724 | - | - | - | 0.954 | 0.921 | 0.849 | Mlig455_061085 {REF} {Length: 929} {TRANSSPLICED} {Pfam: Core histone H2A/H2B/H3/H4 [PF00125.26, score=69.1]; C-terminus of histone H2A [PF16211.7, score=49.4]} {Human: ENSG00000105968, H2AFV, H2A histone family member V, [RH, Score=224, Expect=8e-77]; ENSG00000164032, H2AFZ, H2A histone family member Z, [RH, Score=223, Expect=2e-76]} {Mouse: ENSMUSG00000041126, H2afv, H2A histone family, member V, [RH, Score=224, Expect=5e-77]; ENSMUSG00000037894, H2afz, H2A histone family, member Z, [RH, Score=223, Expect=2e-76]} {Dmel: FBgn0001197, His2Av, Histone H2A variant, [RH, Score=223, Expect=3e-76]} {Celegans: WBGene00019947, htz-1, Histone H2A.V, [RH, Score=222, Expect=5e-76]} {Smed: dd_Smed_v6_2614_0_1, dd_Smed_v6_2614_0_1, [RH, Score=196, Expect=5e-66]} {RNA1509_18636} {RNA1310_60280} {RNA815_1839.1} |
| 5. | MligTC455_36870 | 4127 | 85.99 | Mlig455_035433 | Neo: Irradiation Age: Down-Up-Up Region-enriched R4: 1.158/0.00049 Regeneration-upregulated BL: 1.133 Regeneration-enriched BL: 1.133 |
H2AFV | 2.709 | - | - | - | 0.954 | 0.902 | 0.853 | Mlig455_035433 {REF} {Length: 929} {TRANSSPLICED} {Pfam: Core histone H2A/H2B/H3/H4 [PF00125.26, score=69.1]; C-terminus of histone H2A [PF16211.7, score=49.4]} {Human: ENSG00000105968, H2AFV, H2A histone family member V, [RH, Score=224, Expect=8e-77]; ENSG00000164032, H2AFZ, H2A histone family member Z, [RH, Score=223, Expect=2e-76]} {Mouse: ENSMUSG00000041126, H2afv, H2A histone family, member V, [RH, Score=224, Expect=5e-77]; ENSMUSG00000037894, H2afz, H2A histone family, member Z, [RH, Score=223, Expect=2e-76]} {Dmel: FBgn0001197, His2Av, Histone H2A variant, [RH, Score=223, Expect=3e-76]} {Celegans: WBGene00019947, htz-1, Histone H2A.V, [RH, Score=222, Expect=5e-76]} {Smed: dd_Smed_v6_2614_0_1, dd_Smed_v6_2614_0_1, [RH, Score=196, Expect=5e-66]} {RNA1509_18636, RNA1509_4518, RNA1509_6214} {RNA1310_60280, RNA1509_18636, RNA1509_4518, RNA1509_6214} {RNA1509_18636, RNA1509_4518, RNA1509_6214, RNA815_1839.1} |
| 6. | MligTC455_19942 | 770 | 16.04 | Mlig455_045672 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.530/0.00045 Regeneration-upregulated BL: 2.332 Regeneration-enriched BL: 2.332 |
RNPS1 | 2.537 | - | - | - | 0.951 | 0.722 | 0.864 | Mlig455_045672 {REF} {Length: 1204} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=46.9]} {Human: ENSG00000205937, RNPS1, RNA binding protein with serine rich domain 1, [RH, Score=119, Expect=6e-32]} {Mouse: ENSMUSG00000034681, Rnps1, ribonucleic acid binding protein S1, [RH, Score=119, Expect=7e-32]} {Dmel: FBgn0037707, RnpS1, RNA-binding protein S1, [RH, Score=94.0, Expect=5e-22]} {Celegans: WBGene00004388, rnp-5, RNP (RRM RNA binding domain) containing, [RH, Score=88.2, Expect=2e-20]} {Smed: dd_Smed_v6_1431_0_1, dd_Smed_v6_1431_0_1, [RH, Score=103, Expect=1e-25]} {RNA1509_14792} {RNA1310_28374, RNA1509_14792} {RNA1509_14792, RNA815_13087} |
| 7. | MligTC455_09552 | 2324 | 48.42 | Mlig455_057928 | Neo: Neoblast, stringent Age: Down-Up-Up Regeneration-upregulated BL: 1.398 Regeneration-enriched BL: 1.398 |
FBL | 2.38 | - | 0.719 | - | 0.953 | 0.708 | - | Mlig455_057928 {REF} {Length: 2231} {TRANSSPLICED} {Pfam: Fibrillarin [PF01269.19, score=346.9]; tRNA methyltransferase complex GCD14 subunit [PF08704.12, score=24.9]} {Human: ENSG00000105202, FBL, fibrillarin, [RH, Score=353, Expect=7e-122]; ENSG00000280548, FBL, fibrillarin, [RH, Score=353, Expect=7e-122]; ENSG00000188573, FBLL1, fibrillarin like 1, [RH, Score=339, Expect=4e-116]} {Mouse: ENSMUSG00000051062, Fbll1, fibrillarin-like 1, [RH, Score=340, Expect=5e-117]} {Dmel: FBgn0003062, Fib, Fibrillarin, [RH, Score=359, Expect=4e-124]} {Celegans: WBGene00001423, fib-1, rRNA 2'-O-methyltransferase fibrillarin, [Score=342, Expect=3e-117]} {Smed: dd_Smed_v6_2811_0_1, dd_Smed_v6_2811_0_1, [RH, Score=316, Expect=3e-108]} {RNA1509_2653, RNA1509_2873} {RNA1310_19218, RNA1509_2653, RNA1509_2873} {RNA1509_2653, RNA1509_2873, RNA815_13797} |
| 8. | MligTC455_09553 | 2323 | 48.39 | Mlig455_057964 | Neo: Irradiation Age: logFC(26M/2M)=0.350 Regeneration-upregulated BL: 1.398 Regeneration-enriched BL: 1.398 |
FBL | 2.378 | - | 0.719 | - | 0.951 | 0.708 | - | Mlig455_057964 {REF} {Length: 1690} {TRANSSPLICED} {Pfam: Fibrillarin [PF01269.19, score=347.0]; tRNA methyltransferase complex GCD14 subunit [PF08704.12, score=25.1]} {Human: ENSG00000105202, FBL, fibrillarin, [RH, Score=352, Expect=2e-121]; ENSG00000280548, FBL, fibrillarin, [RH, Score=352, Expect=2e-121]; ENSG00000188573, FBLL1, fibrillarin like 1, [RH, Score=338, Expect=2e-115]} {Mouse: ENSMUSG00000046865, Fbl, fibrillarin, [RH, Score=353, Expect=1e-121]; ENSMUSG00000051062, Fbll1, fibrillarin-like 1, [RH, Score=340, Expect=1e-116]} {Dmel: FBgn0003062, Fib, Fibrillarin, [Score=361, Expect=1e-124]} {Celegans: WBGene00001423, fib-1, rRNA 2'-O-methyltransferase fibrillarin, [RH, Score=343, Expect=1e-117]} {Smed: dd_Smed_v6_2811_0_1, dd_Smed_v6_2811_0_1, [RH, Score=315, Expect=8e-108]} {RNA1509_2873} {RNA1310_21307} {RNA815_13797} |
| 9. | MligTC455_37487 | 357 | 7.44 | Mlig455_048723 | Neo: Neoblast Age: - Region-enriched R5: 2.818/0.00001 |
AC116366.3 | 1.667 | - | - | - | 0.952 | - | 0.715 | Mlig455_048723 {REF} {Length: 1717} {Pfam: Putative exonuclease SbcCD, C subunit [PF13558.8, score=31.1]; RecF/RecN/SMC N terminal domain [PF02463.21, score=27.9]} {Human: ENSG00000283782, AC116366.3, novel protein, [RH, Score=276, Expect=1e-82]; ENSG00000113522, RAD50, RAD50 double strand break repair protein, [RH, Score=276, Expect=5e-82]} {Mouse: ENSMUSG00000020380, Rad50, RAD50 double strand break repair protein, [Score=278, Expect=7e-83]} {Dmel: FBgn0034728, rad50, [RH, Score=231, Expect=1e-66]} {Celegans: WBGene00004296, rad-50, DNA repair protein rad-50, [RH, Score=158, Expect=7e-42]} {Smed: dd_Smed_v6_11475_0_1, dd_Smed_v6_11475_0_1, [Score=249, Expect=3e-73]} {RNA1509_46929} {RNA1310_1701} {RNA815_40610} |
| 10. | MligTC455_41070 | 310 | 6.46 | Mlig455_047644 | Neo: Irradiation Age: Down-Up-Down |
0.957 | - | - | - | 0.957 | - | - | Mlig455_047644 {REF} {Length: 3607} {RNA1509_22396, RNA1509_50089} {RNA1310_14148.1, RNA1509_22396, RNA1509_50089} {RNA1509_22396, RNA1509_50089, RNA815_10177} | |
| 11. | MligTC455_15823 | 6025 | 125.53 | Mlig455_031852, Mlig455_031938 | Neo: Neoblast, stringent Age: - Region-enriched R5: 1.388/0.00002 Regeneration-upregulated BL: 1.361 Regeneration-enriched BL: 1.361 |
CCNB1 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_031852 {REF} {Length: 1803} {TRANSSPLICED} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=114.4]; Cyclin, C-terminal domain [PF02984.21, score=79.8]} {Human: ENSG00000134057, CCNB1, cyclin B1, [Score=207, Expect=4e-62]} {Mouse: ENSMUSG00000032218, Ccnb2, cyclin B2, [Score=200, Expect=5e-60]; ENSMUSG00000041431, Ccnb1, cyclin B1, [Score=194, Expect=1e-57]} {Dmel: FBgn0000405, CycB, Cyclin B, [Score=182, Expect=2e-52]} {Celegans: WBGene00000867, cyb-2.2, CYclin B, [Score=129, Expect=6e-34]} {Smed: dd_Smed_v6_7837_0_1, dd_Smed_v6_7837_0_1, [Score=109, Expect=1e-26]} {RNA1509_35079} {RNA1310_13754.1} {RNA815_5712.1} Mlig455_031938 {REF} {Length: 2070} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=114.4]; Cyclin, C-terminal domain [PF02984.21, score=79.7]} {Human: ENSG00000134057, CCNB1, cyclin B1, [Score=206, Expect=5e-62]} {Mouse: ENSMUSG00000032218, Ccnb2, cyclin B2, [Score=201, Expect=1e-60]; ENSMUSG00000041431, Ccnb1, cyclin B1, [Score=194, Expect=2e-57]} {Dmel: FBgn0000405, CycB, Cyclin B, [Score=181, Expect=5e-52]} {Celegans: WBGene00000867, cyb-2.2, CYclin B, [Score=129, Expect=6e-34]} {Smed: dd_Smed_v6_7837_0_1, dd_Smed_v6_7837_0_1, [Score=110, Expect=1e-26]} {RNA1509_23408, RNA1509_27076, RNA1509_35079, RNA1509_8675} {RNA1310_13754.1, RNA1509_23408, RNA1509_27076, RNA1509_35079, RNA1509_8675} {RNA1509_23408, RNA1509_27076, RNA1509_35079, RNA1509_8675, RNA815_5712.1} |
| 12. | MligTC455_20064 | 1169 | 24.35 | Mlig455_000647 | Neo: - Age: - |
GRB2 | 0.953 | - | - | 0.953 | - | - | - | Mlig455_000647 {REF} {Length: 3000} {TRANSSPLICED} {Pfam: Variant SH3 domain [PF14604.8, score=117.8]; SH3 domain [PF00018.30, score=105.0]; Variant SH3 domain [PF07653.19, score=104.0]; SH2 domain [PF00017.26, score=65.5]} {Human: ENSG00000177885, GRB2, growth factor receptor bound protein 2, [RH, Score=205, Expect=5e-66]} {Mouse: ENSMUSG00000059923, Grb2, growth factor receptor bound protein 2, [RH, Score=204, Expect=8e-66]} {Dmel: FBgn0004638, drk, downstream of receptor kinase, [RH, Score=211, Expect=6e-69]} {Celegans: WBGene00004774, sem-5, Sex muscle abnormal protein 5, [RH, Score=214, Expect=7e-70]} {Smed: dd_Smed_v6_4190_0_1, dd_Smed_v6_4190_0_1, [RH, Score=226, Expect=7e-75]} {RNA1509_52820, RNA1509_7263} {RNA1310_20298.2, RNA1509_52820, RNA1509_7263} {RNA1509_52820, RNA1509_7263, RNA815_19049} |
| 13. | MligTC455_29362 | 195 | 4.06 | Mlig455_025575 | Neo: - Age: - Regeneration-upregulated R6: 2.963 Regeneration-enriched R6: 2.963 |
HCCS | 0.952 | - | - | - | 0.952 | - | - | Mlig455_025575 {REF} {Length: 1775} {TRANSSPLICED} {Pfam: Cytochrome c/c1 heme lyase [PF01265.19, score=230.1]} {Human: ENSG00000004961, HCCS, holocytochrome c synthase, [RH, Score=256, Expect=4e-85]} {Mouse: ENSMUSG00000031352, Hccs, holocytochrome c synthetase, [RH, Score=266, Expect=7e-89]} {Dmel: FBgn0038925, Cchl, Cytochrome c heme lyase, [RH, Score=300, Expect=4e-102]} {Celegans: WBGene00011527, cchl-1, Probable cytochrome c-type heme lyase, [RH, Score=234, Expect=2e-76]} {Smed: dd_Smed_v6_2573_0_1, dd_Smed_v6_2573_0_1, [RH, Score=265, Expect=4e-89]} {RNA1509_4296} {RNA1310_16872, RNA1509_4296} {RNA1509_4296, RNA815_7646.1} |
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