Data search


search
Exact
Search

Results for MligTC455_51702

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_51702 116 2.41 Mlig455_033649, Mlig455_033659

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.645

Mlig455_033649 {REF} {Length: 2740} {Pfam: Metallo-peptidase family M12 [PF13688.8, score=30.8]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=24.2]; Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=21.6]} {Mouse: ENSMUSG00000032363, Adamts7, a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7, [Score=51.2, Expect=1e-06]} {RNA1310_37260} {RNA815_25007.2}

Mlig455_033659 {REF} {Length: 1578} {Pfam: Metallo-peptidase family M12 [PF13688.8, score=30.8]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=24.2]; Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=21.6]} {Mouse: ENSMUSG00000032363, Adamts7, a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7, [Score=51.2, Expect=1e-06]} {RNA1310_37260} {RNA815_64422}

Cumulative graph for MligTC455_51702

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.049 1.94 0.44629 1.00000
RegionR2 1.428 1.94 0.21860 0.58683
RegionR3 0.111 1.94 0.81983 1.00000
RegionR4 0.521 1.94 0.64390 0.94825
RegionR5 -0.578 1.94 0.96743 1.00000
RegionR6 1.205 1.94 0.23289 0.81678
RegionR7 -0.024 1.94 0.88205 1.00000
RegionR8 1.387 1.94 0.37291 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.482 1.94 0.99996 1.00000
RegenerationR2 0.512 1.94 0.44424 0.84252
RegenerationR3 1.013 1.94 0.24634 0.68034
RegenerationR4 -0.908 1.94 0.32965 0.76420
RegenerationR5 1.971 1.94 0.01181 0.19196
RegenerationR6 1.358 1.94 0.07753 0.34823
RegenerationBL 1.782 1.94 0.06371 0.29310
RegenerationTP 2.241 1.94 0.02939 0.28827


Genes with expression patterns similar to MligTC455_51702

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_51702 116 2.41 Mlig455_033649, Mlig455_033659

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.645

6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_033649 {REF} {Length: 2740} {Pfam: Metallo-peptidase family M12 [PF13688.8, score=30.8]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=24.2]; Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=21.6]} {Mouse: ENSMUSG00000032363, Adamts7, a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7, [Score=51.2, Expect=1e-06]} {RNA1310_37260} {RNA815_25007.2}

Mlig455_033659 {REF} {Length: 1578} {Pfam: Metallo-peptidase family M12 [PF13688.8, score=30.8]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=24.2]; Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=21.6]} {Mouse: ENSMUSG00000032363, Adamts7, a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7, [Score=51.2, Expect=1e-06]} {RNA1310_37260} {RNA815_64422}
2. MligTC455_50972 103 2.14 Mlig455_005384

Neo: -

Age: -

0.958 - - - - - 0.958 Mlig455_005384 {REF} {Length: 471} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_11238} {RNA1310_16270}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA