TomoSeq data search

Data search

Results for MligTC455_51705

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_51705	764	15.91	Mlig455_024275, Mlig455_051610	Neo: - Age: -	EAF1	Mlig455_024275 {REF} {Length: 2414} {TRANSSPLICED} {Pfam: RNA polymerase II transcription elongation factor [PF09816.11, score=60.3]} {Human: ENSG00000144597, EAF1, ELL associated factor 1, [RH, Score=97.1, Expect=2e-22]} {Mouse: ENSMUSG00000021890, Eaf1, ELL associated factor 1, [RH, Score=97.1, Expect=1e-22]} {Dmel: FBgn0033166, Eaf, ELL-associated factor, [RH, Score=89.7, Expect=4e-19]} {Smed: dd_Smed_v6_6643_0_1, dd_Smed_v6_6643_0_1, [RH, Score=84.0, Expect=1e-18]} {RNA1509_10712} {RNA1310_19998} {RNA815_8303} Mlig455_051610 {REF} {Length: 2438} {TRANSSPLICED} {Pfam: RNA polymerase II transcription elongation factor [PF09816.11, score=60.3]} {Human: ENSG00000144597, EAF1, ELL associated factor 1, [RH, Score=97.1, Expect=2e-22]} {Mouse: ENSMUSG00000021890, Eaf1, ELL associated factor 1, [RH, Score=97.4, Expect=1e-22]} {Dmel: FBgn0033166, Eaf, ELL-associated factor, [RH, Score=89.7, Expect=4e-19]} {Smed: dd_Smed_v6_6643_0_1, dd_Smed_v6_6643_0_1, [RH, Score=84.3, Expect=1e-18]} {RNA1509_10712, RNA1509_26342} {RNA1310_19998, RNA1509_10712, RNA1509_26342} {RNA1509_10712, RNA1509_26342, RNA815_8303}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_51705

764

15.91

Mlig455_024275, Mlig455_051610

Neo: -

Age: -

EAF1

Mlig455_024275 {REF} {Length: 2414} {TRANSSPLICED} {Pfam: RNA polymerase II transcription elongation factor [PF09816.11, score=60.3]} {Human: ENSG00000144597, EAF1, ELL associated factor 1, [RH, Score=97.1, Expect=2e-22]} {Mouse: ENSMUSG00000021890, Eaf1, ELL associated factor 1, [RH, Score=97.1, Expect=1e-22]} {Dmel: FBgn0033166, Eaf, ELL-associated factor, [RH, Score=89.7, Expect=4e-19]} {Smed: dd_Smed_v6_6643_0_1, dd_Smed_v6_6643_0_1, [RH, Score=84.0, Expect=1e-18]} {RNA1509_10712} {RNA1310_19998} {RNA815_8303}

Mlig455_051610 {REF} {Length: 2438} {TRANSSPLICED} {Pfam: RNA polymerase II transcription elongation factor [PF09816.11, score=60.3]} {Human: ENSG00000144597, EAF1, ELL associated factor 1, [RH, Score=97.1, Expect=2e-22]} {Mouse: ENSMUSG00000021890, Eaf1, ELL associated factor 1, [RH, Score=97.4, Expect=1e-22]} {Dmel: FBgn0033166, Eaf, ELL-associated factor, [RH, Score=89.7, Expect=4e-19]} {Smed: dd_Smed_v6_6643_0_1, dd_Smed_v6_6643_0_1, [RH, Score=84.3, Expect=1e-18]} {RNA1509_10712, RNA1509_26342} {RNA1310_19998, RNA1509_10712, RNA1509_26342} {RNA1509_10712, RNA1509_26342, RNA815_8303}

Cumulative graph for MligTC455_51705

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.86	4.409	0.43505	1.00000
RegionR2	1.239	4.409	0.02617	0.18166
RegionR3	0.224	4.409	0.60257	1.00000
RegionR4	-1.122	4.409	0.04787	0.18721
RegionR5	0.245	4.409	0.51793	0.88086
RegionR6	0.017	4.409	0.97067	1.00000
RegionR7	0.577	4.409	0.25294	0.87956
RegionR8	-0.32	4.409	0.64641	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-4.981	4.409	0.35309	1.00000
RegenerationR2	0.265	4.409	0.57339	0.90366
RegenerationR3	0.99	4.409	0.07655	0.45890
RegenerationR4	0.763	4.409	0.17707	0.61696
RegenerationR5	0.222	4.409	0.64805	0.93143
RegenerationR6	0.537	4.409	0.31925	0.66632
RegenerationBL	1.063	4.409	0.09105	0.35397
RegenerationTP	1.097	4.409	0.09651	0.48593

Genes with expression patterns similar to MligTC455_51705

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_51705	764	15.91	Mlig455_024275, Mlig455_051610	Neo: - Age: -	EAF1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_024275 {REF} {Length: 2414} {TRANSSPLICED} {Pfam: RNA polymerase II transcription elongation factor [PF09816.11, score=60.3]} {Human: ENSG00000144597, EAF1, ELL associated factor 1, [RH, Score=97.1, Expect=2e-22]} {Mouse: ENSMUSG00000021890, Eaf1, ELL associated factor 1, [RH, Score=97.1, Expect=1e-22]} {Dmel: FBgn0033166, Eaf, ELL-associated factor, [RH, Score=89.7, Expect=4e-19]} {Smed: dd_Smed_v6_6643_0_1, dd_Smed_v6_6643_0_1, [RH, Score=84.0, Expect=1e-18]} {RNA1509_10712} {RNA1310_19998} {RNA815_8303} Mlig455_051610 {REF} {Length: 2438} {TRANSSPLICED} {Pfam: RNA polymerase II transcription elongation factor [PF09816.11, score=60.3]} {Human: ENSG00000144597, EAF1, ELL associated factor 1, [RH, Score=97.1, Expect=2e-22]} {Mouse: ENSMUSG00000021890, Eaf1, ELL associated factor 1, [RH, Score=97.4, Expect=1e-22]} {Dmel: FBgn0033166, Eaf, ELL-associated factor, [RH, Score=89.7, Expect=4e-19]} {Smed: dd_Smed_v6_6643_0_1, dd_Smed_v6_6643_0_1, [RH, Score=84.3, Expect=1e-18]} {RNA1509_10712, RNA1509_26342} {RNA1310_19998, RNA1509_10712, RNA1509_26342} {RNA1509_10712, RNA1509_26342, RNA815_8303}
2.	MligTC455_48386	120	2.51	Mlig455_053381	Neo: - Age: logFC(26M/2M)=-0.376	ZC4H2	0.954	-	-	-	0.954	-	-	Mlig455_053381 {REF} {Length: 2396} {Pfam: Zinc finger-containing protein [PF10146.11, score=136.4]; Domain of unknown function (DUF4407) [PF14362.8, score=19.0]} {Human: ENSG00000126970, ZC4H2, zinc finger C4H2-type containing, [Score=74.3, Expect=4e-15]} {Mouse: ENSMUSG00000035062, Zc4h2, zinc finger, C4H2 domain containing, [Score=74.3, Expect=4e-15]} {Dmel: FBgn0030806, CG13001, [Score=64.7, Expect=2e-11]} {Celegans: WBGene00014153, vab-23, [Score=68.6, Expect=4e-13]} {Smed: dd_Smed_v6_6954_0_1, dd_Smed_v6_6954_0_1, [Score=63.9, Expect=2e-11]} {RNA1509_55758} {RNA1310_22786, RNA1509_55758} {RNA1509_55758, RNA815_23222}
3.	MligTC455_17740	45	0.95	Mlig455_005274	Neo: - Age: -	PKNOX1	0.953	-	-	0.953	-	-	-	Mlig455_005274 {REF} {Length: 4872} {TRANSSPLICED} {Pfam: Homeobox KN domain [PF05920.13, score=68.0]; N-terminal of Homeobox Meis and PKNOX1 [PF16493.7, score=67.2]; Homeodomain [PF00046.31, score=30.5]} {Human: ENSG00000160199, PKNOX1, PBX/knotted 1 homeobox 1, [RH, Score=207, Expect=2e-59]} {Mouse: ENSMUSG00000006705, Pknox1, Pbx/knotted 1 homeobox, [RH, Score=214, Expect=7e-62]} {Dmel: FBgn0001235, hth, homothorax, [Score=119, Expect=3e-28]} {Celegans: WBGene00006796, unc-62, Homeobox protein unc-62, [Score=109, Expect=6e-25]} {Smed: dd_Smed_v6_8606_0_1, dd_Smed_v6_8606_0_1, [Score=277, Expect=7e-83]} {RNA1509_9638} {RNA1310_1426.1} {RNA815_7214}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_51705

764

15.91

Mlig455_024275, Mlig455_051610

Neo: -

Age: -

EAF1

1.000

MligTC455_48386

120

2.51

Mlig455_053381

Neo: -

Age: logFC(26M/2M)=-0.376

ZC4H2

0.954

Mlig455_053381 {REF} {Length: 2396} {Pfam: Zinc finger-containing protein [PF10146.11, score=136.4]; Domain of unknown function (DUF4407) [PF14362.8, score=19.0]} {Human: ENSG00000126970, ZC4H2, zinc finger C4H2-type containing, [Score=74.3, Expect=4e-15]} {Mouse: ENSMUSG00000035062, Zc4h2, zinc finger, C4H2 domain containing, [Score=74.3, Expect=4e-15]} {Dmel: FBgn0030806, CG13001, [Score=64.7, Expect=2e-11]} {Celegans: WBGene00014153, vab-23, [Score=68.6, Expect=4e-13]} {Smed: dd_Smed_v6_6954_0_1, dd_Smed_v6_6954_0_1, [Score=63.9, Expect=2e-11]} {RNA1509_55758} {RNA1310_22786, RNA1509_55758} {RNA1509_55758, RNA815_23222}

MligTC455_17740

0.95

Mlig455_005274

Neo: -

Age: -

PKNOX1

0.953

Mlig455_005274 {REF} {Length: 4872} {TRANSSPLICED} {Pfam: Homeobox KN domain [PF05920.13, score=68.0]; N-terminal of Homeobox Meis and PKNOX1 [PF16493.7, score=67.2]; Homeodomain [PF00046.31, score=30.5]} {Human: ENSG00000160199, PKNOX1, PBX/knotted 1 homeobox 1, [RH, Score=207, Expect=2e-59]} {Mouse: ENSMUSG00000006705, Pknox1, Pbx/knotted 1 homeobox, [RH, Score=214, Expect=7e-62]} {Dmel: FBgn0001235, hth, homothorax, [Score=119, Expect=3e-28]} {Celegans: WBGene00006796, unc-62, Homeobox protein unc-62, [Score=109, Expect=6e-25]} {Smed: dd_Smed_v6_8606_0_1, dd_Smed_v6_8606_0_1, [Score=277, Expect=7e-83]} {RNA1509_9638} {RNA1310_1426.1} {RNA815_7214}