TomoSeq data search

Data search

Results for MligTC455_51718

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_51718	478	9.97	Mlig455_023523, Mlig455_023562	Neo: Irradiation Age: Up-Down-Up, logFC(26M/2M)=0.465		Mlig455_023523 {REF} {Length: 5550} {TRANSSPLICED} {Pfam: Nucleoporin subcomplex protein binding to Pom34 [PF10487.11, score=64.7]} {Smed: dd_Smed_v6_7245_0_1, dd_Smed_v6_7245_0_1, [RH, Score=149, Expect=9e-36]} {RNA1509_6357} {RNA1310_133.1} {RNA815_1252} Mlig455_023562 {REF} {Length: 5553} {TRANSSPLICED} {Pfam: Nucleoporin subcomplex protein binding to Pom34 [PF10487.11, score=60.7]} {Smed: dd_Smed_v6_7245_0_1, dd_Smed_v6_7245_0_1, [RH, Score=151, Expect=2e-36]} {RNA1509_6357} {RNA1310_133.1} {RNA815_1252}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_51718

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-5.581	3.751	0.99966	1.00000
RegionR2	1.944	3.751	0.06256	0.30176
RegionR3	2.169	3.751	0.01081	0.16149
RegionR4	1.193	3.751	0.25162	0.55122
RegionR5	1.053	3.751	0.28246	0.61157
RegionR6	1.86	3.751	0.04458	0.39439
RegionR7	2.137	3.751	0.05256	0.44078
RegionR8	-4.776	3.751	0.99979	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	8.05	3.751	0.01890	0.55300
RegenerationR2	0.389	3.751	0.43882	0.83945
RegenerationR3	0.629	3.751	0.23616	0.67030
RegenerationR4	1.193	3.751	0.03590	0.30630
RegenerationR5	1.546	3.751	0.00165	0.07036
RegenerationR6	0.958	3.751	0.06978	0.33102
RegenerationBL	2.603	3.751	0.02053	0.15525
RegenerationTP	2.325	3.751	0.21526	0.65803

Genes with expression patterns similar to MligTC455_51718

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_51718	478	9.97	Mlig455_023523, Mlig455_023562	Neo: Irradiation Age: Up-Down-Up, logFC(26M/2M)=0.465		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_023523 {REF} {Length: 5550} {TRANSSPLICED} {Pfam: Nucleoporin subcomplex protein binding to Pom34 [PF10487.11, score=64.7]} {Smed: dd_Smed_v6_7245_0_1, dd_Smed_v6_7245_0_1, [RH, Score=149, Expect=9e-36]} {RNA1509_6357} {RNA1310_133.1} {RNA815_1252} Mlig455_023562 {REF} {Length: 5553} {TRANSSPLICED} {Pfam: Nucleoporin subcomplex protein binding to Pom34 [PF10487.11, score=60.7]} {Smed: dd_Smed_v6_7245_0_1, dd_Smed_v6_7245_0_1, [RH, Score=151, Expect=2e-36]} {RNA1509_6357} {RNA1310_133.1} {RNA815_1252}
2.	MligTC455_25406	153	3.2	Mlig455_023037	Neo: - Age: -		0.952	-	-	-	0.952	-	-	Mlig455_023037 {REF} {Length: 3995} {RNA1509_22081, RNA1509_57656} {RNA1310_8282.1, RNA1509_57656} {RNA1509_57656, RNA815_10545.1}
3.	MligTC455_28063	833	17.35	Mlig455_056559	Neo: - Age: -	TFB1M	0.95	-	-	-	-	-	0.950	Mlig455_056559 {REF} {Length: 1318} {TRANSSPLICED} {Pfam: Ribosomal RNA adenine dimethylase [PF00398.22, score=119.9]; Methyltransferase domain [PF13649.8, score=22.8]; Protein of unknown function (DUF1698) [PF08003.13, score=19.7]; Methyltransferase domain [PF13489.8, score=18.8]} {Human: ENSG00000029639, TFB1M, transcription factor B1, mitochondrial, [RH, Score=237, Expect=3e-75]} {Mouse: ENSMUSG00000036983, Tfb1m, transcription factor B1, mitochondrial, [RH, Score=230, Expect=1e-72]} {Dmel: FBgn0261381, mtTFB1, Mitochondrial Transcription Factor B1, [RH, Score=200, Expect=2e-61]} {Celegans: WBGene00020189, tfbm-1, Dimethyladenosine transferase 1, mitochondrial, [RH, Score=243, Expect=1e-77]} {Smed: dd_Smed_v6_8684_0_1, dd_Smed_v6_8684_0_1, [RH, Score=283, Expect=4e-93]} {RNA1509_31959, RNA1509_57587} {RNA1310_25999, RNA1509_57587} {RNA1509_57587, RNA815_11217}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_51718

478

9.97

Mlig455_023523, Mlig455_023562

Neo: Irradiation

Age: Up-Down-Up, logFC(26M/2M)=0.465

1.000

MligTC455_25406

153

3.2

Mlig455_023037

Neo: -

Age: -

0.952

Mlig455_023037 {REF} {Length: 3995} {RNA1509_22081, RNA1509_57656} {RNA1310_8282.1, RNA1509_57656} {RNA1509_57656, RNA815_10545.1}

MligTC455_28063

833

17.35

Mlig455_056559

Neo: -

Age: -

TFB1M

0.95

0.950

Mlig455_056559 {REF} {Length: 1318} {TRANSSPLICED} {Pfam: Ribosomal RNA adenine dimethylase [PF00398.22, score=119.9]; Methyltransferase domain [PF13649.8, score=22.8]; Protein of unknown function (DUF1698) [PF08003.13, score=19.7]; Methyltransferase domain [PF13489.8, score=18.8]} {Human: ENSG00000029639, TFB1M, transcription factor B1, mitochondrial, [RH, Score=237, Expect=3e-75]} {Mouse: ENSMUSG00000036983, Tfb1m, transcription factor B1, mitochondrial, [RH, Score=230, Expect=1e-72]} {Dmel: FBgn0261381, mtTFB1, Mitochondrial Transcription Factor B1, [RH, Score=200, Expect=2e-61]} {Celegans: WBGene00020189, tfbm-1, Dimethyladenosine transferase 1, mitochondrial, [RH, Score=243, Expect=1e-77]} {Smed: dd_Smed_v6_8684_0_1, dd_Smed_v6_8684_0_1, [RH, Score=283, Expect=4e-93]} {RNA1509_31959, RNA1509_57587} {RNA1310_25999, RNA1509_57587} {RNA1509_57587, RNA815_11217}