Data search


search
Exact
Search

Results for MligTC455_51719

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_51719 318 6.63 Mlig455_023626

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.349

Mlig455_023626 {REF} {Length: 5562} {TRANSSPLICED} {Pfam: Nucleoporin subcomplex protein binding to Pom34 [PF10487.11, score=63.2]} {Smed: dd_Smed_v6_7245_0_1, dd_Smed_v6_7245_0_1, [RH, Score=149, Expect=7e-36]} {RNA1509_6357} {RNA1310_133.1, RNA1509_6357} {RNA1509_6357, RNA815_1252}

Cumulative graph for MligTC455_51719

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.142 3.35 0.52605 1.00000
RegionR2 0.41 3.35 0.65267 0.98717
RegionR3 0.479 3.35 0.49174 0.98999
RegionR4 0.692 3.35 0.36803 0.69115
RegionR5 0.634 3.35 0.30432 0.64064
RegionR6 0.478 3.35 0.49905 1.00000
RegionR7 -1.195 3.35 0.25742 0.88436
RegionR8 -0.356 3.35 0.75616 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -4.547 3.35 0.44360 1.00000
RegenerationR2 1.457 3.35 0.04732 0.35893
RegenerationR3 1.3 3.35 0.11184 0.52493
RegenerationR4 1.026 3.35 0.23388 0.68272
RegenerationR5 0.845 3.35 0.25771 0.68946
RegenerationR6 1.74 3.35 0.02592 0.20150
RegenerationBL 1.664 3.35 0.05733 0.27776
RegenerationTP -0.349 3.35 0.78573 1.00000


Genes with expression patterns similar to MligTC455_51719

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_51719 318 6.63 Mlig455_023626

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.349

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_023626 {REF} {Length: 5562} {TRANSSPLICED} {Pfam: Nucleoporin subcomplex protein binding to Pom34 [PF10487.11, score=63.2]} {Smed: dd_Smed_v6_7245_0_1, dd_Smed_v6_7245_0_1, [RH, Score=149, Expect=7e-36]} {RNA1509_6357} {RNA1310_133.1, RNA1509_6357} {RNA1509_6357, RNA815_1252}
2. MligTC455_51506 1346 28.05 Mlig455_020731, Mlig455_020802

Neo: Int S/G2/M

Age: -

1.779 - - - 0.825 0.954 -

Mlig455_020731 {REF} {Length: 2629} {TRANSSPLICED} {Pfam: Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=26.3]; WD domain, G-beta repeat [PF00400.34, score=23.5]} {Smed: dd_Smed_v6_12553_0_1, dd_Smed_v6_12553_0_1, [RH, Score=127, Expect=1e-32]} {RNA1509_15677, RNA1509_53184} {RNA1310_14716, RNA1509_15677, RNA1509_53184} {RNA1509_15677, RNA1509_53184, RNA815_16160}

Mlig455_020802 {REF} {Length: 1759} {TRANSSPLICED} {Pfam: Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=26.6]; WD domain, G-beta repeat [PF00400.34, score=23.4]} {Smed: dd_Smed_v6_12553_0_1, dd_Smed_v6_12553_0_1, [RH, Score=129, Expect=1e-33]} {RNA1509_15677} {RNA1310_14716} {RNA815_16160}
3. MligTC455_44103 1151 23.97 Mlig455_048968

Neo: Neoblast

Age: -

1.677 0.719 - - 0.958 - - Mlig455_048968 {REF} {Length: 1179} {TRANSSPLICED} {Pfam: Proteasome assembly chaperone 4 [PF16094.7, score=131.3]} {Smed: dd_Smed_v6_8414_0_1, dd_Smed_v6_8414_0_1, [RH, Score=66.6, Expect=1e-12]} {RNA1509_23893, RNA1509_34665} {RNA1310_9215, RNA1509_23893, RNA1509_34665} {RNA1509_23893, RNA1509_34665, RNA815_22970}
4. MligTC455_26870 125 2.61 Mlig455_008291

Neo: -

Age: -

0.964 - - - 0.964 - - Mlig455_008291 {REF} {Length: 1051} {RNA1509_48803} {RNA1310_35179} {RNA815_59234}
5. MligTC455_42740 325 6.76 Mlig455_037690

Neo: Int S/G2/M

Age: -

DOHH 0.954 - - - 0.954 - - Mlig455_037690 {REF} {Length: 1136} {TRANSSPLICED} {Pfam: HEAT repeats [PF13646.8, score=101.0]; PBS lyase HEAT-like repeat [PF03130.18, score=74.8]; HEAT repeat [PF02985.24, score=30.8]; HEAT-like repeat [PF13513.8, score=20.1]} {Human: ENSG00000129932, DOHH, deoxyhypusine hydroxylase, [RH, Score=224, Expect=3e-71]} {Mouse: ENSMUSG00000078440, Dohh, deoxyhypusine hydroxylase/monooxygenase, [RH, Score=233, Expect=7e-75]} {Dmel: FBgn0261479, nero, [RH, Score=234, Expect=2e-75]} {Celegans: WBGene00007555, dohh-1, Deoxyhypusine hydroxylase, [RH, Score=239, Expect=1e-77]} {Smed: dd_Smed_v6_10657_0_1, dd_Smed_v6_10657_0_1, [RH, Score=244, Expect=1e-79]} {RNA1509_23337} {RNA1310_30548} {RNA815_13793}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA