Data search


search
Exact
Search

Results for MligTC455_51798

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_51798 199 4.15 Mlig455_036190

Neo: Int S/G2/M

Age: -

Mlig455_036190 {REF} {Length: 1613} {TRANSSPLICED} {Pfam: Polyketide synthase dehydratase [PF14765.8, score=18.9]} {RNA1509_21448} {RNA1310_31836, RNA1509_21448} {RNA1509_21448, RNA815_14455}

Cumulative graph for MligTC455_51798

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 2.149 2.584 0.15605 0.77495
RegionR2 0.22 2.584 0.76610 1.00000
RegionR3 -0.592 2.584 0.32612 0.86417
RegionR4 -0.011 2.584 0.98669 1.00000
RegionR5 -0.38 2.584 0.46865 0.83092
RegionR6 -0.562 2.584 0.37180 0.95249
RegionR7 -0.292 2.584 0.72933 1.00000
RegionR8 -0.533 2.584 0.62267 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.43 2.584 0.30436 0.99840
RegenerationR2 0.01 2.584 0.98260 1.00000
RegenerationR3 1.119 2.584 0.12699 0.54859
RegenerationR4 1.054 2.584 0.15072 0.57898
RegenerationR5 1.676 2.584 0.00828 0.16496
RegenerationR6 1.616 2.584 0.03066 0.21856
RegenerationBL 1.936 2.584 0.03046 0.19466
RegenerationTP 1.603 2.584 0.07647 0.44246


Genes with expression patterns similar to MligTC455_51798

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_51798 199 4.15 Mlig455_036190

Neo: Int S/G2/M

Age: -

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_036190 {REF} {Length: 1613} {TRANSSPLICED} {Pfam: Polyketide synthase dehydratase [PF14765.8, score=18.9]} {RNA1509_21448} {RNA1310_31836, RNA1509_21448} {RNA1509_21448, RNA815_14455}
2. MligTC455_40048 1373 28.61 Mlig455_000540

Neo: Int S/G2/M

Age: Down-Up-Up

Region-enriched R5: 1.231/0.00009

Regeneration-upregulated BL: 1.427

Regeneration-enriched BL: 1.427

THOC7 0.974 - - - - 0.974 - Mlig455_000540 {REF} {Length: 1040} {TRANSSPLICED} {Pfam: Tho complex subunit 7 [PF05615.15, score=79.2]} {Human: ENSG00000163634, THOC7, THO complex 7, [RH, Score=95.9, Expect=6e-24]} {Mouse: ENSMUSG00000053453, Thoc7, THO complex 7, [RH, Score=95.9, Expect=4e-24]} {Dmel: FBgn0035110, thoc7, [RH, Score=73.2, Expect=4e-15]} {Smed: dd_Smed_v6_3428_0_1, dd_Smed_v6_3428_0_1, [RH, Score=121, Expect=2e-34]} {RNA1509_27604} {RNA1310_25169, RNA1509_27604} {RNA1509_27604, RNA815_13958}
3. MligTC455_18169 899 18.73 Mlig455_006969, Mlig455_011575

Neo: -

Age: -

EPN2 0.956 - - - - 0.956 -

Mlig455_006969 {REF} {Length: 3793} {TRANSSPLICED} {Pfam: ENTH domain [PF01417.22, score=165.2]; ANTH domain [PF07651.18, score=24.1]; VHS domain [PF00790.21, score=19.6]} {Human: ENSG00000072134, EPN2, epsin 2, [RH, Score=327, Expect=1e-104]} {Mouse: ENSMUSG00000001036, Epn2, epsin 2, [RH, Score=318, Expect=8e-102]} {Dmel: FBgn0028582, lqf, liquid facets, [RH, Score=290, Expect=1e-88]} {Celegans: WBGene00001329, epn-1, EPsiN (Endocytic protein) homolog, [RH, Score=304, Expect=9e-98]} {Smed: dd_Smed_v6_5602_0_1, dd_Smed_v6_5602_0_1, [RH, Score=292, Expect=1e-95]} {RNA1509_16968} {RNA1310_12053.1} {RNA815_8995}

Mlig455_011575 {REF} {Length: 3977} {TRANSSPLICED} {Pfam: ENTH domain [PF01417.22, score=165.2]; ANTH domain [PF07651.18, score=24.2]; VHS domain [PF00790.21, score=19.7]} {Human: ENSG00000072134, EPN2, epsin 2, [RH, Score=325, Expect=4e-104]} {Mouse: ENSMUSG00000001036, Epn2, epsin 2, [RH, Score=319, Expect=3e-102]} {Dmel: FBgn0028582, lqf, liquid facets, [RH, Score=291, Expect=6e-89]} {Celegans: WBGene00001329, epn-1, EPsiN (Endocytic protein) homolog, [RH, Score=303, Expect=1e-97]} {Smed: dd_Smed_v6_5602_0_1, dd_Smed_v6_5602_0_1, [RH, Score=292, Expect=9e-96]} {RNA1509_16968, RNA1509_56203} {RNA1310_12053.1, RNA1509_16968, RNA1509_56203} {RNA1509_16968, RNA1509_56203, RNA815_8995}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA