Data search


search
Exact
Search

Results for MligTC455_51805

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_51805 7837 163.27 Mlig455_061993

Neo: -

Age: Down-Down-Up

CHMP5 Mlig455_061993 {REF} {Length: 1185} {Pfam: Snf7 [PF03357.23, score=42.4]} {Human: ENSG00000086065, CHMP5, charged multivesicular body protein 5, [Score=94.4, Expect=1e-24]} {Mouse: ENSMUSG00000028419, Chmp5, charged multivesicular body protein 5, [Score=94.4, Expect=9e-25]} {Dmel: FBgn0036740, Vps60, Vacuolar protein sorting 60, [Score=83.6, Expect=1e-20]} {Celegans: WBGene00018290, vps-60, Related to yeast Vacuolar Protein Sorting factor, [Score=91.7, Expect=5e-24]} {Smed: dd_Smed_v6_1158_0_1, dd_Smed_v6_1158_0_1, [Score=95.9, Expect=1e-25]} {RNA1509_10926, RNA1509_12659, RNA1509_25388, RNA1509_33150, RNA1509_49103} {RNA1310_25926.1, RNA1509_10926, RNA1509_12659, RNA1509_33150, RNA1509_49103} {RNA1509_10926, RNA1509_12659, RNA1509_33150, RNA1509_49103, RNA815_8046}

Cumulative graph for MligTC455_51805

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.285 7.429 0.00169 0.13501
RegionR2 0.01 7.429 0.96504 1.00000
RegionR3 0.271 7.429 0.16011 0.67758
RegionR4 0.497 7.429 0.02303 0.11255
RegionR5 0.394 7.429 0.03371 0.14096
RegionR6 0.48 7.429 0.01308 0.19831
RegionR7 0.012 7.429 0.95674 1.00000
RegionR8 -0.378 7.429 0.14672 0.69833

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.075 7.429 0.89383 1.00000
RegenerationR2 -0.066 7.429 0.77757 0.98268
RegenerationR3 -0.039 7.429 0.87070 1.00000
RegenerationR4 0.027 7.429 0.91327 1.00000
RegenerationR5 -0.065 7.429 0.78249 0.98243
RegenerationR6 -0.223 7.429 0.35560 0.70066
RegenerationBL -0.003 7.429 0.98957 1.00000
RegenerationTP 0.736 7.429 0.00231 0.07805


Genes with expression patterns similar to MligTC455_51805

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_51805 7837 163.27 Mlig455_061993

Neo: -

Age: Down-Down-Up

CHMP5 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_061993 {REF} {Length: 1185} {Pfam: Snf7 [PF03357.23, score=42.4]} {Human: ENSG00000086065, CHMP5, charged multivesicular body protein 5, [Score=94.4, Expect=1e-24]} {Mouse: ENSMUSG00000028419, Chmp5, charged multivesicular body protein 5, [Score=94.4, Expect=9e-25]} {Dmel: FBgn0036740, Vps60, Vacuolar protein sorting 60, [Score=83.6, Expect=1e-20]} {Celegans: WBGene00018290, vps-60, Related to yeast Vacuolar Protein Sorting factor, [Score=91.7, Expect=5e-24]} {Smed: dd_Smed_v6_1158_0_1, dd_Smed_v6_1158_0_1, [Score=95.9, Expect=1e-25]} {RNA1509_10926, RNA1509_12659, RNA1509_25388, RNA1509_33150, RNA1509_49103} {RNA1310_25926.1, RNA1509_10926, RNA1509_12659, RNA1509_33150, RNA1509_49103} {RNA1509_10926, RNA1509_12659, RNA1509_33150, RNA1509_49103, RNA815_8046}
2. MligTC455_51804 7890 164.37 Mlig455_051630

Neo: -

Age: logFC(26M/2M)=-0.246

CHMP5 5.984 1.000 0.996 1.000 0.997 0.996 0.995 Mlig455_051630 {REF} {Length: 2311} {Pfam: Snf7 [PF03357.23, score=182.2]; Nucleopolyhedrovirus P10 protein [PF05531.14, score=22.0]} {Human: ENSG00000086065, CHMP5, charged multivesicular body protein 5, [RH, Score=294, Expect=1e-101]} {Mouse: ENSMUSG00000028419, Chmp5, charged multivesicular body protein 5, [RH, Score=294, Expect=9e-102]} {Dmel: FBgn0036740, Vps60, Vacuolar protein sorting 60, [RH, Score=281, Expect=1e-96]} {Celegans: WBGene00018290, vps-60, Related to yeast Vacuolar Protein Sorting factor, [RH, Score=271, Expect=6e-93]} {Smed: dd_Smed_v6_1158_0_1, dd_Smed_v6_1158_0_1, [RH, Score=342, Expect=6e-121]} {RNA1509_15403} {RNA1310_25926.1} {RNA815_8046}
3. MligTC455_37519 615 12.82 Mlig455_067447

Neo: -

Age: -

Region-enriched R5: 1.379/0.00528

ANKZF1 0.953 - - - 0.953 - - Mlig455_067447 {REF} {Length: 2657} {TRANSSPLICED} {Pfam: Bacteroidetes VLRF1 release factor [PF18826.3, score=162.9]; Vms1-associating treble clef domain [PF18716.3, score=45.6]} {Human: ENSG00000163516, ANKZF1, ankyrin repeat and zinc finger domain containing 1, [RH, Score=174, Expect=4e-45]} {Mouse: ENSMUSG00000026199, Ankzf1, ankyrin repeat and zinc finger domain containing 1, [RH, Score=149, Expect=7e-37]} {Celegans: WBGene00019457, vms-1, [RH, Score=117, Expect=5e-27]} {Smed: dd_Smed_v6_3789_0_1, dd_Smed_v6_3789_0_1, [Score=116, Expect=7e-27]} {RNA1509_8284} {RNA1310_6729, RNA1509_8284} {RNA1509_8284, RNA815_2078.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA