Data search


search
Exact
Search

Results for MligTC455_51849

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_51849 370 7.71 Mlig455_046770

Neo: -

Age: -

Mlig455_046770 {REF} {Length: 3901} {RNA1509_35209} {RNA1310_5234} {RNA815_10649}

Cumulative graph for MligTC455_51849

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.358 3.437 0.32840 0.97533
RegionR2 -0.364 3.437 0.58403 0.93920
RegionR3 0.185 3.437 0.71978 1.00000
RegionR4 1.062 3.437 0.10365 0.31477
RegionR5 -0.519 3.437 0.29973 0.63502
RegionR6 -0.345 3.437 0.51845 1.00000
RegionR7 -0.903 3.437 0.23296 0.85720
RegionR8 -0.473 3.437 0.58266 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.394 3.437 0.17202 0.91608
RegenerationR2 0.724 3.437 0.18415 0.62669
RegenerationR3 0.232 3.437 0.70178 0.94798
RegenerationR4 -0.041 3.437 0.94146 1.00000
RegenerationR5 0.876 3.437 0.13556 0.54492
RegenerationR6 0.182 3.437 0.78083 0.96774
RegenerationBL 0.125 3.437 0.88269 1.00000
RegenerationTP 0.709 3.437 0.38371 0.81785


Genes with expression patterns similar to MligTC455_51849

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_51849 370 7.71 Mlig455_046770

Neo: -

Age: -

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_046770 {REF} {Length: 3901} {RNA1509_35209} {RNA1310_5234} {RNA815_10649}
2. MligTC455_45561 4026 83.87 Mlig455_013932

Neo: -

Age: -

1.719 - - - - 0.970 0.749 Mlig455_013932 {REF} {Length: 2119} {TRANSSPLICED} {RNA1509_12698, RNA1509_2216, RNA1509_30080, RNA1509_5047, RNA1509_60043} {RNA1310_11895, RNA1509_12698, RNA1509_2216, RNA1509_30080, RNA1509_5047, RNA1509_60043} {RNA1509_12698, RNA1509_2216, RNA1509_30080, RNA1509_5047, RNA1509_60043, RNA815_4289.1}
3. MligTC455_48838 2400 50 Mlig455_037871, Mlig455_037969

Neo: -

Age: -

TOP1 1.713 - - 0.745 - 0.968 -

Mlig455_037871 {REF} {Length: 4421} {TRANSSPLICED} {Pfam: Eukaryotic DNA topoisomerase I, catalytic core [PF01028.22, score=330.2]; Eukaryotic DNA topoisomerase I, DNA binding fragment [PF02919.17, score=325.6]; C-terminal topoisomerase domain [PF14370.8, score=108.0]} {Human: ENSG00000198900, TOP1, DNA topoisomerase I, [RH, Score=811, Expect=0.0]; ENSG00000184428, TOP1MT, DNA topoisomerase I mitochondrial, [RH, Score=773, Expect=0.0]} {Mouse: ENSMUSG00000070544, Top1, topoisomerase (DNA) I, [RH, Score=810, Expect=0.0]} {Dmel: FBgn0004924, Top1, Topoisomerase 1, [RH, Score=777, Expect=0.0]} {Celegans: WBGene00006595, top-1, DNA topoisomerase 1, [RH, Score=704, Expect=0.0]} {Smed: dd_Smed_v6_2421_0_1, dd_Smed_v6_2421_0_1, [RH, Score=753, Expect=0.0]} {RNA1509_2317} {RNA1310_5051} {RNA815_2481.1}

Mlig455_037969 {REF} {Length: 4404} {TRANSSPLICED} {Pfam: Eukaryotic DNA topoisomerase I, catalytic core [PF01028.22, score=331.1]; Eukaryotic DNA topoisomerase I, DNA binding fragment [PF02919.17, score=327.9]; C-terminal topoisomerase domain [PF14370.8, score=108.0]} {Human: ENSG00000198900, TOP1, DNA topoisomerase I, [RH, Score=808, Expect=0.0]; ENSG00000184428, TOP1MT, DNA topoisomerase I mitochondrial, [RH, Score=776, Expect=0.0]} {Mouse: ENSMUSG00000070544, Top1, topoisomerase (DNA) I, [RH, Score=807, Expect=0.0]} {Dmel: FBgn0004924, Top1, Topoisomerase 1, [RH, Score=780, Expect=0.0]} {Celegans: WBGene00006595, top-1, DNA topoisomerase 1, [RH, Score=702, Expect=0.0]} {Smed: dd_Smed_v6_2421_0_1, dd_Smed_v6_2421_0_1, [RH, Score=750, Expect=0.0]} {RNA1509_18181, RNA1509_2317, RNA1509_30527, RNA1509_31724} {RNA1310_5051, RNA1509_18181, RNA1509_2317, RNA1509_30527, RNA1509_31724} {RNA1509_18181, RNA1509_2317, RNA1509_30527, RNA1509_31724, RNA815_2481.1}
4. MligTC455_49504 257 5.35 Mlig455_038851

Neo: -

Age: -

0.973 - - - 0.973 - - Mlig455_038851 {REF} {Length: 2596} {TRANSSPLICED} {RNA1509_23457, RNA1509_32348} {RNA1310_13685, RNA1509_23457, RNA1509_32348} {RNA1509_23457, RNA1509_32348, RNA815_5694}
5. MligTC455_23776 1268 26.41 Mlig455_022422

Neo: -

Age: -

0.951 - - - - 0.951 - Mlig455_022422 {REF} {Length: 1936} {RNA1509_49905} {RNA1310_51655} {RNA815_1417.1}
6. MligTC455_13942 192 4 Mlig455_015587

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.561

SYT14 0.95 - - - - 0.950 - Mlig455_015587 {REF} {Length: 3362} {Pfam: C2 domain [PF00168.32, score=38.6]} {Human: ENSG00000143469, SYT14, synaptotagmin 14, [Score=133, Expect=5e-32]; ENSG00000139973, SYT16, synaptotagmin 16, [Score=129, Expect=2e-30]} {Mouse: ENSMUSG00000016200, Syt14, synaptotagmin XIV, [Score=134, Expect=8e-32]} {Dmel: FBgn0261086, Syt14, Synaptotagmin 14, [Score=108, Expect=3e-24]} {Smed: dd_Smed_v6_9548_0_2, dd_Smed_v6_9548_0_2, [Score=136, Expect=2e-34]} {RNA1509_12596} {RNA1310_670.1, RNA1509_12596} {RNA1509_12596, RNA815_7240.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA