Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_51920 | 10 | 0.20 | Mlig455_044847 | Neo: - |
Mlig455_044847 {REF} {Length: 601} {NoTransDecoderORF} {RNA1509_20899} {RNA1310_69132} {RNA815_11337} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | 1.552 | 0.588 | 0.99926 | 1.00000 | |
RegionR2 | -0.377 | 0.588 | 0.99941 | 1.00000 | |
RegionR3 | -0.531 | 0.588 | 0.99996 | 1.00000 | |
RegionR4 | 0.267 | 0.588 | 0.99938 | 1.00000 | |
RegionR5 | -0.538 | 0.588 | 0.99933 | 1.00000 | |
RegionR6 | -0.537 | 0.588 | 0.99924 | 1.00000 | |
RegionR7 | 0.07 | 0.588 | 0.99924 | 1.00000 | |
RegionR8 | 0.094 | 0.588 | 0.99924 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | -0.484 | 0.588 | 0.99932 | 1.00000 | |
RegenerationR2 | 4.374 | 0.588 | 0.08022 | 0.45643 | |
RegenerationR3 | 0.116 | 0.588 | 0.99970 | 1.00000 | |
RegenerationR4 | 0.691 | 0.588 | 0.62394 | 0.92194 | |
RegenerationR5 | 1.586 | 0.588 | 0.41332 | 0.80770 | |
RegenerationR6 | 1.998 | 0.588 | 0.34047 | 0.68629 | |
RegenerationBL | 0.393 | 0.588 | 0.99938 | 1.00000 | |
RegenerationTP | 2.425 | 0.588 | 0.62015 | 0.97259 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_51920 | 10 | 0.2 | Mlig455_044847 | Neo: - |
1 | - | - | - | - | - | 1.000 | Mlig455_044847 {REF} {Length: 601} {NoTransDecoderORF} {RNA1509_20899} {RNA1310_69132} {RNA815_11337} | |
2. | MligTC455_12999 | 17 | 0.34 | Mlig455_056142 | Neo: - Age: logFC(26M/2M)=-0.895 |
0.979 | - | - | - | - | - | 0.979 | Mlig455_056142 {REF} {Length: 842} {NoTransDecoderORF} {RNA1509_2486} {RNA1310_82742} {RNA815_5954.1} | |
3. | MligTC455_50349 | 31 | 0.65 | Mlig455_043966 | Neo: - Age: - |
0.973 | - | - | - | - | - | 0.973 | Mlig455_043966 {REF} {Length: 615} {NoTransDecoderORF} {RNA1509_42587} {RNA1310_27550.1} {RNA815_55700} | |
4. | MligTC455_06944 | 52 | 1.08 | Mlig455_063986 | Neo: - Age: - |
0.968 | - | - | - | - | - | 0.968 | Mlig455_063986 {REF} {Length: 1807} {RNA1310_68549} {RNA815_47840} | |
5. | MligTC455_43959 | 93 | 1.94 | Mlig455_020049, Mlig455_022295 | Neo: - Age: Down-Up-Up |
0.963 | - | - | - | - | - | 0.963 | Mlig455_020049 {REF} {Length: 1131} {RNA1509_47842} {RNA1310_6450.2} {RNA815_45397} Mlig455_022295 {REF} {Length: 1494} {RNA1509_47842} {RNA1310_6450.2} {RNA815_45397} |
|
6. | MligTC455_46170 | 9 | 0.19 | Mlig455_022412, Mlig455_047655, Mlig455_055613 | Neo: - Age: Up-Down-Down |
GTF2IRD2, GTF2IRD2B | 0.96 | - | - | - | - | - | 0.960 | Mlig455_022412 {REF} {Length: 3025} {Pfam: Domain of unknown function (DUF4371) [PF14291.8, score=38.5]; Spin-doc zinc-finger [PF18658.3, score=24.1]} {Human: ENSG00000174428, GTF2IRD2B, GTF2I repeat domain containing 2B, [RH, Score=393, Expect=3e-125]; ENSG00000196275, GTF2IRD2, GTF2I repeat domain containing 2, [RH, Score=390, Expect=2e-124]} {Mouse: ENSMUSG00000015942, Gtf2ird2, GTF2I repeat domain containing 2, [RH, Score=365, Expect=4e-115]} {Smed: dd_Smed_v6_25074_0_1, dd_Smed_v6_25074_0_1, [RH, Score=254, Expect=2e-76]} {RNA1509_50311} {RNA1310_1521.1, RNA1509_50311} {RNA1509_50311, RNA815_920.1} Mlig455_047655 {REF} {Length: 2123} {Pfam: Domain of unknown function (DUF4371) [PF14291.8, score=37.2]; Spin-doc zinc-finger [PF18658.3, score=24.1]} {Human: ENSG00000196275, GTF2IRD2, GTF2I repeat domain containing 2, [RH, Score=387, Expect=6e-123]; ENSG00000174428, GTF2IRD2B, GTF2I repeat domain containing 2B, [RH, Score=387, Expect=3e-123]} {Mouse: ENSMUSG00000015942, Gtf2ird2, GTF2I repeat domain containing 2, [RH, Score=360, Expect=4e-113]} {Smed: dd_Smed_v6_25074_0_1, dd_Smed_v6_25074_0_1, [RH, Score=256, Expect=3e-77]} {RNA1509_50311} {RNA1310_584.1} {RNA815_920.1} Mlig455_055613 {REF} {Length: 2267} {Pfam: Domain of unknown function (DUF4371) [PF14291.8, score=37.2]; Spin-doc zinc-finger [PF18658.3, score=24.1]} {Human: ENSG00000174428, GTF2IRD2B, GTF2I repeat domain containing 2B, [RH, Score=391, Expect=1e-124]; ENSG00000196275, GTF2IRD2, GTF2I repeat domain containing 2, [RH, Score=390, Expect=3e-124]} {Mouse: ENSMUSG00000015942, Gtf2ird2, GTF2I repeat domain containing 2, [RH, Score=364, Expect=2e-114]} {Smed: dd_Smed_v6_25074_0_1, dd_Smed_v6_25074_0_1, [RH, Score=255, Expect=6e-77]} {RNA1509_50311} {RNA1310_584.1} {RNA815_920.1} |
7. | MligTC455_42130 | 49 | 1.02 | Mlig455_031418 | Neo: - Age: - |
0.958 | - | - | - | - | - | 0.958 | Mlig455_031418 {REF} {Length: 1285} {RNA1310_89057} | |
8. | MligTC455_42663 | 15 | 0.32 | Mlig455_037730 | Neo: - Age: - |
0.958 | - | - | - | - | - | 0.958 | Mlig455_037730 {REF} {Length: 250} {NoTransDecoderORF} {RNA1310_96594} | |
9. | MligTC455_05737 | 9 | 0.19 | Mlig455_048810 | Neo: - Age: - |
0.957 | - | - | - | - | - | 0.957 | Mlig455_048810 {REF} {Length: 1184} {NoTransDecoderORF} {RNA1310_118235} | |
10. | MligTC455_16735 | 31 | 0.64 | Mlig455_010958, Mlig455_033088 | Neo: - Age: - |
0.957 | - | - | - | - | - | 0.957 | Mlig455_010958 {REF} {Length: 959} {RNA1509_35668} {RNA1310_30833} {RNA815_18824.1} Mlig455_033088 {REF} {Length: 912} {RNA1509_35668} {RNA1310_30833} {RNA815_18824.1} |
|
11. | MligTC455_07101 | 46 | 0.96 | Mlig455_062761 | Neo: - Age: Down-Up-Down |
POU4F1 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_062761 {REF} {Length: 2816} {Pfam: Pou domain - N-terminal to homeobox domain [PF00157.19, score=109.3]; Homeodomain [PF00046.31, score=67.1]; Helix-turn-helix domain [PF13560.8, score=22.0]} {Human: ENSG00000152192, POU4F1, POU class 4 homeobox 1, [RH, Score=271, Expect=7e-87]; ENSG00000151615, POU4F2, POU class 4 homeobox 2, [RH, Score=269, Expect=4e-86]; ENSG00000091010, POU4F3, POU class 4 homeobox 3, [RH, Score=267, Expect=2e-86]} {Mouse: ENSMUSG00000048349, Pou4f1, POU domain, class 4, transcription factor 1, [RH, Score=271, Expect=6e-87]; ENSMUSG00000031688, Pou4f2, POU domain, class 4, transcription factor 2, [RH, Score=268, Expect=3e-86]; ENSMUSG00000024497, Pou4f3, POU domain, class 4, transcription factor 3, [RH, Score=266, Expect=2e-86]} {Dmel: FBgn0000028, acj6, abnormal chemosensory jump 6, [RH, Score=265, Expect=3e-85]} {Celegans: WBGene00006818, unc-86, Transcription factor unc-86, [RH, Score=236, Expect=4e-75]} {Smed: dd_Smed_v6_15555_0_1, dd_Smed_v6_15555_0_1, [RH, Score=305, Expect=5e-101]} {RNA1509_57422} {RNA1310_8139.2} {RNA815_32659} |
12. | MligTC455_20686 | 474 | 9.88 | Mlig455_041407, Mlig455_041444, Mlig455_060901 | Neo: - Age: - Region-enriched R2: 1.932/0.02120 |
0.954 | - | - | - | - | - | 0.954 | Mlig455_041407 {REF} {Length: 1387} {Smed: dd_Smed_v6_12479_0_1, dd_Smed_v6_12479_0_1, [RH, Score=73.6, Expect=3e-17]} {RNA1509_36978} {RNA1310_41260} {RNA815_26996} Mlig455_041444 {REF} {Length: 935} {Smed: dd_Smed_v6_12479_0_1, dd_Smed_v6_12479_0_1, [RH, Score=73.6, Expect=4e-17]} {RNA1509_36978} {RNA1310_41260} {RNA815_47140} Mlig455_060901 {REF} {Length: 2316} {Smed: dd_Smed_v6_12479_0_1, dd_Smed_v6_12479_0_1, [RH, Score=73.6, Expect=3e-17]} {RNA1509_36978} {RNA1310_41260} {RNA815_47140} |
|
13. | MligTC455_47776 | 17 | 0.35 | Mlig455_034068 | Neo: - Age: - |
CHRNA9 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_034068 {REF} {Length: 1878} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=139.6]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=90.5]} {Human: ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=206, Expect=3e-60]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=204, Expect=3e-59]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=204, Expect=3e-59]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=203, Expect=4e-59]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=201, Expect=2e-58]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=200, Expect=2e-58]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=196, Expect=2e-56]} {Mouse: ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=208, Expect=3e-61]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=207, Expect=6e-61]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=204, Expect=2e-59]; ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=201, Expect=4e-59]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=216, Expect=1e-63]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=211, Expect=2e-62]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=211, Expect=2e-62]} {RNA1310_14388.1} {RNA815_21155} |
14. | MligTC455_07100 | 97 | 2.02 | Mlig455_003124, Mlig455_014179 | Neo: - Age: - |
POU4F1 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_003124 {REF} {Length: 2773} {Pfam: Pou domain - N-terminal to homeobox domain [PF00157.19, score=109.3]; Homeodomain [PF00046.31, score=67.1]; Helix-turn-helix domain [PF13560.8, score=22.0]} {Human: ENSG00000152192, POU4F1, POU class 4 homeobox 1, [RH, Score=271, Expect=6e-87]; ENSG00000151615, POU4F2, POU class 4 homeobox 2, [RH, Score=269, Expect=4e-86]; ENSG00000091010, POU4F3, POU class 4 homeobox 3, [RH, Score=267, Expect=2e-86]} {Mouse: ENSMUSG00000048349, Pou4f1, POU domain, class 4, transcription factor 1, [RH, Score=271, Expect=6e-87]; ENSMUSG00000031688, Pou4f2, POU domain, class 4, transcription factor 2, [RH, Score=268, Expect=3e-86]; ENSMUSG00000024497, Pou4f3, POU domain, class 4, transcription factor 3, [RH, Score=267, Expect=2e-86]} {Dmel: FBgn0000028, acj6, abnormal chemosensory jump 6, [RH, Score=264, Expect=4e-85]} {Celegans: WBGene00006818, unc-86, Transcription factor unc-86, [RH, Score=236, Expect=2e-74]} {Smed: dd_Smed_v6_15555_0_1, dd_Smed_v6_15555_0_1, [RH, Score=305, Expect=7e-101]} {RNA1509_57422} {RNA1310_8139.2} {RNA815_32659} Mlig455_014179 {REF} {Length: 532} {NoTransDecoderORF} {RNA1310_72815} {RNA815_37705} |
15. | MligTC455_18215 | 8 | 0.17 | Mlig455_022771 | Neo: - Age: - |
ZAN | 0.952 | - | - | - | - | - | 0.952 | Mlig455_022771 {REF} {Length: 2198} {Pfam: Herpes virus major outer envelope glycoprotein (BLLF1) [PF05109.15, score=23.9]} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=105, Expect=3e-24]} {RNA1509_42251, RNA1509_55150} {RNA1310_26349, RNA1509_42251, RNA1509_55150} {RNA1509_42251, RNA1509_55150, RNA815_5817} |
16. | MligTC455_31658 | 13 | 0.28 | Mlig455_008283, Mlig455_009320, Mlig455_024153, Mlig455_034528, Mlig455_042959, Mlig455_062047, Mlig455_067602 | Neo: Irradiation |
PIF1 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_008283 {REF} {Length: 3909} {Pfam: PIF1-like helicase [PF05970.16, score=202.1]; Helitron helicase-like domain at N-terminus [PF14214.8, score=174.2]; AAA domain [PF13604.8, score=46.1]; AAA domain [PF13245.8, score=18.8]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=69.7, Expect=3e-11]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=66.2, Expect=1e-10]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=76.6, Expect=8e-14]} {Celegans: WBGene00019136, F59H6.5, [Score=645, Expect=0.0]} {Smed: dd_Smed_v6_91935_0_1, dd_Smed_v6_91935_0_1, [Score=68.6, Expect=2e-13]} {RNA1509_5036} {RNA1310_728.1} {RNA815_356.1} Mlig455_009320 {REF} {Length: 4963} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=175.8]} {Celegans: WBGene00019136, F59H6.5, [Score=428, Expect=2e-130]} {Smed: dd_Smed_v6_5211_0_1, dd_Smed_v6_5211_0_1, [Score=73.9, Expect=1e-14]} {RNA1509_5036} {RNA1310_4048.1} {RNA815_356.1} Mlig455_024153 {REF} {Length: 3481} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=176.3]} {Celegans: WBGene00019136, F59H6.5, [Score=490, Expect=2e-153]} {Smed: dd_Smed_v6_22430_0_1, dd_Smed_v6_22430_0_1, [Score=57.8, Expect=4e-10]} {RNA1509_5036} {RNA1310_11485} {RNA815_356.1} Mlig455_034528 {REF} {Length: 4017} {Pfam: PIF1-like helicase [PF05970.16, score=335.4]; Helitron helicase-like domain at N-terminus [PF14214.8, score=172.8]; AAA domain [PF13604.8, score=48.2]; UvrD-like helicase C-terminal domain [PF13538.8, score=26.9]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=127, Expect=3e-29]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=121, Expect=1e-27]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=124, Expect=2e-28]} {Celegans: WBGene00022692, ZK250.9, [Score=723, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=115, Expect=3e-26]} {RNA1509_5036} {RNA1310_728.1} {RNA815_356.1} Mlig455_042959 {REF} {Length: 3203} {Pfam: PIF1-like helicase [PF05970.16, score=188.5]; Helitron helicase-like domain at N-terminus [PF14214.8, score=153.1]; AAA domain [PF13604.8, score=44.1]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=68.6, Expect=5e-11]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=63.9, Expect=5e-10]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=72.4, Expect=2e-12]} {Celegans: WBGene00019136, F59H6.5, [Score=581, Expect=0.0]} {Smed: dd_Smed_v6_91935_0_1, dd_Smed_v6_91935_0_1, [Score=70.9, Expect=2e-14]} {RNA1509_5036} {RNA1310_11485} {RNA815_356.1} Mlig455_062047 {REF} {Length: 4880} {Pfam: PIF1-like helicase [PF05970.16, score=197.7]; Helitron helicase-like domain at N-terminus [PF14214.8, score=104.7]; AAA domain [PF13604.8, score=45.9]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=67.4, Expect=1e-10]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=63.9, Expect=7e-10]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=73.2, Expect=1e-12]} {Celegans: WBGene00019136, F59H6.5, [Score=544, Expect=2e-169]} {Smed: dd_Smed_v6_91935_0_1, dd_Smed_v6_91935_0_1, [Score=70.5, Expect=5e-14]} {RNA1509_5036} {RNA1310_11485} {RNA815_356.1} Mlig455_067602 {REF} {Length: 6331} {Pfam: PIF1-like helicase [PF05970.16, score=333.7]; Helitron helicase-like domain at N-terminus [PF14214.8, score=174.7]; AAA domain [PF13604.8, score=45.8]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.5]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=125, Expect=2e-28]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=120, Expect=2e-27]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=122, Expect=5e-28]} {Celegans: WBGene00019136, F59H6.5, [RH, Score=771, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=116, Expect=4e-26]} {RNA1509_5036} {RNA1310_728.1} {RNA815_356.1} |
17. | MligTC455_31685 | 83 | 1.73 | Mlig455_036333, Mlig455_036334, Mlig455_036356, Mlig455_054550 | Neo: - Age: - |
SLC5A7 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_036333 {REF} {Length: 491} {tRNA: Ala(CGC),pseudo, score=26.8} {RNA1509_45595} {RNA1310_13430.1} {RNA815_31014} Mlig455_036334 {REF} {Length: 599} {NoTransDecoderORF} {RNA1310_51434} {RNA815_35996} Mlig455_036356 {REF} {Length: 4094} {tRNA: Ala(CGC),pseudo, score=26.8} {Pfam: Sodium:solute symporter family [PF00474.19, score=114.3]} {Human: ENSG00000115665, SLC5A7, solute carrier family 5 member 7, [RH, Score=591, Expect=0.0]} {Mouse: ENSMUSG00000023945, Slc5a7, solute carrier family 5 (choline transporter), member 7, [RH, Score=595, Expect=0.0]} {Dmel: FBgn0038641, CG7708, [RH, Score=602, Expect=0.0]} {Celegans: WBGene00000501, cho-1, High-affinity choline transporter 1, [RH, Score=553, Expect=0.0]} {Smed: dd_Smed_v6_12883_0_1, dd_Smed_v6_12883_0_1, [RH, Score=649, Expect=0.0]} {RNA1509_56795} {RNA1310_15022.1} {RNA815_33275} Mlig455_054550 {REF} {Length: 303} {NoTransDecoderORF} {RNA1509_46688} {RNA1310_146263} {RNA815_62938} |
18. | MligTC455_35320 | 25 | 0.52 | Mlig455_002053 | Neo: - Age: - |
0.951 | - | - | - | - | - | 0.951 | Mlig455_002053 {REF} {Length: 1540} {RNA1310_43348} {RNA815_50885} |