TomoSeq data search

Data search

Results for MligTC455_51922

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_51922	191	3.98	Mlig455_002570, Mlig455_057902	Neo: - Age: logFC(26M/2M)=-0.606	SLC22A13	Mlig455_002570 {REF} {Length: 3494} {Pfam: Sugar (and other) transporter [PF00083.26, score=83.6]; Major Facilitator Superfamily [PF07690.18, score=75.9]; PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=18.7]} {Human: ENSG00000172940, SLC22A13, solute carrier family 22 member 13, [Score=105, Expect=1e-23]} {Mouse: ENSMUSG00000063652, Slc22a21, solute carrier family 22 (organic cation transporter), member 21, [Score=100, Expect=4e-22]; ENSMUSG00000074028, Slc22a13, solute carrier family 22 (organic cation transporter), member 13, [Score=99.8, Expect=9e-22]; ENSMUSG00000067144, Slc22a7, solute carrier family 22 (organic anion transporter), member 7, [Score=99.0, Expect=1e-21]; ENSMUSG00000018900, Slc22a5, solute carrier family 22 (organic cation transporter), member 5, [Score=95.1, Expect=3e-20]} {Dmel: FBgn0019952, Orct, Organic cation transporter, [Score=75.9, Expect=3e-14]} {Celegans: WBGene00019408, K05F1.6, [Score=63.9, Expect=2e-10]} {Smed: dd_Smed_v6_10826_0_2, dd_Smed_v6_10826_0_2, [Score=87.8, Expect=3e-18]} {RNA1509_56872} {RNA1310_6981.1, RNA1509_56872} {RNA1509_56872, RNA815_50196} Mlig455_057902 {REF} {Length: 2773} {Pfam: Sugar (and other) transporter [PF00083.26, score=84.0]; Major Facilitator Superfamily [PF07690.18, score=77.3]; PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=18.6]} {Human: ENSG00000172940, SLC22A13, solute carrier family 22 member 13, [Score=105, Expect=1e-23]} {Mouse: ENSMUSG00000063652, Slc22a21, solute carrier family 22 (organic cation transporter), member 21, [Score=101, Expect=3e-22]; ENSMUSG00000074028, Slc22a13, solute carrier family 22 (organic cation transporter), member 13, [Score=99.8, Expect=9e-22]; ENSMUSG00000067144, Slc22a7, solute carrier family 22 (organic anion transporter), member 7, [Score=99.4, Expect=1e-21]} {Dmel: FBgn0019952, Orct, Organic cation transporter, [Score=75.9, Expect=3e-14]} {Celegans: WBGene00019408, K05F1.6, [Score=63.9, Expect=1e-10]} {Smed: dd_Smed_v6_10826_0_2, dd_Smed_v6_10826_0_2, [Score=88.2, Expect=2e-18]} {RNA1509_56872} {RNA1310_6981.1} {RNA815_29772.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_51922

191

3.98

Mlig455_002570, Mlig455_057902

Neo: -

Age: logFC(26M/2M)=-0.606

SLC22A13

Mlig455_002570 {REF} {Length: 3494} {Pfam: Sugar (and other) transporter [PF00083.26, score=83.6]; Major Facilitator Superfamily [PF07690.18, score=75.9]; PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=18.7]} {Human: ENSG00000172940, SLC22A13, solute carrier family 22 member 13, [Score=105, Expect=1e-23]} {Mouse: ENSMUSG00000063652, Slc22a21, solute carrier family 22 (organic cation transporter), member 21, [Score=100, Expect=4e-22]; ENSMUSG00000074028, Slc22a13, solute carrier family 22 (organic cation transporter), member 13, [Score=99.8, Expect=9e-22]; ENSMUSG00000067144, Slc22a7, solute carrier family 22 (organic anion transporter), member 7, [Score=99.0, Expect=1e-21]; ENSMUSG00000018900, Slc22a5, solute carrier family 22 (organic cation transporter), member 5, [Score=95.1, Expect=3e-20]} {Dmel: FBgn0019952, Orct, Organic cation transporter, [Score=75.9, Expect=3e-14]} {Celegans: WBGene00019408, K05F1.6, [Score=63.9, Expect=2e-10]} {Smed: dd_Smed_v6_10826_0_2, dd_Smed_v6_10826_0_2, [Score=87.8, Expect=3e-18]} {RNA1509_56872} {RNA1310_6981.1, RNA1509_56872} {RNA1509_56872, RNA815_50196}

Mlig455_057902 {REF} {Length: 2773} {Pfam: Sugar (and other) transporter [PF00083.26, score=84.0]; Major Facilitator Superfamily [PF07690.18, score=77.3]; PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=18.6]} {Human: ENSG00000172940, SLC22A13, solute carrier family 22 member 13, [Score=105, Expect=1e-23]} {Mouse: ENSMUSG00000063652, Slc22a21, solute carrier family 22 (organic cation transporter), member 21, [Score=101, Expect=3e-22]; ENSMUSG00000074028, Slc22a13, solute carrier family 22 (organic cation transporter), member 13, [Score=99.8, Expect=9e-22]; ENSMUSG00000067144, Slc22a7, solute carrier family 22 (organic anion transporter), member 7, [Score=99.4, Expect=1e-21]} {Dmel: FBgn0019952, Orct, Organic cation transporter, [Score=75.9, Expect=3e-14]} {Celegans: WBGene00019408, K05F1.6, [Score=63.9, Expect=1e-10]} {Smed: dd_Smed_v6_10826_0_2, dd_Smed_v6_10826_0_2, [Score=88.2, Expect=2e-18]} {RNA1509_56872} {RNA1310_6981.1} {RNA815_29772.1}

Cumulative graph for MligTC455_51922

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.433	2.704	0.99978	1.00000
RegionR2	1.801	2.704	0.15449	0.49171
RegionR3	1.371	2.704	0.19569	0.73366
RegionR4	1.316	2.704	0.28001	0.58749
RegionR5	0.277	2.704	0.65708	1.00000
RegionR6	0.65	2.704	0.52329	1.00000
RegionR7	1.541	2.704	0.22090	0.84227
RegionR8	-4.524	2.704	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-2.917	2.704	0.99981	1.00000
RegenerationR2	-1.314	2.704	0.01591	0.20753
RegenerationR3	-1.372	2.704	0.04346	0.36444
RegenerationR4	-1.37	2.704	0.08142	0.45148
RegenerationR5	-0.698	2.704	0.28551	0.71392
RegenerationR6	-0.306	2.704	0.63828	0.89208
RegenerationBL	1.804	2.704	0.20448	0.54511
RegenerationTP	-0.837	2.704	0.88642	1.00000

Genes with expression patterns similar to MligTC455_51922

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_51922	191	3.98	Mlig455_002570, Mlig455_057902	Neo: - Age: logFC(26M/2M)=-0.606	SLC22A13	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_002570 {REF} {Length: 3494} {Pfam: Sugar (and other) transporter [PF00083.26, score=83.6]; Major Facilitator Superfamily [PF07690.18, score=75.9]; PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=18.7]} {Human: ENSG00000172940, SLC22A13, solute carrier family 22 member 13, [Score=105, Expect=1e-23]} {Mouse: ENSMUSG00000063652, Slc22a21, solute carrier family 22 (organic cation transporter), member 21, [Score=100, Expect=4e-22]; ENSMUSG00000074028, Slc22a13, solute carrier family 22 (organic cation transporter), member 13, [Score=99.8, Expect=9e-22]; ENSMUSG00000067144, Slc22a7, solute carrier family 22 (organic anion transporter), member 7, [Score=99.0, Expect=1e-21]; ENSMUSG00000018900, Slc22a5, solute carrier family 22 (organic cation transporter), member 5, [Score=95.1, Expect=3e-20]} {Dmel: FBgn0019952, Orct, Organic cation transporter, [Score=75.9, Expect=3e-14]} {Celegans: WBGene00019408, K05F1.6, [Score=63.9, Expect=2e-10]} {Smed: dd_Smed_v6_10826_0_2, dd_Smed_v6_10826_0_2, [Score=87.8, Expect=3e-18]} {RNA1509_56872} {RNA1310_6981.1, RNA1509_56872} {RNA1509_56872, RNA815_50196} Mlig455_057902 {REF} {Length: 2773} {Pfam: Sugar (and other) transporter [PF00083.26, score=84.0]; Major Facilitator Superfamily [PF07690.18, score=77.3]; PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=18.6]} {Human: ENSG00000172940, SLC22A13, solute carrier family 22 member 13, [Score=105, Expect=1e-23]} {Mouse: ENSMUSG00000063652, Slc22a21, solute carrier family 22 (organic cation transporter), member 21, [Score=101, Expect=3e-22]; ENSMUSG00000074028, Slc22a13, solute carrier family 22 (organic cation transporter), member 13, [Score=99.8, Expect=9e-22]; ENSMUSG00000067144, Slc22a7, solute carrier family 22 (organic anion transporter), member 7, [Score=99.4, Expect=1e-21]} {Dmel: FBgn0019952, Orct, Organic cation transporter, [Score=75.9, Expect=3e-14]} {Celegans: WBGene00019408, K05F1.6, [Score=63.9, Expect=1e-10]} {Smed: dd_Smed_v6_10826_0_2, dd_Smed_v6_10826_0_2, [Score=88.2, Expect=2e-18]} {RNA1509_56872} {RNA1310_6981.1} {RNA815_29772.1}
2.	MligTC455_00647	76	1.58	Mlig455_032515	Neo: - Age: -		0.979	-	-	-	0.979	-	-	Mlig455_032515 {REF} {Length: 35} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_52118}
3.	MligTC455_16529	416	8.68	Mlig455_042969, Mlig455_065311	Neo: - Age: Up-Down-Down	MADD	0.974	-	-	0.974	-	-	-	Mlig455_042969 {REF} {Length: 8278} {TRANSSPLICED} {Pfam: DENN (AEX-3) domain [PF02141.23, score=108.2]; uDENN domain [PF03456.20, score=52.3]} {Human: ENSG00000110514, MADD, MAP kinase activating death domain, [RH, Score=1040, Expect=0.0]} {Mouse: ENSMUSG00000040687, Madd, MAP-kinase activating death domain, [Score=1046, Expect=0.0]} {Dmel: FBgn0030613, Rab3-GEF, Rab3 GDP-GTP exchange factor, [RH, Score=499, Expect=9e-147]} {Celegans: WBGene00000086, aex-3, MAP kinase-activating death domain protein, [RH, Score=523, Expect=6e-160]} {Smed: dd_Smed_v6_8355_0_9, dd_Smed_v6_8355_0_9, [Score=1172, Expect=0.0]} {RNA1509_32942} {RNA1310_808.3} {RNA815_6761.1} Mlig455_065311 {REF} {Length: 6827} {TRANSSPLICED} {Pfam: DENN (AEX-3) domain [PF02141.23, score=108.1]; uDENN domain [PF03456.20, score=52.1]} {Human: ENSG00000110514, MADD, MAP kinase activating death domain, [Score=711, Expect=0.0]} {Mouse: ENSMUSG00000040687, Madd, MAP-kinase activating death domain, [Score=711, Expect=0.0]} {Dmel: FBgn0030613, Rab3-GEF, Rab3 GDP-GTP exchange factor, [RH, Score=499, Expect=2e-146]} {Celegans: WBGene00000086, aex-3, MAP kinase-activating death domain protein, [RH, Score=525, Expect=9e-160]} {Smed: dd_Smed_v6_8355_0_15, dd_Smed_v6_8355_0_15, [RH, Score=811, Expect=0.0]} {RNA1509_32942} {RNA1310_808.3} {RNA815_8678}
4.	MligTC455_39697	222	4.62	Mlig455_012028, Mlig455_022535, Mlig455_022573, Mlig455_022577, Mlig455_063682	Neo: - Age: logFC(26M/2M)=0.427		0.956	-	-	0.956	-	-	-	Mlig455_012028 {REF} {Length: 225} {NoTransDecoderORF} Mlig455_022535 {REF} {Length: 2190} {RNA1509_5734} {RNA1310_24264} {RNA815_19767} Mlig455_022573 {REF} {Length: 2314} {RNA1310_24264} {RNA815_19767} Mlig455_022577 {REF} {Length: 2706} {RNA1509_5734} {RNA1310_24264} {RNA815_19767} Mlig455_063682 {REF} {Length: 1870} {RNA1310_24264} {RNA815_19767}
5.	MligTC455_50734	175	3.66	Mlig455_044294	Neo: - Age: Down-Up-Up Region-enriched R2: 4.054/0.00263 Region-enriched R3: 3.364/0.00377	CHRNA3	0.956	-	-	0.956	-	-	-	Mlig455_044294 {REF} {Length: 1830} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=242.4]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=225.5]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=373, Expect=1e-123]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=365, Expect=1e-120]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=360, Expect=9e-119]; ENSG00000117971, CHRNB4, cholinergic receptor nicotinic beta 4 subunit, [Score=358, Expect=6e-118]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=376, Expect=3e-125]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=374, Expect=4e-124]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=450, Expect=4e-154]} {Celegans: WBGene00006797, unc-63, Acetylcholine receptor subunit alpha-type unc-63, [Score=381, Expect=2e-127]} {Smed: dd_Smed_v6_9799_0_1, dd_Smed_v6_9799_0_1, [RH, Score=651, Expect=0.0]} {RNA1509_45903} {RNA1310_14580} {RNA815_10044.1}
6.	MligTC455_31012	19	0.4	Mlig455_028966	Neo: - Age: -		0.955	-	-	-	0.955	-	-	Mlig455_028966 {REF} {Length: 2007} {RNA1509_4697} {RNA1310_228} {RNA815_19009}