M. lignano Tomo-Seq
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Results for MligTC455_51948

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_51948 153 3.19 Mlig455_035203, Mlig455_035251

Neo: -

Age: -

Mlig455_035203 {REF} {Length: 1638} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=34.0]; Prokaryotic RING finger family 4 [PF14447.8, score=19.3]} {RNA1509_23704} {RNA1310_6645.2} {RNA815_14460}

Mlig455_035251 {REF} {Length: 1463} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=34.1]; Prokaryotic RING finger family 4 [PF14447.8, score=19.4]} {RNA1509_23704} {RNA1310_6645.2} {RNA815_14460}

Cumulative graph for MligTC455_51948

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.287 2.46 0.24841 0.89450
RegionR2 0.406 2.46 0.68307 1.00000
RegionR3 -0.463 2.46 0.95266 1.00000
RegionR4 1.04 2.46 0.29524 0.60677
RegionR5 1.123 2.46 0.17548 0.44873
RegionR6 0.781 2.46 0.41666 0.98509
RegionR7 1.135 2.46 0.29210 0.92646
RegionR8 1.265 2.46 0.30806 0.94024

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.429 2.46 0.99996 1.00000
RegenerationR2 -0.251 2.46 0.68010 0.94903
RegenerationR3 0.399 2.46 0.58932 0.90346
RegenerationR4 -0.47 2.46 0.47702 0.85710
RegenerationR5 -0.488 2.46 0.40632 0.80319
RegenerationR6 -0.165 2.46 0.80881 0.98212
RegenerationBL -1.895 2.46 0.06475 0.29603
RegenerationTP -1.642 2.46 0.11298 0.51625


Genes with expression patterns similar to MligTC455_51948

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_51948 153 3.19 Mlig455_035203, Mlig455_035251

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_035203 {REF} {Length: 1638} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=34.0]; Prokaryotic RING finger family 4 [PF14447.8, score=19.3]} {RNA1509_23704} {RNA1310_6645.2} {RNA815_14460}

Mlig455_035251 {REF} {Length: 1463} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=34.1]; Prokaryotic RING finger family 4 [PF14447.8, score=19.4]} {RNA1509_23704} {RNA1310_6645.2} {RNA815_14460}
2. MligTC455_52316 171 3.56 Mlig455_067015

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.457

Region-specific R4: 3.311

 0.962 - - - - - 0.962 Mlig455_067015 {REF} {Length: 2114} {RNA1509_16174} {RNA1310_11902.1} {RNA815_13985}

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