TomoSeq data search

Data search

Results for MligTC455_51964

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_51964

5417

112.85

Mlig455_058262

Neo: -

Age: Up-Down-Up

Regeneration-enriched R5: 1.679
Regeneration-enriched R4: 1.482
Regeneration-enriched R6: 1.345

Mlig455_058262 {REF} {Length: 2278} {Pfam: Innexin [PF00876.20, score=112.5]; Potassium channel Kv1.4 tandem inactivation domain [PF07941.13, score=22.9]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=50.4, Expect=4e-07]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=99.8, Expect=5e-24]} {Smed: dd_Smed_v6_1234_0_1, dd_Smed_v6_1234_0_1, [Score=144, Expect=2e-40]} {RNA1509_1788} {RNA1310_9401} {RNA815_2627}

Cumulative graph for MligTC455_51964

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.78	6.918	0.20551	0.84402
RegionR2	0.652	6.918	0.03435	0.21241
RegionR3	0.337	6.918	0.20258	0.74287
RegionR4	-0.61	6.918	0.06277	0.22496
RegionR5	-0.958	6.918	0.00057	0.00656
RegionR6	0.264	6.918	0.32468	0.91365
RegionR7	0.545	6.918	0.06632	0.49515
RegionR8	0.551	6.918	0.11251	0.62083

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.906	6.918	0.22539	0.95604
RegenerationR2	0.468	6.918	0.12745	0.55161
RegenerationR3	0.633	6.918	0.04904	0.38517
RegenerationR4	1.482	6.918	0.00001	0.00161
RegenerationR5	1.679	6.918	0.00000	0.00026
RegenerationR6	1.345	6.918	0.00004	0.00463
RegenerationBL	0.253	6.918	0.40629	0.77569
RegenerationTP	1.168	6.918	0.00026	0.02137

Genes with expression patterns similar to MligTC455_51964

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_51964	5417	112.85	Mlig455_058262	Neo: - Age: Up-Down-Up Regeneration-enriched R5: 1.679 Regeneration-enriched R4: 1.482 Regeneration-enriched R6: 1.345		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_058262 {REF} {Length: 2278} {Pfam: Innexin [PF00876.20, score=112.5]; Potassium channel Kv1.4 tandem inactivation domain [PF07941.13, score=22.9]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=50.4, Expect=4e-07]} {Celegans: WBGene00002123, inx-1, Innexin, [Score=99.8, Expect=5e-24]} {Smed: dd_Smed_v6_1234_0_1, dd_Smed_v6_1234_0_1, [Score=144, Expect=2e-40]} {RNA1509_1788} {RNA1310_9401} {RNA815_2627}
2.	MligTC455_51965	10635	221.56	Mlig455_058279, Mlig455_070788	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.377		5.97	0.998	0.996	0.986	0.999	0.992	0.999	Mlig455_058279 {REF} {Length: 2757} {Pfam: Innexin [PF00876.20, score=315.4]; Potassium channel Kv1.4 tandem inactivation domain [PF07941.13, score=20.6]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=100, Expect=1e-22]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [Score=222, Expect=6e-67]} {Smed: dd_Smed_v6_8019_0_1, dd_Smed_v6_8019_0_1, [RH, Score=371, Expect=7e-124]} {RNA1509_17123, RNA1509_1788, RNA1509_31412, RNA1509_33934, RNA1509_39362, RNA1509_49345} {RNA1310_9401, RNA1509_17123, RNA1509_31412, RNA1509_33934, RNA1509_39362, RNA1509_49345} {RNA1509_17123, RNA1509_31412, RNA1509_33934, RNA1509_39362, RNA1509_49345, RNA815_2627} Mlig455_070788 {REF} {Length: 2644} {Pfam: Innexin [PF00876.20, score=315.4]; Potassium channel Kv1.4 tandem inactivation domain [PF07941.13, score=20.9]} {Dmel: FBgn0265274, Inx3, Innexin 3, [Score=100, Expect=1e-22]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [Score=222, Expect=4e-67]} {Smed: dd_Smed_v6_8019_0_1, dd_Smed_v6_8019_0_1, [RH, Score=371, Expect=1e-123]} {RNA1509_1788, RNA1509_19935} {RNA1310_9401, RNA1509_1788, RNA1509_19935} {RNA1509_1788, RNA1509_19935, RNA815_2627}
3.	MligTC455_27717	2460	51.24	Mlig455_034360	Neo: - Age: Up-Up-Up, logFC(26M/2M)=0.825	ACTG1	1.698	0.733	-	-	-	0.965	-	Mlig455_034360 {REF} {Length: 1754} {Pfam: Actin [PF00022.21, score=499.7]} {Human: ENSG00000184009, ACTG1, actin gamma 1, [RH, Score=769, Expect=0.0]; ENSG00000075624, ACTB, actin beta, [RH, Score=769, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [RH, Score=746, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [RH, Score=745, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [RH, Score=744, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [RH, Score=741, Expect=0.0]; ENSG00000169067, ACTBL2, actin, beta like 2, [RH, Score=733, Expect=0.0]} {Mouse: ENSMUSG00000029580, Actb, actin, beta, [RH, Score=769, Expect=0.0]; ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [RH, Score=769, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [RH, Score=746, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [RH, Score=745, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [RH, Score=744, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [RH, Score=741, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [RH, Score=739, Expect=0.0]} {Dmel: FBgn0000042, Act5C, Actin 5C, [RH, Score=770, Expect=0.0]} {Celegans: WBGene00000066, act-4, Actin-4, [RH, Score=769, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [RH, Score=759, Expect=0.0]} {RNA1509_819} {RNA1310_20267.2} {RNA815_4929.3}
4.	MligTC455_23998	267	5.57	Mlig455_041316, Mlig455_068432	Neo: - Age: -		0.963	-	-	-	0.963	-	-	Mlig455_041316 {REF} {Length: 1069} {TRANSSPLICED} {RNA1310_40771} {RNA815_15267} Mlig455_068432 {REF} {Length: 875} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_40771} {RNA815_15267}
5.	MligTC455_53627	1053	21.95	Mlig455_033978, Mlig455_056722	Neo: - Age: -	SLIT1	0.961	-	-	-	-	-	0.961	Mlig455_033978 {REF} {Length: 2051} {Pfam: Leucine rich repeat [PF13855.8, score=61.1]} {Human: ENSG00000187122, SLIT1, slit guidance ligand 1, [Score=50.1, Expect=7e-06]} {Mouse: ENSMUSG00000025020, Slit1, slit guidance ligand 1, [Score=50.8, Expect=3e-06]} {Dmel: FBgn0264089, sli, slit, [Score=52.8, Expect=5e-07]} {RNA1509_49012} {RNA1310_15910.1} {RNA815_6013} Mlig455_056722 {REF} {Length: 1986} {Pfam: Leucine rich repeat [PF13855.8, score=60.1]} {Human: ENSG00000187122, SLIT1, slit guidance ligand 1, [Score=50.4, Expect=6e-06]} {Mouse: ENSMUSG00000025020, Slit1, slit guidance ligand 1, [Score=50.8, Expect=3e-06]} {Dmel: FBgn0264089, sli, slit, [Score=53.1, Expect=4e-07]} {RNA1509_49012} {RNA1310_15910.1} {RNA815_6013}

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