TomoSeq data search

Data search

Results for MligTC455_52044

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_52044	1266	26.37	Mlig455_010633	Neo: Int S/G2/M Age: logFC(26M/2M)=0.286	ELP4	Mlig455_010633 {REF} {Length: 1557} {TRANSSPLICED} {Pfam: PAXNEB protein [PF05625.13, score=210.5]} {Human: ENSG00000109911, ELP4, elongator acetyltransferase complex subunit 4, [RH, Score=137, Expect=1e-35]} {Mouse: ENSMUSG00000027167, Elp4, elongator acetyltransferase complex subunit 4, [RH, Score=142, Expect=6e-38]} {Dmel: FBgn0031711, CG6907, [RH, Score=81.3, Expect=2e-16]} {Celegans: WBGene00016128, elpc-4, Putative elongator complex protein 4, [RH, Score=58.2, Expect=3e-09]} {RNA1509_12391} {RNA1310_23905.1, RNA1509_12391} {RNA1509_12391, RNA815_6946}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_52044

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.657	4.895	0.48115	1.00000
RegionR2	0.158	4.895	0.71578	1.00000
RegionR3	-0.298	4.895	0.41263	0.93847
RegionR4	0.94	4.895	0.01653	0.08884
RegionR5	0.405	4.895	0.20112	0.49190
RegionR6	-0.286	4.895	0.44064	1.00000
RegionR7	-0.005	4.895	0.99115	1.00000
RegionR8	-0.257	4.895	0.65944	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.081	4.895	0.95185	1.00000
RegenerationR2	0.401	4.895	0.28473	0.72783
RegenerationR3	0.724	4.895	0.08450	0.47489
RegenerationR4	-0.035	4.895	0.93145	1.00000
RegenerationR5	0.504	4.895	0.17479	0.60402
RegenerationR6	0.745	4.895	0.07557	0.34354
RegenerationBL	1.068	4.895	0.01180	0.11091
RegenerationTP	0.349	4.895	0.48917	0.89485

Genes with expression patterns similar to MligTC455_52044

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_52044	1266	26.37	Mlig455_010633	Neo: Int S/G2/M Age: logFC(26M/2M)=0.286	ELP4	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_010633 {REF} {Length: 1557} {TRANSSPLICED} {Pfam: PAXNEB protein [PF05625.13, score=210.5]} {Human: ENSG00000109911, ELP4, elongator acetyltransferase complex subunit 4, [RH, Score=137, Expect=1e-35]} {Mouse: ENSMUSG00000027167, Elp4, elongator acetyltransferase complex subunit 4, [RH, Score=142, Expect=6e-38]} {Dmel: FBgn0031711, CG6907, [RH, Score=81.3, Expect=2e-16]} {Celegans: WBGene00016128, elpc-4, Putative elongator complex protein 4, [RH, Score=58.2, Expect=3e-09]} {RNA1509_12391} {RNA1310_23905.1, RNA1509_12391} {RNA1509_12391, RNA815_6946}
2.	MligTC455_51593	6854	142.79	Mlig455_051130, Mlig455_051206	Neo: - Age: -	HSPA9	0.953	-	-	-	0.953	-	-	Mlig455_051130 {REF} {Length: 3226} {Pfam: Hsp70 protein [PF00012.22, score=813.4]; MreB/Mbl protein [PF06723.15, score=31.7]} {Human: ENSG00000113013, HSPA9, heat shock protein family A (Hsp70) member 9, [Score=1009, Expect=0.0]} {Mouse: ENSMUSG00000024359, Hspa9, heat shock protein 9, [Score=1008, Expect=0.0]} {Dmel: FBgn0001220, Hsc70-5, Heat shock protein cognate 5, [Score=982, Expect=0.0]} {Celegans: WBGene00002010, hsp-6, Heat shock 70 kDa protein F, mitochondrial, [Score=941, Expect=0.0]} {Smed: dd_Smed_v6_424_0_1, dd_Smed_v6_424_0_1, [Score=999, Expect=0.0]} {RNA1509_139} {RNA1310_6572} {RNA815_1992} Mlig455_051206 {REF} {Length: 2867} {Pfam: Hsp70 protein [PF00012.22, score=894.1]; MreB/Mbl protein [PF06723.15, score=58.1]; Cell division protein FtsA [PF14450.8, score=21.2]} {Human: ENSG00000113013, HSPA9, heat shock protein family A (Hsp70) member 9, [RH, Score=1075, Expect=0.0]} {Mouse: ENSMUSG00000024359, Hspa9, heat shock protein 9, [RH, Score=1074, Expect=0.0]} {Dmel: FBgn0001220, Hsc70-5, Heat shock protein cognate 5, [RH, Score=1050, Expect=0.0]} {Celegans: WBGene00002010, hsp-6, Heat shock 70 kDa protein F, mitochondrial, [RH, Score=1007, Expect=0.0]} {Smed: dd_Smed_v6_424_0_1, dd_Smed_v6_424_0_1, [RH, Score=1066, Expect=0.0]} {RNA1509_139, RNA1509_17381} {RNA1310_6572, RNA1509_139, RNA1509_17381} {RNA1509_139, RNA1509_17381, RNA815_1992}
3.	MligTC455_44496	2740	57.09	Mlig455_040772, Mlig455_064606	Neo: - Age: -	XRN1	0.95	-	-	-	-	-	0.950	Mlig455_040772 {REF} {Length: 5076} {Pfam: XRN 5'-3' exonuclease N-terminus [PF03159.20, score=315.1]; Xrn1 helical domain [PF17846.3, score=283.0]; Exoribonuclease Xrn1 D1 domain [PF18332.3, score=69.4]; Xrn1 SH3-like domain [PF18129.3, score=27.6]} {Human: ENSG00000114127, XRN1, 5'-3' exoribonuclease 1, [RH, Score=923, Expect=0.0]} {Mouse: ENSMUSG00000032410, Xrn1, 5'-3' exoribonuclease 1, [RH, Score=923, Expect=0.0]} {Dmel: FBgn0020261, pcm, pacman, [RH, Score=793, Expect=0.0]} {Celegans: WBGene00012730, xrn-1, 5'-3' exoribonuclease 1, [RH, Score=495, Expect=3e-149]} {Smed: dd_Smed_v6_3662_0_1, dd_Smed_v6_3662_0_1, [RH, Score=524, Expect=2e-160]} {RNA1509_29533, RNA1509_3787, RNA1509_47557} {RNA1310_1182, RNA1509_29533, RNA1509_3787, RNA1509_47557} {RNA1509_29533, RNA1509_3787, RNA1509_47557, RNA815_2742} Mlig455_064606 {REF} {Length: 5036} {Pfam: XRN 5'-3' exonuclease N-terminus [PF03159.20, score=315.2]; Xrn1 helical domain [PF17846.3, score=283.2]; Exoribonuclease Xrn1 D1 domain [PF18332.3, score=72.6]; Xrn1 SH3-like domain [PF18129.3, score=27.6]} {Human: ENSG00000114127, XRN1, 5'-3' exoribonuclease 1, [RH, Score=924, Expect=0.0]} {Mouse: ENSMUSG00000032410, Xrn1, 5'-3' exoribonuclease 1, [RH, Score=925, Expect=0.0]} {Dmel: FBgn0020261, pcm, pacman, [RH, Score=792, Expect=0.0]} {Celegans: WBGene00012730, xrn-1, 5'-3' exoribonuclease 1, [Score=494, Expect=4e-149]} {Smed: dd_Smed_v6_3662_0_1, dd_Smed_v6_3662_0_1, [RH, Score=523, Expect=4e-160]} {RNA1509_31976} {RNA1310_1182, RNA1509_31976} {RNA1509_31976, RNA815_2742}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_52044

1266

26.37

Mlig455_010633

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.286

ELP4

1.000

MligTC455_51593

6854

142.79

Mlig455_051130, Mlig455_051206

Neo: -

Age: -

HSPA9

0.953

Mlig455_051130 {REF} {Length: 3226} {Pfam: Hsp70 protein [PF00012.22, score=813.4]; MreB/Mbl protein [PF06723.15, score=31.7]} {Human: ENSG00000113013, HSPA9, heat shock protein family A (Hsp70) member 9, [Score=1009, Expect=0.0]} {Mouse: ENSMUSG00000024359, Hspa9, heat shock protein 9, [Score=1008, Expect=0.0]} {Dmel: FBgn0001220, Hsc70-5, Heat shock protein cognate 5, [Score=982, Expect=0.0]} {Celegans: WBGene00002010, hsp-6, Heat shock 70 kDa protein F, mitochondrial, [Score=941, Expect=0.0]} {Smed: dd_Smed_v6_424_0_1, dd_Smed_v6_424_0_1, [Score=999, Expect=0.0]} {RNA1509_139} {RNA1310_6572} {RNA815_1992}

Mlig455_051206 {REF} {Length: 2867} {Pfam: Hsp70 protein [PF00012.22, score=894.1]; MreB/Mbl protein [PF06723.15, score=58.1]; Cell division protein FtsA [PF14450.8, score=21.2]} {Human: ENSG00000113013, HSPA9, heat shock protein family A (Hsp70) member 9, [RH, Score=1075, Expect=0.0]} {Mouse: ENSMUSG00000024359, Hspa9, heat shock protein 9, [RH, Score=1074, Expect=0.0]} {Dmel: FBgn0001220, Hsc70-5, Heat shock protein cognate 5, [RH, Score=1050, Expect=0.0]} {Celegans: WBGene00002010, hsp-6, Heat shock 70 kDa protein F, mitochondrial, [RH, Score=1007, Expect=0.0]} {Smed: dd_Smed_v6_424_0_1, dd_Smed_v6_424_0_1, [RH, Score=1066, Expect=0.0]} {RNA1509_139, RNA1509_17381} {RNA1310_6572, RNA1509_139, RNA1509_17381} {RNA1509_139, RNA1509_17381, RNA815_1992}

MligTC455_44496

2740

57.09

Mlig455_040772, Mlig455_064606

Neo: -

Age: -

XRN1

0.95

0.950

Mlig455_040772 {REF} {Length: 5076} {Pfam: XRN 5'-3' exonuclease N-terminus [PF03159.20, score=315.1]; Xrn1 helical domain [PF17846.3, score=283.0]; Exoribonuclease Xrn1 D1 domain [PF18332.3, score=69.4]; Xrn1 SH3-like domain [PF18129.3, score=27.6]} {Human: ENSG00000114127, XRN1, 5'-3' exoribonuclease 1, [RH, Score=923, Expect=0.0]} {Mouse: ENSMUSG00000032410, Xrn1, 5'-3' exoribonuclease 1, [RH, Score=923, Expect=0.0]} {Dmel: FBgn0020261, pcm, pacman, [RH, Score=793, Expect=0.0]} {Celegans: WBGene00012730, xrn-1, 5'-3' exoribonuclease 1, [RH, Score=495, Expect=3e-149]} {Smed: dd_Smed_v6_3662_0_1, dd_Smed_v6_3662_0_1, [RH, Score=524, Expect=2e-160]} {RNA1509_29533, RNA1509_3787, RNA1509_47557} {RNA1310_1182, RNA1509_29533, RNA1509_3787, RNA1509_47557} {RNA1509_29533, RNA1509_3787, RNA1509_47557, RNA815_2742}

Mlig455_064606 {REF} {Length: 5036} {Pfam: XRN 5'-3' exonuclease N-terminus [PF03159.20, score=315.2]; Xrn1 helical domain [PF17846.3, score=283.2]; Exoribonuclease Xrn1 D1 domain [PF18332.3, score=72.6]; Xrn1 SH3-like domain [PF18129.3, score=27.6]} {Human: ENSG00000114127, XRN1, 5'-3' exoribonuclease 1, [RH, Score=924, Expect=0.0]} {Mouse: ENSMUSG00000032410, Xrn1, 5'-3' exoribonuclease 1, [RH, Score=925, Expect=0.0]} {Dmel: FBgn0020261, pcm, pacman, [RH, Score=792, Expect=0.0]} {Celegans: WBGene00012730, xrn-1, 5'-3' exoribonuclease 1, [Score=494, Expect=4e-149]} {Smed: dd_Smed_v6_3662_0_1, dd_Smed_v6_3662_0_1, [RH, Score=523, Expect=4e-160]} {RNA1509_31976} {RNA1310_1182, RNA1509_31976} {RNA1509_31976, RNA815_2742}