TomoSeq data search

Data search

Results for MligTC455_52072

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_52072

808

16.84

Mlig455_021260

Neo: Int S/G2/M

Age: Down-Down-Up

EBNA1BP2

Mlig455_021260 {REF} {Length: 1652} {TRANSSPLICED} {Pfam: Eukaryotic rRNA processing protein EBP2 [PF05890.14, score=228.6]} {Human: ENSG00000117395, EBNA1BP2, EBNA1 binding protein 2, [RH, Score=145, Expect=7e-41]} {Mouse: ENSMUSG00000028729, Ebna1bp2, EBNA1 binding protein 2, [RH, Score=149, Expect=2e-42]} {Dmel: FBgn0039828, CG1542, [RH, Score=114, Expect=2e-29]} {Celegans: WBGene00015941, C18A3.3, Probable rRNA-processing protein EBP2 homolog, [RH, Score=113, Expect=1e-28]} {Smed: dd_Smed_v6_5945_0_1, dd_Smed_v6_5945_0_1, [RH, Score=99.0, Expect=2e-24]} {RNA1509_36264} {RNA1310_18974} {RNA815_15170}

Cumulative graph for MligTC455_52072

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.669	4.325	0.53775	1.00000
RegionR2	-0.856	4.325	0.08863	0.36529
RegionR3	0.026	4.325	0.94704	1.00000
RegionR4	0.76	4.325	0.09553	0.29822
RegionR5	0.65	4.325	0.07588	0.25207
RegionR6	0.461	4.325	0.24653	0.83191
RegionR7	0.732	4.325	0.11377	0.63946
RegionR8	-1.104	4.325	0.12754	0.65673

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.914	4.325	0.59962	1.00000
RegenerationR2	0.635	4.325	0.13905	0.56830
RegenerationR3	0.669	4.325	0.13717	0.56251
RegenerationR4	0.931	4.325	0.03985	0.32213
RegenerationR5	0.173	4.325	0.67929	0.94390
RegenerationR6	0.798	4.325	0.06807	0.32695
RegenerationBL	-0.408	4.325	0.47453	0.84060
RegenerationTP	0.522	4.325	0.36544	0.80407

Genes with expression patterns similar to MligTC455_52072

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_52072	808	16.84	Mlig455_021260	Neo: Int S/G2/M Age: Down-Down-Up	EBNA1BP2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_021260 {REF} {Length: 1652} {TRANSSPLICED} {Pfam: Eukaryotic rRNA processing protein EBP2 [PF05890.14, score=228.6]} {Human: ENSG00000117395, EBNA1BP2, EBNA1 binding protein 2, [RH, Score=145, Expect=7e-41]} {Mouse: ENSMUSG00000028729, Ebna1bp2, EBNA1 binding protein 2, [RH, Score=149, Expect=2e-42]} {Dmel: FBgn0039828, CG1542, [RH, Score=114, Expect=2e-29]} {Celegans: WBGene00015941, C18A3.3, Probable rRNA-processing protein EBP2 homolog, [RH, Score=113, Expect=1e-28]} {Smed: dd_Smed_v6_5945_0_1, dd_Smed_v6_5945_0_1, [RH, Score=99.0, Expect=2e-24]} {RNA1509_36264} {RNA1310_18974} {RNA815_15170}
2.	MligTC455_40776	712	14.84	Mlig455_000087	Neo: - Age: -		1.804	-	-	-	0.959	-	0.845	Mlig455_000087 {REF} {Length: 660} {NoTransDecoderORF} {RNA1509_37317, RNA1509_46432} {RNA1310_19375.2, RNA1509_46432} {RNA1509_46432, RNA815_7769}
3.	MligTC455_48283	909	18.94	Mlig455_026664	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.206 Region-enriched R4: 1.636/0.00109	VMP1	0.974	-	-	-	-	0.974	-	Mlig455_026664 {REF} {Length: 4250} {Pfam: SAP domain [PF02037.29, score=41.2]; SNARE associated Golgi protein [PF09335.13, score=32.6]; SAP domain-containing new25 [PF18953.2, score=19.7]} {Human: ENSG00000062716, VMP1, vacuole membrane protein 1, [RH, Score=381, Expect=4e-128]} {Mouse: ENSMUSG00000018171, Vmp1, vacuole membrane protein 1, [RH, Score=388, Expect=7e-131]} {Dmel: FBgn0052675, Tango5, Transport and Golgi organization 5, [RH, Score=378, Expect=2e-125]} {Celegans: WBGene00012559, epg-3, Ectopic P granules protein 3, [RH, Score=371, Expect=6e-124]} {Smed: dd_Smed_v6_1156_0_1, dd_Smed_v6_1156_0_1, [RH, Score=281, Expect=6e-90]} {RNA1509_21487, RNA1509_24070, RNA1509_40428, RNA1509_53125} {RNA1310_6077, RNA1509_21487, RNA1509_24070, RNA1509_40428, RNA1509_53125} {RNA1509_21487, RNA1509_24070, RNA1509_40428, RNA1509_53125, RNA815_1510}
4.	MligTC455_42380	920	19.17	Mlig455_003776	Neo: Irradiation Age: -		0.957	-	-	-	0.957	-	-	Mlig455_003776 {REF} {Length: 1193} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4743) [PF15916.7, score=74.0]; NUDIX domain [PF00293.30, score=43.7]} {Dmel: FBgn0039958, CG12567, [RH, Score=177, Expect=8e-53]} {Smed: dd_Smed_v6_11761_0_1, dd_Smed_v6_11761_0_1, [RH, Score=233, Expect=2e-75]} {RNA1509_22954} {RNA1310_24085} {RNA815_9482}
5.	MligTC455_36070	1777	37.03	Mlig455_021994	Neo: Int S/G2/M Age: -		0.956	-	-	-	0.956	-	-	Mlig455_021994 {REF} {Length: 5883} {RNA1509_1771, RNA1509_20806, RNA1509_2105, RNA1509_25464, RNA1509_32532, RNA1509_39722, RNA1509_47127, RNA1509_51538} {RNA1310_5110.1, RNA1509_1771, RNA1509_20806, RNA1509_2105, RNA1509_25464, RNA1509_32532, RNA1509_39722, RNA1509_47127, RNA1509_51538} {RNA1509_1771, RNA1509_20806, RNA1509_2105, RNA1509_25464, RNA1509_32532, RNA1509_39722, RNA1509_47127, RNA1509_51538, RNA815_2031.1}
6.	MligTC455_34529	1107	23.06	Mlig455_066803, Mlig455_066868	Neo: Int S/G2/M Age: logFC(26M/2M)=0.356 Region-specific R5: 3.151 Region-enriched R5: 2.892/0.00000	RAD9A	0.95	-	-	-	0.950	-	-	Mlig455_066803 {REF} {Length: 1685} {TRANSSPLICED} {Pfam: Rad9 [PF04139.15, score=161.0]} {Human: ENSG00000172613, RAD9A, RAD9 checkpoint clamp component A, [RH, Score=152, Expect=7e-41]} {Mouse: ENSMUSG00000097909, Rad9a, RAD9 checkpoint clamp component A, [RH, Score=154, Expect=5e-42]; ENSMUSG00000024824, Rad9a, RAD9 checkpoint clamp component A, [RH, Score=154, Expect=5e-42]} {Smed: dd_Smed_v6_14121_0_1, dd_Smed_v6_14121_0_1, [RH, Score=167, Expect=4e-47]} {RNA1509_21321, RNA1509_28522, RNA1509_29027} {RNA1310_15353.1, RNA1509_21321, RNA1509_28522, RNA1509_29027} {RNA1509_21321, RNA1509_28522, RNA1509_29027, RNA815_16837} Mlig455_066868 {REF} {Length: 1671} {TRANSSPLICED} {Pfam: Rad9 [PF04139.15, score=160.9]} {Human: ENSG00000172613, RAD9A, RAD9 checkpoint clamp component A, [RH, Score=153, Expect=2e-41]} {Mouse: ENSMUSG00000097909, Rad9a, RAD9 checkpoint clamp component A, [RH, Score=155, Expect=4e-42]; ENSMUSG00000024824, Rad9a, RAD9 checkpoint clamp component A, [RH, Score=155, Expect=4e-42]} {Smed: dd_Smed_v6_14121_0_1, dd_Smed_v6_14121_0_1, [RH, Score=167, Expect=4e-47]} {RNA1509_21321} {RNA1310_15353.1} {RNA815_16837}

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