Data search
Results for MligTC455_52089
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_52089 | 396 | 8.24 | Mlig455_019628 | Neo: Irradiation Age: - |
GCC1 | Mlig455_019628 {REF} {Length: 2916} {TRANSSPLICED} {Pfam: GRIP domain [PF01465.22, score=35.5]} {Human: ENSG00000179562, GCC1, GRIP and coiled-coil domain containing 1, [RH, Score=106, Expect=3e-23]} {Mouse: ENSMUSG00000029708, Gcc1, golgi coiled coil 1, [RH, Score=97.4, Expect=2e-20]} {Dmel: FBgn0037881, GCC88, GRIP and coiled-coil domain containing 88 kDa, [RH, Score=91.3, Expect=9e-19]} {Smed: dd_Smed_v6_6311_0_1, dd_Smed_v6_6311_0_1, [RH, Score=127, Expect=1e-30]} {RNA1509_16899} {RNA1310_11766, RNA1509_16899} {RNA1509_16899, RNA815_11039} |
Cumulative graph for MligTC455_52089
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.548 | 3.306 | 0.60586 | 1.00000 | |
| RegionR2 | -0.802 | 3.306 | 0.15880 | 0.49896 | |
| RegionR3 | -0.865 | 3.306 | 0.06187 | 0.43928 | |
| RegionR4 | 0.234 | 3.306 | 0.63284 | 0.94081 | |
| RegionR5 | 0.105 | 3.306 | 0.78590 | 1.00000 | |
| RegionR6 | -0.186 | 3.306 | 0.68201 | 1.00000 | |
| RegionR7 | 0.275 | 3.306 | 0.62552 | 1.00000 | |
| RegionR8 | 0.69 | 3.306 | 0.30100 | 0.93155 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.485 | 3.306 | 0.36956 | 1.00000 | |
| RegenerationR2 | 0.166 | 3.306 | 0.74290 | 0.97093 | |
| RegenerationR3 | 0.01 | 3.306 | 0.98606 | 1.00000 | |
| RegenerationR4 | -1.088 | 3.306 | 0.03456 | 0.30030 | |
| RegenerationR5 | -0.035 | 3.306 | 0.93854 | 1.00000 | |
| RegenerationR6 | -0.868 | 3.306 | 0.11631 | 0.41952 | |
| RegenerationBL | -0.631 | 3.306 | 0.30961 | 0.67502 | |
| RegenerationTP | -1.299 | 3.306 | 0.06901 | 0.42217 |
Genes with expression patterns similar to MligTC455_52089
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_52089 | 396 | 8.24 | Mlig455_019628 | Neo: Irradiation Age: - |
GCC1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_019628 {REF} {Length: 2916} {TRANSSPLICED} {Pfam: GRIP domain [PF01465.22, score=35.5]} {Human: ENSG00000179562, GCC1, GRIP and coiled-coil domain containing 1, [RH, Score=106, Expect=3e-23]} {Mouse: ENSMUSG00000029708, Gcc1, golgi coiled coil 1, [RH, Score=97.4, Expect=2e-20]} {Dmel: FBgn0037881, GCC88, GRIP and coiled-coil domain containing 88 kDa, [RH, Score=91.3, Expect=9e-19]} {Smed: dd_Smed_v6_6311_0_1, dd_Smed_v6_6311_0_1, [RH, Score=127, Expect=1e-30]} {RNA1509_16899} {RNA1310_11766, RNA1509_16899} {RNA1509_16899, RNA815_11039} |
| 2. | MligTC455_20628 | 439 | 9.14 | Mlig455_058160, Mlig455_058225, Mlig455_058231 | Neo: - Age: - |
0.958 | - | - | - | - | - | 0.958 | Mlig455_058160 {REF} {Length: 3431} {Pfam: Rhodopsin-like GPCR transmembrane domain [PF10192.11, score=98.7]} {Dmel: FBgn0034674, CG9304, [RH, Score=265, Expect=4e-81]} {Celegans: WBGene00011441, T04F8.2, [RH, Score=201, Expect=2e-58]} {RNA1509_19499} {RNA1310_13236.1} {RNA815_4665} Mlig455_058225 {REF} {Length: 2749} {TRANSSPLICED} {Pfam: Rhodopsin-like GPCR transmembrane domain [PF10192.11, score=98.7]} {Dmel: FBgn0034674, CG9304, [RH, Score=265, Expect=7e-81]} {Celegans: WBGene00011441, T04F8.2, [RH, Score=202, Expect=1e-58]} {RNA1509_19499} {RNA1310_13236.1, RNA1509_19499} {RNA1509_19499, RNA815_4665} Mlig455_058231 {REF} {Length: 2506} {TRANSSPLICED} {Pfam: Rhodopsin-like GPCR transmembrane domain [PF10192.11, score=98.7]} {Dmel: FBgn0034674, CG9304, [RH, Score=265, Expect=7e-81]} {Celegans: WBGene00011441, T04F8.2, [RH, Score=202, Expect=1e-58]} {RNA1509_19499} {RNA1310_13236.2} {RNA815_4665} |
|
| 3. | MligTC455_42436 | 440 | 9.17 | Mlig455_018859 | Neo: - Age: - |
VPS51 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_018859 {REF} {Length: 3001} {TRANSSPLICED} {Pfam: Vps51/Vps67 [PF08700.13, score=91.6]; Exocyst complex component Sec5 [PF15469.8, score=79.8]; Dor1-like family [PF04124.14, score=46.6]; COG (conserved oligomeric Golgi) complex component, COG2 [PF06148.13, score=41.3]; Golgi transport complex subunit 5 [PF10392.11, score=34.8]; Vacuolar-sorting protein 54, of GARP complex [PF10475.11, score=28.1]; Vps53-like, N-terminal [PF04100.14, score=21.6]} {Human: ENSG00000149823, VPS51, VPS51, GARP complex subunit, [RH, Score=555, Expect=0.0]} {Mouse: ENSMUSG00000024797, Vps51, VPS51 GARP complex subunit, [RH, Score=544, Expect=0.0]; ENSMUSG00000024799, Tm7sf2, transmembrane 7 superfamily member 2, [RH, Score=544, Expect=0.0]} {Dmel: FBgn0034380, Vps51, Vacuolar protein sorting 51, [RH, Score=487, Expect=7e-162]} {Celegans: WBGene00015176, vps-51, Vacuolar protein sorting-associated protein 51 homolog, [RH, Score=253, Expect=1e-73]} {Smed: dd_Smed_v6_8916_0_2, dd_Smed_v6_8916_0_2, [RH, Score=476, Expect=6e-157]} {RNA1509_9394} {RNA1310_5753, RNA1509_9394} {RNA1509_9394, RNA815_5831} |
| 4. | MligTC455_15844 | 654 | 13.62 | Mlig455_042729, Mlig455_063148 | Neo: Irradiation Age: - Region-enriched R5: 1.286/0.00137 |
CDR2L | 0.953 | - | - | - | - | - | 0.953 | Mlig455_042729 {REF} {Length: 3373} {Pfam: HAP1 N-terminal conserved region [PF04849.15, score=20.1]} {Human: ENSG00000109089, CDR2L, cerebellar degeneration related protein 2 like, [RH, Score=82.8, Expect=2e-16]} {Mouse: ENSMUSG00000050910, Cdr2l, cerebellar degeneration-related protein 2-like, [RH, Score=80.5, Expect=1e-15]} {Dmel: FBgn0032876, Cen, Centrocortin, [RH, Score=64.3, Expect=2e-10]} {Smed: dd_Smed_v6_3478_0_1, dd_Smed_v6_3478_0_1, [RH, Score=182, Expect=3e-52]} {RNA1509_21112} {RNA1310_7226} {RNA815_6428} Mlig455_063148 {REF} {Length: 3321} {Human: ENSG00000109089, CDR2L, cerebellar degeneration related protein 2 like, [RH, Score=82.8, Expect=2e-16]} {Mouse: ENSMUSG00000050910, Cdr2l, cerebellar degeneration-related protein 2-like, [RH, Score=80.5, Expect=9e-16]; ENSMUSG00000030878, Cdr2, cerebellar degeneration-related 2, [RH, Score=76.6, Expect=2e-14]} {Dmel: FBgn0032876, Cen, Centrocortin, [RH, Score=64.7, Expect=1e-10]} {Smed: dd_Smed_v6_3478_0_1, dd_Smed_v6_3478_0_1, [RH, Score=182, Expect=5e-52]} {RNA1509_21112} {RNA1310_6992, RNA1509_21112} {RNA1509_21112, RNA815_6428} |
| 5. | MligTC455_20077 | 331 | 6.9 | Mlig455_005551 | Neo: - Age: Up-Down-Up |
RABL6 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_005551 {REF} {Length: 4721} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=80.4]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=64.5]; ADP-ribosylation factor family [PF00025.23, score=49.0]; 50S ribosome-binding GTPase [PF01926.25, score=41.0]; Virulence-associated protein E [PF05272.13, score=22.1]; Bacterial TniB protein [PF05621.13, score=21.5]; RsgA GTPase [PF03193.18, score=18.8]} {Human: ENSG00000196642, RABL6, RAB, member RAS oncogene family like 6, [RH, Score=295, Expect=5e-88]} {Mouse: ENSMUSG00000015087, Rabl6, RAB, member RAS oncogene family-like 6, [RH, Score=276, Expect=3e-81]} {Dmel: FBgn0030200, RabX2, [Score=62.8, Expect=6e-11]} {Celegans: WBGene00008585, F08G12.1, [RH, Score=226, Expect=7e-64]} {Smed: dd_Smed_v6_6925_0_3, dd_Smed_v6_6925_0_3, [RH, Score=290, Expect=2e-91]} {RNA1509_28934} {RNA1310_15803} {RNA815_6147.1} |
| 6. | MligTC455_13636 | 272 | 5.66 | Mlig455_051510, Mlig455_051549 | Neo: - Age: - |
CUEDC1 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_051510 {REF} {Length: 3096} {TRANSSPLICED} {Pfam: CUE domain [PF02845.18, score=35.6]} {Human: ENSG00000180891, CUEDC1, CUE domain containing 1, [RH, Score=65.5, Expect=1e-10]} {Mouse: ENSMUSG00000098571, Cuedc1, CUE domain containing 1, [RH, Score=67.0, Expect=2e-11]; ENSMUSG00000018378, Cuedc1, CUE domain containing 1, [RH, Score=67.0, Expect=2e-11]} {Celegans: WBGene00009649, F43C1.5, [RH, Score=48.5, Expect=4e-06]} {RNA1509_46938} {RNA1310_6206.1} {RNA815_13189} Mlig455_051549 {REF} {Length: 3914} {TRANSSPLICED} {Pfam: CUE domain [PF02845.18, score=35.6]} {Human: ENSG00000180891, CUEDC1, CUE domain containing 1, [RH, Score=65.5, Expect=1e-10]} {Mouse: ENSMUSG00000018378, Cuedc1, CUE domain containing 1, [RH, Score=67.0, Expect=3e-11]; ENSMUSG00000098571, Cuedc1, CUE domain containing 1, [RH, Score=67.0, Expect=3e-11]} {Celegans: WBGene00009649, F43C1.5, [RH, Score=47.0, Expect=1e-05]} {RNA1509_46938, RNA1509_52331} {RNA1310_6206.1, RNA1509_46938, RNA1509_52331} {RNA1509_46938, RNA1509_52331, RNA815_13189} |