Data search
Results for MligTC455_52103
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_52103 | 272 | 5.67 | Mlig455_036273, Mlig455_055400 | Neo: - Age: Up-Down-Down |
CCNT1 | Mlig455_036273 {REF} {Length: 4574} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=36.0]; Transcription factor TFIIB repeat [PF00382.21, score=24.7]} {Human: ENSG00000129315, CCNT1, cyclin T1, [RH, Score=153, Expect=3e-39]; ENSG00000082258, CCNT2, cyclin T2, [RH, Score=151, Expect=8e-39]} {Mouse: ENSMUSG00000026349, Ccnt2, cyclin T2, [RH, Score=150, Expect=9e-39]; ENSMUSG00000011960, Ccnt1, cyclin T1, [RH, Score=147, Expect=2e-37]} {Dmel: FBgn0025455, CycT, Cyclin T, [RH, Score=146, Expect=6e-37]} {Celegans: WBGene00000508, cit-1.2, Cyclin-T1.2, [RH, Score=94.0, Expect=3e-20]} {Smed: dd_Smed_v6_1288_0_1, dd_Smed_v6_1288_0_1, [RH, Score=108, Expect=1e-25]} {RNA1509_14385} {RNA1310_14446} {RNA815_13055} Mlig455_055400 {REF} {Length: 3861} {RNA1509_14385, RNA1509_21947, RNA1509_38782, RNA1509_40077} {RNA1310_38997, RNA1509_21947, RNA1509_38782, RNA1509_40077} {RNA1509_21947, RNA1509_38782, RNA1509_40077, RNA815_26626} |
Cumulative graph for MligTC455_52103
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.398 | 2.958 | 0.16791 | 0.79245 | |
| RegionR2 | 1.117 | 2.958 | 0.16765 | 0.51262 | |
| RegionR3 | 0.935 | 2.958 | 0.12495 | 0.60896 | |
| RegionR4 | 0.138 | 2.958 | 0.82108 | 1.00000 | |
| RegionR5 | 1.306 | 2.958 | 0.01497 | 0.07812 | |
| RegionR6 | 1.341 | 2.958 | 0.03008 | 0.32024 | |
| RegionR7 | -2.252 | 2.958 | 0.05625 | 0.45621 | |
| RegionR8 | -0.187 | 2.958 | 0.86459 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -3.81 | 2.958 | 0.53718 | 1.00000 | |
| RegenerationR2 | 0.961 | 2.958 | 0.12794 | 0.55237 | |
| RegenerationR3 | 0.299 | 2.958 | 0.68197 | 0.94093 | |
| RegenerationR4 | 0.473 | 2.958 | 0.47234 | 0.85472 | |
| RegenerationR5 | 0.262 | 2.958 | 0.65563 | 0.93412 | |
| RegenerationR6 | -0.008 | 2.958 | 0.99750 | 1.00000 | |
| RegenerationBL | 1.374 | 2.958 | 0.14172 | 0.44893 | |
| RegenerationTP | 3.064 | 2.958 | 0.00105 | 0.04896 |
Genes with expression patterns similar to MligTC455_52103
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_52103 | 272 | 5.67 | Mlig455_036273, Mlig455_055400 | Neo: - Age: Up-Down-Down |
CCNT1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_036273 {REF} {Length: 4574} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=36.0]; Transcription factor TFIIB repeat [PF00382.21, score=24.7]} {Human: ENSG00000129315, CCNT1, cyclin T1, [RH, Score=153, Expect=3e-39]; ENSG00000082258, CCNT2, cyclin T2, [RH, Score=151, Expect=8e-39]} {Mouse: ENSMUSG00000026349, Ccnt2, cyclin T2, [RH, Score=150, Expect=9e-39]; ENSMUSG00000011960, Ccnt1, cyclin T1, [RH, Score=147, Expect=2e-37]} {Dmel: FBgn0025455, CycT, Cyclin T, [RH, Score=146, Expect=6e-37]} {Celegans: WBGene00000508, cit-1.2, Cyclin-T1.2, [RH, Score=94.0, Expect=3e-20]} {Smed: dd_Smed_v6_1288_0_1, dd_Smed_v6_1288_0_1, [RH, Score=108, Expect=1e-25]} {RNA1509_14385} {RNA1310_14446} {RNA815_13055} Mlig455_055400 {REF} {Length: 3861} {RNA1509_14385, RNA1509_21947, RNA1509_38782, RNA1509_40077} {RNA1310_38997, RNA1509_21947, RNA1509_38782, RNA1509_40077} {RNA1509_21947, RNA1509_38782, RNA1509_40077, RNA815_26626} |
| 2. | MligTC455_30248 | 265 | 5.52 | Mlig455_041172, Mlig455_066354 | Neo: - Age: Down-Down-Down |
0.978 | - | - | - | - | 0.978 | - | Mlig455_041172 {REF} {Length: 785} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=23.2]} {RNA1509_33034} {RNA1310_32948} {RNA815_33502.1} Mlig455_066354 {REF} {Length: 594} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=23.2]} {RNA1509_33034} {RNA1310_32948} {RNA815_33502.1} |
|
| 3. | MligTC455_29815 | 338 | 7.05 | Mlig455_034304 | Neo: - Age: Up-Down-Down |
RNF31 | 0.965 | - | - | - | - | 0.965 | - | Mlig455_034304 {REF} {Length: 7822} {TRANSSPLICED} {Pfam: E3 Ubiquitin Ligase RBR C-terminal domain [PF18091.3, score=100.1]; IBR domain, a half RING-finger domain [PF01485.23, score=34.3]; HOIP UBA domain pair [PF16678.7, score=27.7]} {Human: ENSG00000092098, RNF31, ring finger protein 31, [RH, Score=302, Expect=1e-85]; ENSG00000285152, RNF31, ring finger protein 31, [RH, Score=302, Expect=1e-85]} {Mouse: ENSMUSG00000047098, Rnf31, ring finger protein 31, [RH, Score=290, Expect=1e-82]} {Dmel: FBgn0031857, LUBEL, Linear Ubiquitin E3 ligase, [RH, Score=251, Expect=1e-67]} {Smed: dd_Smed_v6_4025_0_1, dd_Smed_v6_4025_0_1, [RH, Score=181, Expect=4e-47]} {RNA1509_4535, RNA1509_47445, RNA1509_54025, RNA1509_56070, RNA1509_6689} {RNA1310_1489, RNA1509_47445, RNA1509_54025, RNA1509_56070, RNA1509_6689} {RNA1509_47445, RNA1509_54025, RNA1509_56070, RNA1509_6689, RNA815_5200} |
| 4. | MligTC455_22564 | 697 | 14.51 | Mlig455_066912 | Neo: - Age: - Region-specific R4: 3.828 Region-enriched R4: 2.651/0.00001 Regeneration-downregulated R4: -2.406 Regeneration-depleted R4: -2.406 |
0.96 | - | - | - | - | 0.960 | - | Mlig455_066912 {REF} {Length: 1052} {Pfam: AAA domain [PF13521.8, score=62.7]; AAA domain [PF13238.8, score=24.0]} {RNA1509_15448} {RNA1310_37679} {RNA815_24534} | |
| 5. | MligTC455_50971 | 1166 | 24.29 | Mlig455_045333 | Neo: Int S/G2/M Age: Down-Up-Down Regeneration-enriched TP: 1.837 |
0.955 | - | - | - | - | 0.955 | - | Mlig455_045333 {REF} {Length: 1639} {Pfam: Basic region leucine zipper [PF07716.17, score=32.1]} {RNA1509_10047} {RNA1310_15657.2} {RNA815_6640.1} | |
| 6. | MligTC455_46076 | 129 | 2.68 | Mlig455_067176 | Neo: - Age: - Region-enriched R2: 4.988/0.00812 |
MITD1 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_067176 {REF} {Length: 3675} {Pfam: Phospholipase D-like domain at C-terminus of MIT [PF16565.7, score=147.5]; MIT (microtubule interacting and transport) domain [PF04212.20, score=45.3]} {Human: ENSG00000158411, MITD1, microtubule interacting and trafficking domain containing 1, [RH, Score=167, Expect=1e-50]} {Mouse: ENSMUSG00000026088, Mitd1, MIT, microtubule interacting and transport, domain containing 1, [RH, Score=168, Expect=2e-51]} {Dmel: FBgn0035482, CG14985, [RH, Score=144, Expect=3e-42]} {Celegans: WBGene00013436, Y66D12A.10, [RH, Score=113, Expect=2e-30]} {Smed: dd_Smed_v6_6498_0_1, dd_Smed_v6_6498_0_1, [RH, Score=144, Expect=2e-42]} {RNA1509_53277} {RNA1310_33336.2, RNA1509_53277} {RNA1509_53277, RNA815_16547} |
| 7. | MligTC455_18628 | 960 | 20 | Mlig455_022736 | Neo: - Age: logFC(26M/2M)=0.412 Region-enriched R2: 3.411/0.00867 |
SCUBE2 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_022736 {REF} {Length: 3064} {Pfam: EGF-like domain [PF00008.29, score=27.8]; Subtelomeric Variable Open Reading frame [PF17410.4, score=18.9]} {Human: ENSG00000175356, SCUBE2, signal peptide, CUB domain and EGF like domain containing 2, [Score=51.6, Expect=8e-07]} {RNA1509_57654} {RNA1310_12051.1} {RNA815_5009.1} |