Data search


search
Exact
Search

Results for MligTC455_52108

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_52108 475 9.90 Mlig455_012213

Neo: -

Age: Down-Down-Up

Mlig455_012213 {REF} {Length: 1126} {RNA1509_46495} {RNA1310_32026, RNA1509_46495} {RNA1509_46495, RNA815_11216.2}

Cumulative graph for MligTC455_52108

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.1 3.411 0.34630 0.98992
RegionR2 1.002 3.411 0.05224 0.27343
RegionR3 0.515 3.411 0.23875 0.78031
RegionR4 -0.255 3.411 0.59977 0.91305
RegionR5 -0.051 3.411 0.90581 1.00000
RegionR6 0.023 3.411 0.96315 1.00000
RegionR7 0.432 3.411 0.43942 1.00000
RegionR8 -0.565 3.411 0.44993 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.699 3.411 0.69084 1.00000
RegenerationR2 0.412 3.411 0.30519 0.74549
RegenerationR3 0.743 3.411 0.11696 0.53300
RegenerationR4 0.935 3.411 0.05984 0.39206
RegenerationR5 0.494 3.411 0.30279 0.73014
RegenerationR6 0.675 3.411 0.21312 0.55684
RegenerationBL -0.121 3.411 0.85501 1.00000
RegenerationTP 0.91 3.411 0.14429 0.56574


Genes with expression patterns similar to MligTC455_52108

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_52108 475 9.9 Mlig455_012213

Neo: -

Age: Down-Down-Up

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_012213 {REF} {Length: 1126} {RNA1509_46495} {RNA1310_32026, RNA1509_46495} {RNA1509_46495, RNA815_11216.2}
2. MligTC455_34559 580 12.07 Mlig455_066815

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=-0.459

GSTA2 1.791 - - 0.815 - - 0.976 Mlig455_066815 {REF} {Length: 1741} {Pfam: Glutathione S-transferase, N-terminal domain [PF02798.22, score=40.7]; Glutathione S-transferase, N-terminal domain [PF13409.8, score=27.2]; Glutathione S-transferase, N-terminal domain [PF13417.8, score=27.1]} {Human: ENSG00000244067, GSTA2, glutathione S-transferase alpha 2, [Score=66.6, Expect=8e-13]; ENSG00000243955, GSTA1, glutathione S-transferase alpha 1, [Score=64.7, Expect=3e-12]} {Mouse: ENSMUSG00000032348, Gsta4, glutathione S-transferase, alpha 4, [RH, Score=58.9, Expect=4e-11]} {Dmel: FBgn0010226, GstS1, Glutathione S transferase S1, [Score=66.6, Expect=5e-13]} {Celegans: WBGene00001786, gst-38, Glutathione S-Transferase, [Score=65.1, Expect=8e-13]} {Smed: dd_Smed_v6_20_0_1, dd_Smed_v6_20_0_1, [Score=95.1, Expect=3e-24]} {RNA1509_50934} {RNA1310_26310, RNA1509_50934} {RNA1509_50934, RNA815_40328}
3. MligTC455_35002 390 8.12 Mlig455_070372

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.711

SVEP1 1.708 0.954 - 0.754 - - - Mlig455_070372 {REF} {Length: 1042} {Pfam: EGF-like domain [PF00008.29, score=33.8]; EGF-like domain [PF07974.15, score=21.9]} {Human: ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=51.6, Expect=3e-07]; ENSG00000148400, NOTCH1, notch 1, [Score=51.2, Expect=4e-07]} {Mouse: ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=58.9, Expect=5e-10]} {Dmel: FBgn0004647, N, Notch, [Score=50.1, Expect=4e-07]} {RNA1509_29817} {RNA1310_28236} {RNA815_11876.1}
4. MligTC455_34322 452 9.41 Mlig455_010415

Neo: -

Age: logFC(26M/2M)=-0.330

DSP 1.659 - - 0.707 - - 0.952 Mlig455_010415 {REF} {Length: 4635} {Pfam: SH3 domain [PF17902.3, score=27.1]} {Human: ENSG00000096696, DSP, desmoplakin, [Score=58.5, Expect=7e-08]; ENSG00000178209, PLEC, plectin, [Score=57.4, Expect=2e-07]} {Mouse: ENSMUSG00000054889, Dsp, desmoplakin, [Score=58.5, Expect=6e-08]} {Smed: dd_Smed_v6_8220_0_4, dd_Smed_v6_8220_0_4, [Score=89.0, Expect=1e-17]} {RNA1509_10866} {RNA1310_5301} {RNA815_708.1}
5. MligTC455_43566 36 0.76 Mlig455_056590

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.289

0.977 0.977 - - - - - Mlig455_056590 {REF} {Length: 10047} {TRANSSPLICED} {Smed: dd_Smed_v6_5859_0_1, dd_Smed_v6_5859_0_1, [Score=93.2, Expect=3e-20]} {RNA1509_7758} {RNA1310_5822, RNA1509_7758} {RNA1509_7758, RNA815_2990}
6. MligTC455_31096 655 13.64 Mlig455_013922

Neo: -

Age: Down-Up-Up

Regeneration-upregulated R2: 2.048

Regeneration-enriched R2: 2.048

0.976 - - - - - 0.976 Mlig455_013922 {REF} {Length: 867} {RNA1509_8449} {RNA1310_47043} {RNA815_808.1}
7. MligTC455_50755 352 7.34 Mlig455_005518

Neo: -

Age: -

Regeneration-upregulated TP: 3.220

Regeneration-enriched TP: 3.220

0.975 - - - - - 0.975 Mlig455_005518 {REF} {Length: 1608} {NoTransDecoderORF} {RNA1310_97091}
8. MligTC455_29464 25 0.53 Mlig455_021892

Neo: -

Age: -

SDCCAG8 0.963 0.963 - - - - - Mlig455_021892 {REF} {Length: 3036} {Pfam: Centrosomal colon cancer autoantigen protein family [PF15964.7, score=164.7]} {Human: ENSG00000276111, SDCCAG8, serologically defined colon cancer antigen 8, [RH, Score=120, Expect=2e-27]; ENSG00000054282, SDCCAG8, serologically defined colon cancer antigen 8, [RH, Score=120, Expect=2e-27]} {Mouse: ENSMUSG00000026504, Sdccag8, serologically defined colon cancer antigen 8, [RH, Score=109, Expect=4e-24]} {Dmel: FBgn0266566, CG45105, [Score=52.4, Expect=2e-06]} {Smed: dd_Smed_v6_9295_0_2, dd_Smed_v6_9295_0_2, [RH, Score=87.8, Expect=7e-18]} {RNA1509_42574} {RNA1310_5942.1} {RNA815_9353.1}
9. MligTC455_37401 592 12.33 Mlig455_056107

Neo: -

Age: logFC(26M/2M)=-0.696

0.961 - - - 0.961 - - Mlig455_056107 {REF} {Length: 2111} {RNA1509_30010} {RNA1310_55937, RNA1509_30010} {RNA1509_30010, RNA815_28707}
10. MligTC455_48103 628 13.08 Mlig455_057218

Neo: -

Age: Up-Up-Down

RGS22 0.961 0.961 - - - - - Mlig455_057218 {REF} {Length: 3461} {Pfam: Regulator of G protein signaling domain [PF00615.21, score=26.0]} {Human: ENSG00000132554, RGS22, regulator of G protein signaling 22, [RH, Score=72.4, Expect=3e-12]} {Mouse: ENSMUSG00000037627, Rgs22, regulator of G-protein signalling 22, [RH, Score=56.6, Expect=1e-07]} {Smed: dd_Smed_v6_11778_0_1, dd_Smed_v6_11778_0_1, [Score=246, Expect=4e-68]} {RNA1509_2536} {RNA1310_3477} {RNA815_616.1}
11. MligTC455_18037 96 2 Mlig455_060616

Neo: -

Age: -

0.96 0.960 - - - - - Mlig455_060616 {REF} {Length: 483} {NoTransDecoderORF} {RNA1509_37916} {RNA1310_32119.1} {RNA815_34585}
12. MligTC455_25566 133 2.77 Mlig455_013513

Neo: -

Age: logFC(26M/2M)=-0.283

ANKAR 0.96 0.960 - - - - - Mlig455_013513 {REF} {Length: 4806} {TRANSSPLICED} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=53.6]; Ankyrin repeats (many copies) [PF13857.8, score=25.9]; Ankyrin repeats (3 copies) [PF12796.9, score=22.4]; Ankyrin repeats (many copies) [PF13637.8, score=19.3]} {Human: ENSG00000151687, ANKAR, ankyrin and armadillo repeat containing, [Score=265, Expect=1e-73]} {Mouse: ENSMUSG00000039342, Ankar, ankyrin and armadillo repeat containing, [Score=292, Expect=3e-83]} {Smed: dd_Smed_v6_10062_0_1, dd_Smed_v6_10062_0_1, [RH, Score=450, Expect=1e-144]} {RNA1509_10980} {RNA1310_5551, RNA1509_10980} {RNA1509_10980, RNA815_1615}
13. MligTC455_29243 202 4.21 Mlig455_007367, Mlig455_066683

Neo: -

Age: -

0.959 0.959 - - - - -

Mlig455_007367 {REF} {Length: 1750} {NoTransDecoderORF} {RNA1509_57939} {RNA1310_66625}

Mlig455_066683 {REF} {Length: 1758} {NoTransDecoderORF} {RNA1509_57939} {RNA1310_66625}
14. MligTC455_38471 616 12.83 Mlig455_039751

Neo: -

Age: Down-Up-Down

KIF3A 0.959 - - - - - 0.959 Mlig455_039751 {REF} {Length: 3329} {TRANSSPLICED} {Pfam: Kinesin motor domain [PF00225.25, score=390.5]; Microtubule binding [PF16796.7, score=88.9]} {Human: ENSG00000131437, KIF3A, kinesin family member 3A, [RH, Score=827, Expect=0.0]} {Mouse: ENSMUSG00000018395, Kif3a, kinesin family member 3A, [RH, Score=802, Expect=0.0]} {Dmel: FBgn0004380, Klp64D, Kinesin-like protein at 64D, [RH, Score=645, Expect=0.0]} {Celegans: WBGene00002230, klp-20, Kinesin-like protein, [RH, Score=628, Expect=0.0]} {Smed: dd_Smed_v6_4343_0_1, dd_Smed_v6_4343_0_1, [Score=682, Expect=0.0]} {RNA1509_4278, RNA1509_43523} {RNA1310_9183.2, RNA1509_43523} {RNA1509_43523, RNA815_3246}
15. MligTC455_15779 346 7.2 Mlig455_051968

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.525

0.958 0.958 - - - - - Mlig455_051968 {REF} {Length: 790} {RNA1509_45384} {RNA1310_49242.1} {RNA815_27288}
16. MligTC455_46348 246 5.12 Mlig455_023022, Mlig455_023167

Neo: -

Age: -

ELOF1 0.957 0.957 - - - - -

Mlig455_023022 {REF} {Length: 1062} {TRANSSPLICED} {Pfam: Transcription elongation factor Elf1 like [PF05129.15, score=104.0]} {Human: ENSG00000130165, ELOF1, elongation factor 1 homolog, [RH, Score=102, Expect=2e-29]} {Mouse: ENSMUSG00000013822, Elof1, ELF1 homolog, elongation factor 1, [RH, Score=101, Expect=1e-29]} {Dmel: FBgn0063670, CG40228, [RH, Score=133, Expect=2e-42]} {Celegans: WBGene00013219, Y54G11A.11, Transcription elongation factor 1 homolog, [RH, Score=134, Expect=6e-43]} {Smed: dd_Smed_v6_3505_0_1, dd_Smed_v6_3505_0_1, [RH, Score=122, Expect=2e-38]} {RNA1509_9167} {RNA1310_32925} {RNA815_15186.1}

Mlig455_023167 {REF} {Length: 1061} {TRANSSPLICED} {Pfam: Transcription elongation factor Elf1 like [PF05129.15, score=104.0]} {Human: ENSG00000130165, ELOF1, elongation factor 1 homolog, [RH, Score=102, Expect=2e-29]} {Mouse: ENSMUSG00000013822, Elof1, ELF1 homolog, elongation factor 1, [RH, Score=101, Expect=1e-29]} {Dmel: FBgn0063670, CG40228, [RH, Score=133, Expect=2e-42]} {Celegans: WBGene00013219, Y54G11A.11, Transcription elongation factor 1 homolog, [RH, Score=134, Expect=6e-43]} {Smed: dd_Smed_v6_3505_0_1, dd_Smed_v6_3505_0_1, [RH, Score=122, Expect=2e-38]} {RNA1509_9167} {RNA1310_32925} {RNA815_15186.1}
17. MligTC455_53635 117 2.44 Mlig455_005517

Neo: -

Age: Down-Down-Up

0.957 0.957 - - - - - Mlig455_005517 {REF} {Length: 1492} {Pfam: Domain of unknown function (DUF4606) [PF15379.8, score=21.9]} {RNA1509_29719} {RNA1310_26435, RNA1509_29719} {RNA1509_29719, RNA815_10531.1}
18. MligTC455_27627 225 4.69 Mlig455_065807

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.382

HEYL 0.956 0.956 - - - - - Mlig455_065807 {REF} {Length: 1800} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=45.1]; Hairy Orange [PF07527.15, score=20.8]} {Human: ENSG00000163909, HEYL, hes related family bHLH transcription factor with YRPW motif-like, [Score=85.9, Expect=2e-18]; ENSG00000135547, HEY2, hes related family bHLH transcription factor with YRPW motif 2, [Score=85.5, Expect=2e-18]} {Mouse: ENSMUSG00000019789, Hey2, hairy/enhancer-of-split related with YRPW motif 2, [Score=86.3, Expect=2e-18]; ENSMUSG00000032744, Heyl, hairy/enhancer-of-split related with YRPW motif-like, [Score=85.5, Expect=2e-18]} {Dmel: FBgn0259938, cwo, clockwork orange, [RH, Score=84.0, Expect=2e-17]} {Smed: dd_Smed_v6_22479_0_1, dd_Smed_v6_22479_0_1, [Score=70.9, Expect=9e-14]} {RNA1509_35089} {RNA1310_373, RNA1509_35089} {RNA1509_35089, RNA815_5586}
19. MligTC455_43302 297 6.19 Mlig455_001798

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.756

0.955 0.955 - - - - - Mlig455_001798 {REF} {Length: 2162} {RNA1509_14667} {RNA1310_23413, RNA1509_14667} {RNA1509_14667, RNA815_13658}
20. MligTC455_16082 200 4.16 Mlig455_047900

Neo: -

Age: logFC(26M/2M)=2.134

0.953 0.953 - - - - - Mlig455_047900 {REF} {Length: 1622} {TRANSSPLICED} {Pfam: Family of unknown function (DUF5810) [PF19126.2, score=24.1]; Ubiquitin-Binding Zinc Finger [PF18439.3, score=19.7]} {RNA1509_56622} {RNA1310_70015} {RNA815_35594}
21. MligTC455_32017 53 1.1 Mlig455_056997

Neo: -

Age: Up-Down-Down

DNAJC7 0.953 0.953 - - - - - Mlig455_056997 {REF} {Length: 2381} {Pfam: Tetratricopeptide repeat [PF00515.30, score=36.2]; Tetratricopeptide repeat [PF07719.19, score=35.8]; TPR repeat [PF13414.8, score=29.2]; Tetratricopeptide repeat [PF13371.8, score=28.8]; UBA/TS-N domain [PF00627.33, score=24.1]; Tetratricopeptide repeat [PF13428.8, score=23.4]; Tetratricopeptide repeat [PF13181.8, score=20.0]} {Human: ENSG00000168259, DNAJC7, DnaJ heat shock protein family (Hsp40) member C7, [Score=66.6, Expect=4e-11]} {Mouse: ENSMUSG00000014195, Dnajc7, DnaJ heat shock protein family (Hsp40) member C7, [Score=67.0, Expect=7e-13]; ENSMUSG00000003099, Ppp5c, protein phosphatase 5, catalytic subunit, [Score=63.9, Expect=2e-10]} {Dmel: FBgn0032586, Tpr2, Tetratricopeptide repeat protein 2, [Score=54.3, Expect=2e-07]} {Celegans: WBGene00004194, prx-5, PeRoXisome assembly factor, [Score=48.9, Expect=6e-06]} {Smed: dd_Smed_v6_12396_0_1, dd_Smed_v6_12396_0_1, [Score=53.5, Expect=1e-07]} {RNA1509_24467, RNA1509_7162} {RNA1310_9351.1, RNA1509_24467} {RNA1509_24467, RNA815_11968}
22. MligTC455_24286 85 1.76 Mlig455_062007

Neo: -

Age: logFC(26M/2M)=0.677

PIGG 0.952 0.952 - - - - - Mlig455_062007 {REF} {Length: 4663} {TRANSSPLICED} {Pfam: GPI ethanolamine phosphate transferase membrane region [PF19316.1, score=110.5]; Type I phosphodiesterase / nucleotide pyrophosphatase [PF01663.24, score=48.7]; Sulfatase [PF00884.25, score=24.7]} {Human: ENSG00000174227, PIGG, phosphatidylinositol glycan anchor biosynthesis class G, [RH, Score=218, Expect=3e-61]} {Mouse: ENSMUSG00000029263, Pigg, phosphatidylinositol glycan anchor biosynthesis, class G, [RH, Score=213, Expect=3e-56]} {Dmel: FBgn0033187, PIG-G, Phosphatidylinositol glycan anchor biosynthesis class G, [RH, Score=172, Expect=1e-43]} {Celegans: WBGene00009204, F28C6.4, [RH, Score=189, Expect=1e-49]} {Smed: dd_Smed_v6_10095_0_1, dd_Smed_v6_10095_0_1, [RH, Score=242, Expect=1e-66]} {RNA1509_30824} {RNA1310_20277} {RNA815_18402}
23. MligTC455_22920 196 4.08 Mlig455_039387

Neo: -

Age: -

TRPC4 0.951 - - - - 0.951 - Mlig455_039387 {REF} {Length: 2289} {Human: ENSG00000133107, TRPC4, transient receptor potential cation channel subfamily C member 4, [Score=62.4, Expect=2e-10]} {Mouse: ENSMUSG00000027748, Trpc4, transient receptor potential cation channel, subfamily C, member 4, [Score=63.5, Expect=6e-11]} {Dmel: FBgn0032593, Trpgamma, Transient receptor potential cation channel gamma, [Score=98.6, Expect=6e-23]} {Smed: dd_Smed_v6_20495_0_1, dd_Smed_v6_20495_0_1, [Score=155, Expect=1e-42]} {RNA1509_26602} {RNA1310_3579} {RNA815_924}
24. MligTC455_41184 122 2.54 Mlig455_027548

Neo: -

Age: -

NR2E1 0.951 0.951 - - - - - Mlig455_027548 {REF} {Length: 3026} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=100.4]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=36.9]} {Human: ENSG00000112333, NR2E1, nuclear receptor subfamily 2 group E member 1, [Score=132, Expect=2e-33]} {Mouse: ENSMUSG00000019803, Nr2e1, nuclear receptor subfamily 2, group E, member 1, [Score=134, Expect=3e-34]} {Dmel: FBgn0003720, tll, tailless, [Score=124, Expect=1e-30]} {Celegans: WBGene00021417, nhr-236, Nuclear Hormone Receptor family, [RH, Score=142, Expect=1e-38]} {Smed: dd_Smed_v6_25420_0_1, dd_Smed_v6_25420_0_1, [Score=167, Expect=1e-45]} {RNA1509_35109} {RNA1310_11088} {RNA815_39381}
25. MligTC455_29040 262 5.46 Mlig455_003133

Neo: -

Age: Down-Up-Down

VWA3B 0.95 - - 0.950 - - - Mlig455_003133 {REF} {Length: 4304} {TRANSSPLICED} {Pfam: von Willebrand factor type A domain [PF13768.8, score=82.5]; von Willebrand factor type A domain [PF00092.30, score=41.8]; von Willebrand factor type A domain [PF13519.8, score=31.6]} {Human: ENSG00000168658, VWA3B, von Willebrand factor A domain containing 3B, [RH, Score=608, Expect=0.0]} {Mouse: ENSMUSG00000050122, Vwa3b, von Willebrand factor A domain containing 3B, [RH, Score=446, Expect=2e-141]} {Smed: dd_Smed_v6_9363_0_2, dd_Smed_v6_9363_0_2, [RH, Score=928, Expect=0.0]} {RNA1509_3581} {RNA1310_1567} {RNA815_329.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA