Data search
Results for MligTC455_52114
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_52114 | 178 | 3.70 | Mlig455_040724, Mlig455_058524 | Neo: - Age: Down-Up-Down |
Mlig455_040724 {REF} {Length: 1424} {RNA1310_26686} {RNA815_46352} Mlig455_058524 {REF} {Length: 1489} {RNA1310_26686} {RNA815_46352} |
Cumulative graph for MligTC455_52114
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.041 | 2.641 | 0.29799 | 0.94764 | |
| RegionR2 | 0.158 | 2.641 | 0.80906 | 1.00000 | |
| RegionR3 | 0.2 | 2.641 | 0.78318 | 1.00000 | |
| RegionR4 | 0.804 | 2.641 | 0.52019 | 0.84517 | |
| RegionR5 | 2.178 | 2.641 | 0.00958 | 0.05589 | |
| RegionR6 | 1.047 | 2.641 | 0.32623 | 0.91400 | |
| RegionR7 | 0.99 | 2.641 | 0.41371 | 1.00000 | |
| RegionR8 | -0.337 | 2.641 | 0.93880 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.243 | 2.641 | 0.99999 | 1.00000 | |
| RegenerationR2 | -0.392 | 2.641 | 0.64042 | 0.93153 | |
| RegenerationR3 | 0.473 | 2.641 | 0.59811 | 0.90737 | |
| RegenerationR4 | 0.532 | 2.641 | 0.58958 | 0.90864 | |
| RegenerationR5 | 0.533 | 2.641 | 0.48661 | 0.85045 | |
| RegenerationR6 | 0.368 | 2.641 | 0.67830 | 0.91324 | |
| RegenerationBL | -0.356 | 2.641 | 0.75594 | 1.00000 | |
| RegenerationTP | -0.243 | 2.641 | 0.85194 | 1.00000 |
Genes with expression patterns similar to MligTC455_52114
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_52114 | 178 | 3.7 | Mlig455_040724, Mlig455_058524 | Neo: - Age: Down-Up-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_040724 {REF} {Length: 1424} {RNA1310_26686} {RNA815_46352} Mlig455_058524 {REF} {Length: 1489} {RNA1310_26686} {RNA815_46352} |
|
| 2. | MligTC455_28948 | 433 | 9.03 | Mlig455_014729 | Neo: Int S/G2/M Age: - |
1.675 | - | - | - | 0.951 | - | 0.724 | Mlig455_014729 {REF} {Length: 2778} {TRANSSPLICED} {RNA1509_32400, RNA1509_53618} {RNA1310_6731.1, RNA1509_32400, RNA1509_53618} {RNA1509_32400, RNA1509_53618, RNA815_15157} | |
| 3. | MligTC455_11666 | 89 | 1.85 | Mlig455_006268 | Neo: Germline Age: - Region-enriched R2: 6.472/0.02365 |
GLRA3 | 0.983 | - | - | - | - | 0.983 | - | Mlig455_006268 {REF} {Length: 3571} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=133.2]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=52.9]; Condensin II complex subunit CAP-H2 or CNDH2, C-term [PF16858.7, score=18.9]} {Human: ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=200, Expect=3e-60]; ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=197, Expect=7e-60]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=192, Expect=4e-57]} {Mouse: ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=199, Expect=2e-59]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=197, Expect=3e-59]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=191, Expect=8e-57]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=191, Expect=1e-56]} {Dmel: FBgn0004244, Rdl, Resistant to dieldrin, [Score=250, Expect=1e-78]} {Celegans: WBGene00017389, lgc-38, Ligand-Gated ion Channel, [Score=217, Expect=6e-67]} {Smed: dd_Smed_v6_25116_0_1, dd_Smed_v6_25116_0_1, [Score=176, Expect=3e-51]} {RNA1509_471} {RNA1310_40861.1} {RNA815_41152} |
| 4. | MligTC455_22774 | 156 | 3.25 | Mlig455_045395 | Neo: - Age: - Region-enriched R5: 2.504/0.00000 |
0.956 | - | - | - | - | 0.956 | - | Mlig455_045395 {REF} {Length: 3099} {Mouse: ENSMUSG00000030878, Cdr2, cerebellar degeneration-related 2, [Score=48.9, Expect=5e-06]} {Dmel: FBgn0032876, Cen, Centrocortin, [Score=64.7, Expect=4e-11]} {Smed: dd_Smed_v6_3478_0_1, dd_Smed_v6_3478_0_1, [Score=61.2, Expect=2e-10]} {RNA1310_40607} {RNA815_42744} | |
| 5. | MligTC455_41451 | 401 | 8.36 | Mlig455_058702 | Neo: - Age: - |
CBFB | 0.952 | - | - | - | - | - | 0.952 | Mlig455_058702 {REF} {Length: 1469} {Pfam: Core binding factor beta subunit [PF02312.19, score=134.9]} {Human: ENSG00000067955, CBFB, core-binding factor subunit beta, [RH, Score=99.0, Expect=2e-24]} {Mouse: ENSMUSG00000031885, Cbfb, core binding factor beta, [RH, Score=99.4, Expect=1e-24]} {Dmel: FBgn0013755, Bro, Brother, [Score=96.7, Expect=1e-23]} {Smed: dd_Smed_v6_2875_0_1, dd_Smed_v6_2875_0_1, [RH, Score=93.2, Expect=4e-23]} {RNA1310_43420} {RNA815_49748} |
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