TomoSeq data search

Data search

Results for MligTC455_52191

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_52191	48	1.01	Mlig455_023963	Neo: - Age: -		Mlig455_023963 {REF} {Length: 3836} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=57.0, Expect=3e-08]} {RNA1509_23776} {RNA1310_15288} {RNA815_7581}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_52191

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	2.353	1.202	0.36840	1.00000
RegionR2	1.318	1.202	0.25875	0.63969
RegionR3	-0.159	1.202	0.62892	1.00000
RegionR4	-1.539	1.202	0.99814	1.00000
RegionR5	0.209	1.202	0.75680	1.00000
RegionR6	0.276	1.202	0.63595	1.00000
RegionR7	-4.359	1.202	0.10458	0.61549
RegionR8	1.902	1.202	0.32558	0.95832

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.315	1.202	0.97695	1.00000
RegenerationR2	1.05	1.202	0.27119	0.71694
RegenerationR3	1.638	1.202	0.09521	0.49581
RegenerationR4	2.016	1.202	0.07455	0.43425
RegenerationR5	0.704	1.202	0.13485	0.54353
RegenerationR6	-0.185	1.202	0.81200	0.98377
RegenerationBL	1.272	1.202	0.99965	1.00000
RegenerationTP	-0.694	1.202	0.99974	1.00000

Genes with expression patterns similar to MligTC455_52191

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_52191	48	1.01	Mlig455_023963	Neo: - Age: -		3	1.000	1.000	-	-	-	1.000	Mlig455_023963 {REF} {Length: 3836} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=57.0, Expect=3e-08]} {RNA1509_23776} {RNA1310_15288} {RNA815_7581}
2.	MligTC455_45253	300	6.25	Mlig455_023957	Neo: - Age: -	TTC28	0.952	0.952	-	-	-	-	-	Mlig455_023957 {REF} {Length: 7725} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13424.8, score=222.8]; Tetratricopeptide repeat [PF13176.8, score=159.2]; Tetratricopeptide repeat [PF00515.30, score=149.5]; CHAT domain [PF12770.9, score=142.5]; Tetratricopeptide repeat [PF07719.19, score=95.3]; Tetratricopeptide repeat [PF13181.8, score=73.0]; Tetratricopeptide repeat [PF13374.8, score=35.7]; MalT-like TPR region [PF17874.3, score=27.5]; Rapsyn N-terminal myristoylation and linker region [PF10579.11, score=20.1]} {Human: ENSG00000100154, TTC28, tetratricopeptide repeat domain 28, [RH, Score=920, Expect=0.0]} {Mouse: ENSMUSG00000033209, Ttc28, tetratricopeptide repeat domain 28, [RH, Score=1106, Expect=0.0]} {Dmel: FBgn0262719, CG43163, [RH, Score=752, Expect=0.0]} {Celegans: WBGene00000092, ags-3, Activator of G protein Signalling, [Score=62.0, Expect=4e-09]} {Smed: dd_Smed_v6_6548_1_1, dd_Smed_v6_6548_1_1, [Score=99.8, Expect=7e-21]} {RNA1509_7377} {RNA1310_1046.2} {RNA815_5140}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_52191

1.01

Mlig455_023963

Neo: -

Age: -

1.000

Mlig455_023963 {REF} {Length: 3836} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=57.0, Expect=3e-08]} {RNA1509_23776} {RNA1310_15288} {RNA815_7581}

MligTC455_45253

300

6.25

Mlig455_023957

Neo: -

Age: -

TTC28

0.952

Mlig455_023957 {REF} {Length: 7725} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13424.8, score=222.8]; Tetratricopeptide repeat [PF13176.8, score=159.2]; Tetratricopeptide repeat [PF00515.30, score=149.5]; CHAT domain [PF12770.9, score=142.5]; Tetratricopeptide repeat [PF07719.19, score=95.3]; Tetratricopeptide repeat [PF13181.8, score=73.0]; Tetratricopeptide repeat [PF13374.8, score=35.7]; MalT-like TPR region [PF17874.3, score=27.5]; Rapsyn N-terminal myristoylation and linker region [PF10579.11, score=20.1]} {Human: ENSG00000100154, TTC28, tetratricopeptide repeat domain 28, [RH, Score=920, Expect=0.0]} {Mouse: ENSMUSG00000033209, Ttc28, tetratricopeptide repeat domain 28, [RH, Score=1106, Expect=0.0]} {Dmel: FBgn0262719, CG43163, [RH, Score=752, Expect=0.0]} {Celegans: WBGene00000092, ags-3, Activator of G protein Signalling, [Score=62.0, Expect=4e-09]} {Smed: dd_Smed_v6_6548_1_1, dd_Smed_v6_6548_1_1, [Score=99.8, Expect=7e-21]} {RNA1509_7377} {RNA1310_1046.2} {RNA815_5140}