TomoSeq data search

Data search

Results for MligTC455_52284

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_52284

178

3.71

Mlig455_027155

Neo: -

Age: -

MCTS1

Mlig455_027155 {REF} {Length: 1842} {TRANSSPLICED} {Pfam: Pre-PUA-like domain [PF17832.3, score=80.5]; PUA domain [PF01472.22, score=62.0]} {Human: ENSG00000232119, MCTS1, MCTS1, re-initiation and release factor, [RH, Score=238, Expect=8e-81]; ENSG00000101898, MCTS2P, malignant T cell amplified sequence 2, pseudogene, [RH, Score=230, Expect=2e-77]} {Mouse: ENSMUSG00000000355, Mcts1, malignant T cell amplified sequence 1, [RH, Score=239, Expect=3e-81]; ENSMUSG00000042814, Mcts2, malignant T cell amplified sequence 2, [RH, Score=231, Expect=4e-78]} {Dmel: FBgn0029833, MCTS1, Malignant T cell amplified sequence 1, [RH, Score=230, Expect=7e-78]} {Celegans: WBGene00015703, C11D2.7, [RH, Score=225, Expect=9e-76]} {Smed: dd_Smed_v6_3656_0_1, dd_Smed_v6_3656_0_1, [RH, Score=261, Expect=5e-90]} {RNA1509_10311, RNA1509_8184} {RNA1310_28656, RNA1509_10311, RNA1509_8184} {RNA1509_10311, RNA1509_8184, RNA815_13050}

Cumulative graph for MligTC455_52284

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.082	2.589	0.70371	1.00000
RegionR2	-0.359	2.589	0.69273	1.00000
RegionR3	0.535	2.589	0.38946	0.92001
RegionR4	1.732	2.589	0.03474	0.15062
RegionR5	0.47	2.589	0.40821	0.76690
RegionR6	0.364	2.589	0.58629	1.00000
RegionR7	-2.8	2.589	0.06318	0.48283
RegionR8	-1.024	2.589	0.47055	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.955	2.589	0.44967	1.00000
RegenerationR2	-0.224	2.589	0.70678	0.95858
RegenerationR3	0.56	2.589	0.35367	0.77273
RegenerationR4	0.226	2.589	0.75237	0.97037
RegenerationR5	0.848	2.589	0.10024	0.48198
RegenerationR6	0.332	2.589	0.59720	0.86725
RegenerationBL	1.937	2.589	0.07281	0.31457
RegenerationTP	0.391	2.589	0.78970	1.00000

Genes with expression patterns similar to MligTC455_52284

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_52284	178	3.71	Mlig455_027155	Neo: - Age: -	MCTS1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_027155 {REF} {Length: 1842} {TRANSSPLICED} {Pfam: Pre-PUA-like domain [PF17832.3, score=80.5]; PUA domain [PF01472.22, score=62.0]} {Human: ENSG00000232119, MCTS1, MCTS1, re-initiation and release factor, [RH, Score=238, Expect=8e-81]; ENSG00000101898, MCTS2P, malignant T cell amplified sequence 2, pseudogene, [RH, Score=230, Expect=2e-77]} {Mouse: ENSMUSG00000000355, Mcts1, malignant T cell amplified sequence 1, [RH, Score=239, Expect=3e-81]; ENSMUSG00000042814, Mcts2, malignant T cell amplified sequence 2, [RH, Score=231, Expect=4e-78]} {Dmel: FBgn0029833, MCTS1, Malignant T cell amplified sequence 1, [RH, Score=230, Expect=7e-78]} {Celegans: WBGene00015703, C11D2.7, [RH, Score=225, Expect=9e-76]} {Smed: dd_Smed_v6_3656_0_1, dd_Smed_v6_3656_0_1, [RH, Score=261, Expect=5e-90]} {RNA1509_10311, RNA1509_8184} {RNA1310_28656, RNA1509_10311, RNA1509_8184} {RNA1509_10311, RNA1509_8184, RNA815_13050}
2.	MligTC455_52282	211	4.39	Mlig455_015194	Neo: - Age: Down-Down-Up	MCTS1	4.447	0.958	0.886	-	0.835	0.884	0.884	Mlig455_015194 {REF} {Length: 1784} {TRANSSPLICED} {Pfam: Pre-PUA-like domain [PF17832.3, score=80.1]; PUA domain [PF01472.22, score=62.0]} {Human: ENSG00000232119, MCTS1, MCTS1, re-initiation and release factor, [RH, Score=240, Expect=2e-81]; ENSG00000101898, MCTS2P, malignant T cell amplified sequence 2, pseudogene, [RH, Score=228, Expect=7e-77]} {Mouse: ENSMUSG00000000355, Mcts1, malignant T cell amplified sequence 1, [RH, Score=241, Expect=6e-82]; ENSMUSG00000042814, Mcts2, malignant T cell amplified sequence 2, [RH, Score=230, Expect=1e-77]} {Dmel: FBgn0029833, MCTS1, Malignant T cell amplified sequence 1, [RH, Score=229, Expect=2e-77]} {Celegans: WBGene00015703, C11D2.7, [RH, Score=225, Expect=6e-76]} {Smed: dd_Smed_v6_3656_0_1, dd_Smed_v6_3656_0_1, [RH, Score=262, Expect=1e-90]} {RNA1509_10311, RNA1509_33036} {RNA1310_28656, RNA1509_33036} {RNA1509_33036, RNA815_13050}
3.	MligTC455_53732	1576	32.83	Mlig455_042222	Neo: - Age: -	PPP2CA	1.841	-	-	-	0.872	-	0.969	Mlig455_042222 {REF} {Length: 1960} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=119.5]} {Human: ENSG00000113575, PPP2CA, protein phosphatase 2 catalytic subunit alpha, [RH, Score=590, Expect=0.0]; ENSG00000104695, PPP2CB, protein phosphatase 2 catalytic subunit beta, [RH, Score=588, Expect=0.0]} {Mouse: ENSMUSG00000020349, Ppp2ca, protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform, [RH, Score=589, Expect=0.0]; ENSMUSG00000009630, Ppp2cb, protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform, [RH, Score=588, Expect=0.0]} {Dmel: FBgn0004177, mts, microtubule star, [RH, Score=583, Expect=0.0]} {Celegans: WBGene00002363, let-92, Serine/threonine-protein phosphatase 2A catalytic subunit, [RH, Score=565, Expect=0.0]} {Smed: dd_Smed_v6_1280_0_1, dd_Smed_v6_1280_0_1, [RH, Score=580, Expect=0.0]} {RNA1509_12359, RNA1509_24968, RNA1509_4825} {RNA1310_28799, RNA1509_24968, RNA1509_4825} {RNA1509_24968, RNA1509_4825, RNA815_5316.1}
4.	MligTC455_40003	1486	30.96	Mlig455_036985	Neo: - Age: - Region-enriched R3: 1.161/0.02334	ISOC2	1.689	-	-	-	-	0.954	0.735	Mlig455_036985 {REF} {Length: 2373} {TRANSSPLICED} {Pfam: Isochorismatase family [PF00857.22, score=108.8]} {Human: ENSG00000063241, ISOC2, isochorismatase domain containing 2, [RH, Score=205, Expect=5e-67]} {Mouse: ENSMUSG00000086784, Isoc2a, isochorismatase domain containing 2a, [RH, Score=209, Expect=7e-69]} {Dmel: FBgn0035044, CG3663, [RH, Score=155, Expect=1e-47]} {Celegans: WBGene00009436, marb-1, Mitochondrial Associated RiBonuclease homolog, [RH, Score=199, Expect=4e-65]} {Smed: dd_Smed_v6_6232_0_1, dd_Smed_v6_6232_0_1, [RH, Score=237, Expect=5e-80]} {RNA1509_19343} {RNA1310_40301, RNA1509_19343} {RNA1509_19343, RNA815_19391}
5.	MligTC455_41202	366	7.62	Mlig455_062321	Neo: - Age: Down-Up-Down	ARFIP2	0.956	-	-	-	-	0.956	-	Mlig455_062321 {REF} {Length: 3538} {TRANSSPLICED} {Pfam: Arfaptin-like domain [PF06456.15, score=170.5]} {Human: ENSG00000132254, ARFIP2, ADP ribosylation factor interacting protein 2, [Score=222, Expect=4e-70]; ENSG00000164144, ARFIP1, ADP ribosylation factor interacting protein 1, [Score=222, Expect=1e-69]} {Mouse: ENSMUSG00000074513, Arfip1, ADP-ribosylation factor interacting protein 1, [Score=223, Expect=4e-70]; ENSMUSG00000030881, Arfip2, ADP-ribosylation factor interacting protein 2, [Score=221, Expect=1e-69]; ENSMUSG00000102805, Gm37240, predicted gene, 37240, [Score=220, Expect=2e-70]} {Dmel: FBgn0037884, Arfip, Arfaptin, [Score=219, Expect=1e-68]} {Celegans: WBGene00010040, F54C8.7, [Score=122, Expect=2e-32]} {Smed: dd_Smed_v6_5732_0_1, dd_Smed_v6_5732_0_1, [Score=207, Expect=8e-65]} {RNA1509_22107} {RNA1310_24267, RNA1509_22107} {RNA1509_22107, RNA815_18488}
6.	MligTC455_40772	633	13.18	Mlig455_000911	Neo: - Age: Up-Down-Down Region-enriched R3: 1.927/0.00277	BEST3	0.951	-	-	-	-	-	0.951	Mlig455_000911 {REF} {Length: 2760} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=178.5]} {Human: ENSG00000127325, BEST3, bestrophin 3, [Score=159, Expect=2e-41]} {Mouse: ENSMUSG00000020169, Best3, bestrophin 3, [Score=162, Expect=2e-42]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=190, Expect=3e-52]} {Celegans: WBGene00015286, best-3, Bestrophin homolog, [Score=160, Expect=2e-42]} {Smed: dd_Smed_v6_2084_0_1, dd_Smed_v6_2084_0_1, [RH, Score=322, Expect=8e-105]} {RNA1509_44952} {RNA1310_13111} {RNA815_15310}

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