Data search
Results for MligTC455_52314
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_52314 | 831 | 17.31 | Mlig455_052573, Mlig455_052587 | Neo: - Age: - |
TTC12 | Mlig455_052573 {REF} {Length: 3288} {Pfam: Tetratricopeptide repeat [PF00515.30, score=49.9]; Tetratricopeptide repeat [PF07719.19, score=33.5]; Tetratricopeptide repeat [PF13181.8, score=29.0]; Tetratricopeptide repeat [PF13176.8, score=28.7]} {Human: ENSG00000149292, TTC12, tetratricopeptide repeat domain 12, [Score=183, Expect=2e-48]} {Mouse: ENSMUSG00000040219, Ttc12, tetratricopeptide repeat domain 12, [RH, Score=144, Expect=2e-35]} {Dmel: FBgn0085326, CG34297, [RH, Score=75.1, Expect=8e-15]} {Smed: dd_Smed_v6_5778_0_1, dd_Smed_v6_5778_0_1, [RH, Score=131, Expect=1e-31]} {RNA1509_15244} {RNA1310_7499} {RNA815_10162.1} Mlig455_052587 {REF} {Length: 3290} {Pfam: Tetratricopeptide repeat [PF00515.30, score=49.9]; Tetratricopeptide repeat [PF07719.19, score=33.3]; Tetratricopeptide repeat [PF13181.8, score=29.0]; Tetratricopeptide repeat [PF13176.8, score=28.7]} {Human: ENSG00000149292, TTC12, tetratricopeptide repeat domain 12, [Score=183, Expect=2e-48]} {Mouse: ENSMUSG00000040219, Ttc12, tetratricopeptide repeat domain 12, [RH, Score=178, Expect=5e-47]} {Dmel: FBgn0085326, CG34297, [RH, Score=75.1, Expect=8e-15]} {Smed: dd_Smed_v6_5778_0_1, dd_Smed_v6_5778_0_1, [RH, Score=131, Expect=1e-31]} {RNA1509_15244} {RNA1310_7499, RNA1509_15244} {RNA1509_15244, RNA815_10162.1} |
Cumulative graph for MligTC455_52314
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.284 | 4.358 | 0.77275 | 1.00000 | |
| RegionR2 | 0.434 | 4.358 | 0.34529 | 0.73750 | |
| RegionR3 | 0.122 | 4.358 | 0.74734 | 1.00000 | |
| RegionR4 | 0.95 | 4.358 | 0.01747 | 0.09247 | |
| RegionR5 | 0.635 | 4.358 | 0.05697 | 0.20553 | |
| RegionR6 | 0.356 | 4.358 | 0.34726 | 0.93280 | |
| RegionR7 | -0.817 | 4.358 | 0.11178 | 0.63406 | |
| RegionR8 | -1.397 | 4.358 | 0.03241 | 0.35330 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.999 | 4.358 | 0.07748 | 0.76969 | |
| RegenerationR2 | -0.102 | 4.358 | 0.79601 | 0.98828 | |
| RegenerationR3 | 0.13 | 4.358 | 0.76942 | 0.97136 | |
| RegenerationR4 | -0.21 | 4.358 | 0.61796 | 0.92002 | |
| RegenerationR5 | -0.085 | 4.358 | 0.83372 | 0.99868 | |
| RegenerationR6 | 0.236 | 4.358 | 0.59072 | 0.86394 | |
| RegenerationBL | 0.178 | 4.358 | 0.76808 | 1.00000 | |
| RegenerationTP | 1.403 | 4.358 | 0.01429 | 0.20450 |
Genes with expression patterns similar to MligTC455_52314
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_52314 | 831 | 17.31 | Mlig455_052573, Mlig455_052587 | Neo: - Age: - |
TTC12 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_052573 {REF} {Length: 3288} {Pfam: Tetratricopeptide repeat [PF00515.30, score=49.9]; Tetratricopeptide repeat [PF07719.19, score=33.5]; Tetratricopeptide repeat [PF13181.8, score=29.0]; Tetratricopeptide repeat [PF13176.8, score=28.7]} {Human: ENSG00000149292, TTC12, tetratricopeptide repeat domain 12, [Score=183, Expect=2e-48]} {Mouse: ENSMUSG00000040219, Ttc12, tetratricopeptide repeat domain 12, [RH, Score=144, Expect=2e-35]} {Dmel: FBgn0085326, CG34297, [RH, Score=75.1, Expect=8e-15]} {Smed: dd_Smed_v6_5778_0_1, dd_Smed_v6_5778_0_1, [RH, Score=131, Expect=1e-31]} {RNA1509_15244} {RNA1310_7499} {RNA815_10162.1} Mlig455_052587 {REF} {Length: 3290} {Pfam: Tetratricopeptide repeat [PF00515.30, score=49.9]; Tetratricopeptide repeat [PF07719.19, score=33.3]; Tetratricopeptide repeat [PF13181.8, score=29.0]; Tetratricopeptide repeat [PF13176.8, score=28.7]} {Human: ENSG00000149292, TTC12, tetratricopeptide repeat domain 12, [Score=183, Expect=2e-48]} {Mouse: ENSMUSG00000040219, Ttc12, tetratricopeptide repeat domain 12, [RH, Score=178, Expect=5e-47]} {Dmel: FBgn0085326, CG34297, [RH, Score=75.1, Expect=8e-15]} {Smed: dd_Smed_v6_5778_0_1, dd_Smed_v6_5778_0_1, [RH, Score=131, Expect=1e-31]} {RNA1509_15244} {RNA1310_7499, RNA1509_15244} {RNA1509_15244, RNA815_10162.1} |
| 2. | MligTC455_05385 | 537 | 11.2 | Mlig455_069930 | Neo: - Age: - |
SMYD4 | 1.664 | 0.701 | - | - | - | - | 0.963 | Mlig455_069930 {REF} {Length: 1626} {TRANSSPLICED} {Pfam: SET domain [PF00856.30, score=39.1]} {Human: ENSG00000186532, SMYD4, SET and MYND domain containing 4, [RH, Score=128, Expect=9e-31]} {Mouse: ENSMUSG00000018809, Smyd4, SET and MYND domain containing 4, [RH, Score=148, Expect=1e-37]} {Dmel: FBgn0033633, Smyd4-3, SET and MYND domain containing, class 4, member 3, [Score=94.0, Expect=6e-20]} {RNA1509_24708, RNA1509_39831} {RNA1310_19741.1, RNA1509_24708, RNA1509_39831} {RNA1509_24708, RNA1509_39831, RNA815_7923} |
| 3. | MligTC455_52299 | 538 | 11.21 | Mlig455_008028 | Neo: - Age: Up-Down-Up Regeneration-upregulated R6: 1.840 Regeneration-enriched R6: 1.840 |
0.963 | - | - | - | 0.963 | - | - | Mlig455_008028 {REF} {Length: 2384} {RNA1509_7088} {RNA1310_7111} {RNA815_2388} | |
| 4. | MligTC455_25683 | 493 | 10.27 | Mlig455_005021 | Neo: - Age: - |
MED21 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_005021 {REF} {Length: 927} {TRANSSPLICED} {Pfam: Subunit 21 of Mediator complex [PF11221.10, score=76.5]} {Human: ENSG00000152944, MED21, mediator complex subunit 21, [RH, Score=94.4, Expect=7e-25]} {Mouse: ENSMUSG00000030291, Med21, mediator complex subunit 21, [RH, Score=95.1, Expect=2e-25]} {Dmel: FBgn0040020, MED21, Mediator complex subunit 21, [RH, Score=89.4, Expect=3e-23]} {Celegans: WBGene00007704, mdt-21, Mediator of RNA polymerase II transcription subunit 21, [RH, Score=48.5, Expect=8e-08]} {RNA1509_27093, RNA1509_40281} {RNA1310_34223, RNA1509_27093, RNA1509_40281} {RNA1509_27093, RNA1509_40281, RNA815_18272} |
| 5. | MligTC455_40136 | 198 | 4.13 | Mlig455_015773 | Neo: - Age: logFC(26M/2M)=0.466 |
IDNK | 0.955 | - | 0.955 | - | - | - | - | Mlig455_015773 {REF} {Length: 3709} {TRANSSPLICED} {Pfam: Shikimate kinase [PF01202.24, score=34.9]; AAA domain [PF13671.8, score=29.0]; AAA domain [PF13238.8, score=26.3]; AAA domain [PF13521.8, score=21.0]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=20.5]; AAA ATPase domain [PF13191.8, score=19.6]} {Human: ENSG00000148057, IDNK, IDNK, gluconokinase, [RH, Score=123, Expect=4e-35]} {Mouse: ENSMUSG00000050002, Idnk, idnK gluconokinase homolog (E. coli), [RH, Score=128, Expect=2e-37]} {Celegans: WBGene00017818, F26D11.1, Gluconokinase, [RH, Score=128, Expect=8e-38]} {Smed: dd_Smed_v6_14936_0_1, dd_Smed_v6_14936_0_1, [RH, Score=110, Expect=6e-31]} {RNA1509_48460} {RNA1310_24189, RNA1509_48460} {RNA1509_48460, RNA815_32058} |
| 6. | MligTC455_43256 | 1831 | 38.16 | Mlig455_009455, Mlig455_009467 | Neo: - Age: - |
TCF12 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_009455 {REF} {Length: 2539} {TRANSSPLICED} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=37.7]} {Human: ENSG00000140262, TCF12, transcription factor 12, [Score=145, Expect=5e-36]; ENSG00000071564, TCF3, transcription factor 3, [Score=142, Expect=5e-35]; ENSG00000196628, TCF4, transcription factor 4, [Score=142, Expect=5e-36]} {Mouse: ENSMUSG00000020167, Tcf3, transcription factor 3, [Score=144, Expect=4e-36]; ENSMUSG00000032228, Tcf12, transcription factor 12, [Score=144, Expect=2e-36]; ENSMUSG00000053477, Tcf4, transcription factor 4, [Score=142, Expect=5e-36]} {Dmel: FBgn0267821, da, daughterless, [Score=134, Expect=1e-32]} {Celegans: WBGene00001949, hlh-2, Helix Loop Helix, [RH, Score=104, Expect=6e-24]} {Smed: dd_Smed_v6_5579_0_1, dd_Smed_v6_5579_0_1, [Score=147, Expect=2e-37]} {RNA1509_39139, RNA1509_39299} {RNA1310_23539.2, RNA1509_39139, RNA1509_39299} {RNA1509_39139, RNA1509_39299, RNA815_9827.1} Mlig455_009467 {REF} {Length: 2515} {TRANSSPLICED} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=37.7]} {Human: ENSG00000140262, TCF12, transcription factor 12, [Score=144, Expect=2e-36]; ENSG00000196628, TCF4, transcription factor 4, [Score=142, Expect=1e-35]; ENSG00000071564, TCF3, transcription factor 3, [Score=141, Expect=6e-35]} {Mouse: ENSMUSG00000032228, Tcf12, transcription factor 12, [Score=144, Expect=7e-36]; ENSMUSG00000020167, Tcf3, transcription factor 3, [Score=144, Expect=6e-36]; ENSMUSG00000053477, Tcf4, transcription factor 4, [Score=142, Expect=6e-36]} {Dmel: FBgn0267821, da, daughterless, [Score=134, Expect=1e-32]} {Celegans: WBGene00001949, hlh-2, Helix Loop Helix, [RH, Score=104, Expect=7e-24]} {Smed: dd_Smed_v6_5579_0_1, dd_Smed_v6_5579_0_1, [Score=147, Expect=3e-37]} {RNA1509_39139} {RNA1310_23539.2} {RNA815_9827.1} |
| 7. | MligTC455_21299 | 575 | 11.99 | Mlig455_006101 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.198/0.02849 Regeneration-upregulated BL: 2.640 Regeneration-enriched BL: 2.640 |
SYNCRIP | 0.951 | - | 0.951 | - | - | - | - | Mlig455_006101 {REF} {Length: 3481} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=144.5]; Heterogeneous nuclear ribonucleoprotein Q acidic domain [PF18360.3, score=39.7]; Occluded RNA-recognition motif [PF16842.7, score=23.7]; RNA recognition motif [PF16367.7, score=23.2]} {Human: ENSG00000135316, SYNCRIP, synaptotagmin binding cytoplasmic RNA interacting protein, [RH, Score=373, Expect=4e-119]; ENSG00000282958, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [RH, Score=356, Expect=9e-112]; ENSG00000125944, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [RH, Score=356, Expect=9e-112]} {Mouse: ENSMUSG00000032423, Syncrip, synaptotagmin binding, cytoplasmic RNA interacting protein, [RH, Score=371, Expect=8e-119]; ENSMUSG00000066037, Hnrnpr, heterogeneous nuclear ribonucleoprotein R, [RH, Score=357, Expect=3e-112]} {Dmel: FBgn0038826, Syp, Syncrip, [RH, Score=406, Expect=1e-130]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [RH, Score=315, Expect=7e-97]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [Score=253, Expect=2e-73]} {RNA1509_41895} {RNA1310_12864} {RNA815_4749.1} |
| 8. | MligTC455_29741 | 452 | 9.41 | Mlig455_011625 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.646 |
COX15 | 0.951 | - | 0.951 | - | - | - | - | Mlig455_011625 {REF} {Length: 1980} {TRANSSPLICED} {Pfam: Cytochrome oxidase assembly protein [PF02628.17, score=312.0]} {Human: ENSG00000014919, COX15, cytochrome c oxidase assembly homolog COX15, [RH, Score=352, Expect=6e-118]} {Mouse: ENSMUSG00000040018, Cox15, cytochrome c oxidase assembly protein 15, [RH, Score=345, Expect=1e-115]} {Dmel: FBgn0034938, CG3803, [RH, Score=339, Expect=1e-113]} {Celegans: WBGene00011526, cox-15, Cytochrome OXidase assembly protein, [RH, Score=373, Expect=6e-127]} {Smed: dd_Smed_v6_5059_0_1, dd_Smed_v6_5059_0_1, [RH, Score=401, Expect=6e-138]} {RNA1509_14344} {RNA1310_20238} {RNA815_9503} |