TomoSeq data search

Data search

Results for MligTC455_52330

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_52330	294	6.12	Mlig455_045865	Neo: - Age: -		Mlig455_045865 {REF} {Length: 917} {TRANSSPLICED} {Pfam: SAM domain (Sterile alpha motif) [PF07647.19, score=51.9]; SAM domain (Sterile alpha motif) [PF00536.32, score=43.7]} {Mouse: ENSMUSG00000090812, Samd15, sterile alpha motif domain containing 15, [RH, Score=106, Expect=4e-27]} {Celegans: WBGene00006444, shn-1, SHaNk (SH3/ankyrin domain scaffold protein) related, [Score=48.9, Expect=3e-07]} {Smed: dd_Smed_v6_7783_0_1, dd_Smed_v6_7783_0_1, [RH, Score=150, Expect=2e-47]} {RNA1509_7432} {RNA1310_41932} {RNA815_20511}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_52330

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-5.41	3.07	0.27497	0.92564
RegionR2	0.916	3.07	0.52706	0.89917
RegionR3	0.741	3.07	0.55853	1.00000
RegionR4	2.19	3.07	0.14242	0.38644
RegionR5	-0.362	3.07	0.94603	1.00000
RegionR6	0.663	3.07	0.59780	1.00000
RegionR7	0.584	3.07	0.67342	1.00000
RegionR8	0.677	3.07	0.68274	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	6.194	3.07	0.21494	0.95256
RegenerationR2	0.612	3.07	0.61065	0.91974
RegenerationR3	0.649	3.07	0.61826	0.91583
RegenerationR4	0.837	3.07	0.52100	0.87961
RegenerationR5	2.277	3.07	0.08174	0.44343
RegenerationR6	-0.637	3.07	0.63825	0.89208
RegenerationBL	0.368	3.07	0.78398	1.00000
RegenerationTP	0.928	3.07	0.53655	0.92369

Genes with expression patterns similar to MligTC455_52330

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_52330	294	6.12	Mlig455_045865	Neo: - Age: -		5	-	1.000	1.000	1.000	1.000	1.000	Mlig455_045865 {REF} {Length: 917} {TRANSSPLICED} {Pfam: SAM domain (Sterile alpha motif) [PF07647.19, score=51.9]; SAM domain (Sterile alpha motif) [PF00536.32, score=43.7]} {Mouse: ENSMUSG00000090812, Samd15, sterile alpha motif domain containing 15, [RH, Score=106, Expect=4e-27]} {Celegans: WBGene00006444, shn-1, SHaNk (SH3/ankyrin domain scaffold protein) related, [Score=48.9, Expect=3e-07]} {Smed: dd_Smed_v6_7783_0_1, dd_Smed_v6_7783_0_1, [RH, Score=150, Expect=2e-47]} {RNA1509_7432} {RNA1310_41932} {RNA815_20511}
2.	MligTC455_41956	643	13.4	Mlig455_063402, Mlig455_068921	Neo: - Age: -	MMS19	0.98	-	-	-	-	0.980	-	Mlig455_063402 {REF} {Length: 3902} {TRANSSPLICED} {Pfam: Dos2-interacting transcription regulator of RNA-Pol-II [PF14500.8, score=227.0]; RNAPII transcription regulator C-terminal [PF12460.10, score=69.5]} {Human: ENSG00000155229, MMS19, MMS19 homolog, cytosolic iron-sulfur assembly component, [RH, Score=188, Expect=2e-48]} {Mouse: ENSMUSG00000025159, Mms19, MMS19 cytosolic iron-sulfur assembly component, [RH, Score=174, Expect=4e-44]} {Dmel: FBgn0037301, Mms19, [RH, Score=162, Expect=2e-40]} {Celegans: WBGene00016060, mms-19, Yeast MMS related, [RH, Score=113, Expect=2e-25]} {RNA1509_14461} {RNA1310_2838.1} {RNA815_8911} Mlig455_068921 {REF} {Length: 3555} {TRANSSPLICED} {Pfam: Dos2-interacting transcription regulator of RNA-Pol-II [PF14500.8, score=229.0]; RNAPII transcription regulator C-terminal [PF12460.10, score=68.5]} {Human: ENSG00000155229, MMS19, MMS19 homolog, cytosolic iron-sulfur assembly component, [RH, Score=191, Expect=3e-49]} {Mouse: ENSMUSG00000025159, Mms19, MMS19 cytosolic iron-sulfur assembly component, [RH, Score=178, Expect=3e-45]} {Dmel: FBgn0037301, Mms19, [RH, Score=162, Expect=2e-40]} {Celegans: WBGene00016060, mms-19, Yeast MMS related, [RH, Score=113, Expect=3e-25]} {RNA1509_14461} {RNA1310_2838.1} {RNA815_8911}
3.	MligTC455_16633	253	5.27	Mlig455_046630, Mlig455_046652	Neo: - Age: -		0.953	-	-	0.953	-	-	-	Mlig455_046630 {REF} {Length: 4714} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=37.3]} {RNA1509_59696} {RNA1310_22020} {RNA815_9247} Mlig455_046652 {REF} {Length: 2100} {RNA1310_21597.1} {RNA815_9247}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_52330

294

6.12

Mlig455_045865

Neo: -

Age: -

1.000

MligTC455_41956

643

13.4

Mlig455_063402, Mlig455_068921

Neo: -

Age: -

MMS19

0.98

0.980

Mlig455_063402 {REF} {Length: 3902} {TRANSSPLICED} {Pfam: Dos2-interacting transcription regulator of RNA-Pol-II [PF14500.8, score=227.0]; RNAPII transcription regulator C-terminal [PF12460.10, score=69.5]} {Human: ENSG00000155229, MMS19, MMS19 homolog, cytosolic iron-sulfur assembly component, [RH, Score=188, Expect=2e-48]} {Mouse: ENSMUSG00000025159, Mms19, MMS19 cytosolic iron-sulfur assembly component, [RH, Score=174, Expect=4e-44]} {Dmel: FBgn0037301, Mms19, [RH, Score=162, Expect=2e-40]} {Celegans: WBGene00016060, mms-19, Yeast MMS related, [RH, Score=113, Expect=2e-25]} {RNA1509_14461} {RNA1310_2838.1} {RNA815_8911}

Mlig455_068921 {REF} {Length: 3555} {TRANSSPLICED} {Pfam: Dos2-interacting transcription regulator of RNA-Pol-II [PF14500.8, score=229.0]; RNAPII transcription regulator C-terminal [PF12460.10, score=68.5]} {Human: ENSG00000155229, MMS19, MMS19 homolog, cytosolic iron-sulfur assembly component, [RH, Score=191, Expect=3e-49]} {Mouse: ENSMUSG00000025159, Mms19, MMS19 cytosolic iron-sulfur assembly component, [RH, Score=178, Expect=3e-45]} {Dmel: FBgn0037301, Mms19, [RH, Score=162, Expect=2e-40]} {Celegans: WBGene00016060, mms-19, Yeast MMS related, [RH, Score=113, Expect=3e-25]} {RNA1509_14461} {RNA1310_2838.1} {RNA815_8911}

MligTC455_16633

253

5.27

Mlig455_046630, Mlig455_046652

Neo: -

Age: -

0.953

Mlig455_046630 {REF} {Length: 4714} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=37.3]} {RNA1509_59696} {RNA1310_22020} {RNA815_9247}

Mlig455_046652 {REF} {Length: 2100} {RNA1310_21597.1} {RNA815_9247}