TomoSeq data search

Data search

Results for MligTC455_52344

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_52344	223	4.64	Mlig455_065930	Neo: - Age: logFC(26M/2M)=-0.322		Mlig455_065930 {REF} {Length: 1120} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_28692, RNA1509_29575, RNA1509_50414} {RNA1310_30911, RNA1509_28692, RNA1509_29575, RNA1509_50414} {RNA1509_28692, RNA1509_29575, RNA1509_50414, RNA815_15615}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_52344

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.214	2.574	0.17415	0.80056
RegionR2	0.905	2.574	0.21941	0.58762
RegionR3	1.265	2.574	0.02036	0.23987
RegionR4	-0.832	2.574	0.25094	0.55043
RegionR5	0.057	2.574	0.89343	1.00000
RegionR6	0.078	2.574	0.88439	1.00000
RegionR7	-0.249	2.574	0.72400	1.00000
RegionR8	0.991	2.574	0.17604	0.75560

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-4.878	2.574	0.38907	1.00000
RegenerationR2	-1.404	2.574	0.03719	0.31843
RegenerationR3	-2.111	2.574	0.00297	0.09612
RegenerationR4	-0.308	2.574	0.67542	0.94415
RegenerationR5	-1.864	2.574	0.00972	0.17568
RegenerationR6	-1.52	2.574	0.07411	0.34035
RegenerationBL	-3.463	2.574	0.01100	0.10653
RegenerationTP	-2.09	2.574	0.05190	0.37286

Genes with expression patterns similar to MligTC455_52344

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_52344	223	4.64	Mlig455_065930	Neo: - Age: logFC(26M/2M)=-0.322		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_065930 {REF} {Length: 1120} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_28692, RNA1509_29575, RNA1509_50414} {RNA1310_30911, RNA1509_28692, RNA1509_29575, RNA1509_50414} {RNA1509_28692, RNA1509_29575, RNA1509_50414, RNA815_15615}
2.	MligTC455_28847	131	2.73	Mlig455_045073	Neo: - Age: -		1.743	-	-	0.962	0.781	-	-	Mlig455_045073 {REF} {Length: 588} {RNA1509_57120} {RNA1310_63606.1} {RNA815_49827}
3.	MligTC455_49547	336	7	Mlig455_028613, Mlig455_028636	Neo: - Age: - Region-enriched R5: 2.009/0.00823	NR1D2	0.951	-	-	0.951	-	-	-	Mlig455_028613 {REF} {Length: 3434} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=49.3]; Zinc finger, C2H2 type [PF00096.28, score=22.5]} {Human: ENSG00000174738, NR1D2, nuclear receptor subfamily 1 group D member 2, [Score=65.5, Expect=2e-10]; ENSG00000148200, NR6A1, nuclear receptor subfamily 6 group A member 1, [Score=64.7, Expect=4e-11]; ENSG00000143257, NR1I3, nuclear receptor subfamily 1 group I member 3, [Score=64.3, Expect=2e-10]} {Mouse: ENSMUSG00000063972, Nr6a1, nuclear receptor subfamily 6, group A, member 1, [Score=66.6, Expect=7e-12]; ENSMUSG00000021779, Thrb, thyroid hormone receptor beta, [Score=63.9, Expect=3e-10]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [Score=63.2, Expect=5e-10]} {Celegans: WBGene00003607, nhr-8, Nuclear hormone receptor family member nhr-8, [Score=76.3, Expect=3e-14]} {Smed: dd_Smed_v6_14067_0_2, dd_Smed_v6_14067_0_2, [Score=75.5, Expect=5e-14]} {RNA1509_56197} {RNA1310_45687.1} {RNA815_27369.1} Mlig455_028636 {REF} {Length: 3603} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=48.7]; Zinc finger, C2H2 type [PF00096.28, score=22.3]} {Human: ENSG00000174738, NR1D2, nuclear receptor subfamily 1 group D member 2, [Score=68.6, Expect=2e-11]; ENSG00000132170, PPARG, peroxisome proliferator activated receptor gamma, [Score=67.4, Expect=9e-12]} {Mouse: ENSMUSG00000063972, Nr6a1, nuclear receptor subfamily 6, group A, member 1, [Score=67.4, Expect=3e-11]; ENSMUSG00000000440, Pparg, peroxisome proliferator activated receptor gamma, [Score=66.2, Expect=9e-12]; ENSMUSG00000020889, Nr1d1, nuclear receptor subfamily 1, group D, member 1, [Score=64.7, Expect=3e-10]; ENSMUSG00000021779, Thrb, thyroid hormone receptor beta, [Score=64.7, Expect=2e-10]; ENSMUSG00000036192, Rorb, RAR-related orphan receptor beta, [Score=64.3, Expect=3e-10]; ENSMUSG00000032238, Rora, RAR-related orphan receptor alpha, [Score=64.3, Expect=3e-10]} {Dmel: FBgn0031257, CG4133, [RH, Score=68.6, Expect=1e-11]} {Celegans: WBGene00003607, nhr-8, Nuclear hormone receptor family member nhr-8, [Score=74.7, Expect=9e-14]} {Smed: dd_Smed_v6_14067_0_2, dd_Smed_v6_14067_0_2, [Score=73.9, Expect=2e-13]} {RNA1509_36556} {RNA1310_20988} {RNA815_9740}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_52344

223

4.64

Mlig455_065930

Neo: -

Age: logFC(26M/2M)=-0.322

1.000

MligTC455_28847

131

2.73

Mlig455_045073

Neo: -

Age: -

1.743

0.962

0.781

Mlig455_045073 {REF} {Length: 588} {RNA1509_57120} {RNA1310_63606.1} {RNA815_49827}

MligTC455_49547

336

Mlig455_028613, Mlig455_028636

Neo: -

Age: -

Region-enriched R5: 2.009/0.00823

NR1D2

0.951

Mlig455_028613 {REF} {Length: 3434} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=49.3]; Zinc finger, C2H2 type [PF00096.28, score=22.5]} {Human: ENSG00000174738, NR1D2, nuclear receptor subfamily 1 group D member 2, [Score=65.5, Expect=2e-10]; ENSG00000148200, NR6A1, nuclear receptor subfamily 6 group A member 1, [Score=64.7, Expect=4e-11]; ENSG00000143257, NR1I3, nuclear receptor subfamily 1 group I member 3, [Score=64.3, Expect=2e-10]} {Mouse: ENSMUSG00000063972, Nr6a1, nuclear receptor subfamily 6, group A, member 1, [Score=66.6, Expect=7e-12]; ENSMUSG00000021779, Thrb, thyroid hormone receptor beta, [Score=63.9, Expect=3e-10]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [Score=63.2, Expect=5e-10]} {Celegans: WBGene00003607, nhr-8, Nuclear hormone receptor family member nhr-8, [Score=76.3, Expect=3e-14]} {Smed: dd_Smed_v6_14067_0_2, dd_Smed_v6_14067_0_2, [Score=75.5, Expect=5e-14]} {RNA1509_56197} {RNA1310_45687.1} {RNA815_27369.1}

Mlig455_028636 {REF} {Length: 3603} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=48.7]; Zinc finger, C2H2 type [PF00096.28, score=22.3]} {Human: ENSG00000174738, NR1D2, nuclear receptor subfamily 1 group D member 2, [Score=68.6, Expect=2e-11]; ENSG00000132170, PPARG, peroxisome proliferator activated receptor gamma, [Score=67.4, Expect=9e-12]} {Mouse: ENSMUSG00000063972, Nr6a1, nuclear receptor subfamily 6, group A, member 1, [Score=67.4, Expect=3e-11]; ENSMUSG00000000440, Pparg, peroxisome proliferator activated receptor gamma, [Score=66.2, Expect=9e-12]; ENSMUSG00000020889, Nr1d1, nuclear receptor subfamily 1, group D, member 1, [Score=64.7, Expect=3e-10]; ENSMUSG00000021779, Thrb, thyroid hormone receptor beta, [Score=64.7, Expect=2e-10]; ENSMUSG00000036192, Rorb, RAR-related orphan receptor beta, [Score=64.3, Expect=3e-10]; ENSMUSG00000032238, Rora, RAR-related orphan receptor alpha, [Score=64.3, Expect=3e-10]} {Dmel: FBgn0031257, CG4133, [RH, Score=68.6, Expect=1e-11]} {Celegans: WBGene00003607, nhr-8, Nuclear hormone receptor family member nhr-8, [Score=74.7, Expect=9e-14]} {Smed: dd_Smed_v6_14067_0_2, dd_Smed_v6_14067_0_2, [Score=73.9, Expect=2e-13]} {RNA1509_36556} {RNA1310_20988} {RNA815_9740}