TomoSeq data search

Data search

Results for MligTC455_52404

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_52404	477	9.93	Mlig455_034729	Neo: - Age: logFC(26M/2M)=0.278		Mlig455_034729 {REF} {Length: 2500} {TRANSSPLICED} {RNA1509_13184} {RNA1310_29952, RNA1509_13184} {RNA1509_13184, RNA815_7023}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_52404

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.366	3.617	0.78812	1.00000
RegionR2	-1.28	3.617	0.02563	0.17934
RegionR3	0.141	3.617	0.74826	1.00000
RegionR4	0.834	3.617	0.16459	0.42493
RegionR5	0.609	3.617	0.15650	0.41480
RegionR6	-0.782	3.617	0.14094	0.67326
RegionR7	0.465	3.617	0.42367	1.00000
RegionR8	-0.353	3.617	0.65817	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.423	3.617	0.52071	1.00000
RegenerationR2	1.662	3.617	0.00031	0.02366
RegenerationR3	0.102	3.617	0.84558	0.99640
RegenerationR4	0.68	3.617	0.20942	0.65712
RegenerationR5	0.673	3.617	0.15457	0.57459
RegenerationR6	1.049	3.617	0.07028	0.33204
RegenerationBL	0.441	3.617	0.47947	0.84479
RegenerationTP	0.734	3.617	0.24646	0.69372

Genes with expression patterns similar to MligTC455_52404

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_52404	477	9.93	Mlig455_034729	Neo: - Age: logFC(26M/2M)=0.278		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_034729 {REF} {Length: 2500} {TRANSSPLICED} {RNA1509_13184} {RNA1310_29952, RNA1509_13184} {RNA1509_13184, RNA815_7023}
2.	MligTC455_24068	254	5.29	Mlig455_026387	Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R5: 2.208/0.00708	MXD4	0.952	-	-	-	-	0.952	-	Mlig455_026387 {REF} {Length: 2589} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=30.3]} {Human: ENSG00000123933, MXD4, MAX dimerization protein 4, [RH, Score=55.1, Expect=2e-08]} {Mouse: ENSMUSG00000037235, Mxd4, Max dimerization protein 4, [RH, Score=58.9, Expect=8e-10]} {Dmel: FBgn0023215, Mnt, [RH, Score=58.2, Expect=6e-09]} {Celegans: WBGene00003163, mdl-1, MAD-Like; MAD-like-1 homolog, [Score=50.8, Expect=5e-07]} {Smed: dd_Smed_v6_4415_0_1, dd_Smed_v6_4415_0_1, [RH, Score=54.3, Expect=3e-08]} {RNA1509_24438} {RNA1310_17165} {RNA815_9997.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_52404

477

9.93

Mlig455_034729

Neo: -

Age: logFC(26M/2M)=0.278

1.000

Mlig455_034729 {REF} {Length: 2500} {TRANSSPLICED} {RNA1509_13184} {RNA1310_29952, RNA1509_13184} {RNA1509_13184, RNA815_7023}

MligTC455_24068

254

5.29

Mlig455_026387

Neo: Int S/G2/M

Age: Down-Up-Down

Region-enriched R5: 2.208/0.00708

MXD4

0.952

Mlig455_026387 {REF} {Length: 2589} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=30.3]} {Human: ENSG00000123933, MXD4, MAX dimerization protein 4, [RH, Score=55.1, Expect=2e-08]} {Mouse: ENSMUSG00000037235, Mxd4, Max dimerization protein 4, [RH, Score=58.9, Expect=8e-10]} {Dmel: FBgn0023215, Mnt, [RH, Score=58.2, Expect=6e-09]} {Celegans: WBGene00003163, mdl-1, MAD-Like; MAD-like-1 homolog, [Score=50.8, Expect=5e-07]} {Smed: dd_Smed_v6_4415_0_1, dd_Smed_v6_4415_0_1, [RH, Score=54.3, Expect=3e-08]} {RNA1509_24438} {RNA1310_17165} {RNA815_9997.1}