TomoSeq data search

Data search

Results for MligTC455_52506

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_52506	27	0.57	Mlig455_068375	Neo: - Age: -		Mlig455_068375 {REF} {Length: 777} {NoTransDecoderORF} {RNA1509_50388} {RNA1310_54430} {RNA815_13228}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_52506

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.924	0.782	0.99986	1.00000
RegionR2	1.622	0.782	1.00000	1.00000
RegionR3	1.385	0.782	0.99993	1.00000
RegionR4	-0.504	0.782	0.99993	1.00000
RegionR5	1.098	0.782	0.99998	1.00000
RegionR6	1.209	0.782	0.99994	1.00000
RegionR7	0.356	0.782	0.99997	1.00000
RegionR8	-1.243	0.782	0.99995	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.984	0.782	0.99999	1.00000
RegenerationR2	3.164	0.782	0.04332	0.34376
RegenerationR3	2.66	0.782	0.17679	0.61232
RegenerationR4	2.032	0.782	0.21393	0.66039
RegenerationR5	3.823	0.782	0.01781	0.23219
RegenerationR6	3.219	0.782	0.12708	0.43844
RegenerationBL	5.225	0.782	0.01567	0.13205
RegenerationTP	3.858	0.782	0.20258	0.64416

Genes with expression patterns similar to MligTC455_52506

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_52506	27	0.57	Mlig455_068375	Neo: - Age: -		3	-	-	-	1.000	1.000	1.000	Mlig455_068375 {REF} {Length: 777} {NoTransDecoderORF} {RNA1509_50388} {RNA1310_54430} {RNA815_13228}
2.	MligTC455_31678	40	0.83	Mlig455_067252	Neo: Irradiation Age: Up-Down-Down, logFC(26M/2M)=-0.848	PIF1	0.966	-	-	-	-	-	0.966	Mlig455_067252 {REF} {Length: 7057} {Pfam: PIF1-like helicase [PF05970.16, score=333.9]; Helitron helicase-like domain at N-terminus [PF14214.8, score=199.7]; AAA domain [PF13604.8, score=43.9]; Helicase [PF02689.16, score=23.6]; UvrD-like helicase C-terminal domain [PF13538.8, score=19.6]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=89.4, Expect=3e-17]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=91.3, Expect=4e-18]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=89.4, Expect=1e-17]} {Celegans: WBGene00019136, F59H6.5, [RH, Score=801, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=106, Expect=4e-23]} {RNA1509_7410} {RNA1310_3337} {RNA815_358.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_52506

0.57

Mlig455_068375

Neo: -

Age: -

1.000

Mlig455_068375 {REF} {Length: 777} {NoTransDecoderORF} {RNA1509_50388} {RNA1310_54430} {RNA815_13228}

MligTC455_31678

0.83

Mlig455_067252

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.848

PIF1

0.966

Mlig455_067252 {REF} {Length: 7057} {Pfam: PIF1-like helicase [PF05970.16, score=333.9]; Helitron helicase-like domain at N-terminus [PF14214.8, score=199.7]; AAA domain [PF13604.8, score=43.9]; Helicase [PF02689.16, score=23.6]; UvrD-like helicase C-terminal domain [PF13538.8, score=19.6]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=89.4, Expect=3e-17]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=91.3, Expect=4e-18]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=89.4, Expect=1e-17]} {Celegans: WBGene00019136, F59H6.5, [RH, Score=801, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=106, Expect=4e-23]} {RNA1509_7410} {RNA1310_3337} {RNA815_358.1}