TomoSeq data search

Data search

Results for MligTC455_52530

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_52530

1819

37.90

Mlig455_046859

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.494

Mlig455_046859 {REF} {Length: 1261} {TRANSSPLICED} {RNA1509_10993, RNA1509_24530, RNA1509_27119, RNA1509_39222} {RNA1310_12982.1, RNA1509_10993, RNA1509_24530, RNA1509_27119, RNA1509_39222} {RNA1509_10993, RNA1509_24530, RNA1509_27119, RNA1509_39222, RNA815_10633.1}

Cumulative graph for MligTC455_52530

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.84	5.387	0.17338	0.79926
RegionR2	0.057	5.387	0.83077	1.00000
RegionR3	-0.184	5.387	0.42233	0.94522
RegionR4	-0.29	5.387	0.26357	0.56719
RegionR5	-0.766	5.387	0.00073	0.00795
RegionR6	0.766	5.387	0.00030	0.01711
RegionR7	0.819	5.387	0.00144	0.04524
RegionR8	0.437	5.387	0.18312	0.76926

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-8.39	5.387	0.00605	0.37616
RegenerationR2	-0.075	5.387	0.74421	0.97142
RegenerationR3	-0.257	5.387	0.32863	0.75463
RegenerationR4	-0.085	5.387	0.74576	0.96971
RegenerationR5	0.304	5.387	0.23211	0.66559
RegenerationR6	-0.789	5.387	0.00178	0.04770
RegenerationBL	-0.108	5.387	0.68465	1.00000
RegenerationTP	-0.094	5.387	0.74733	1.00000

Genes with expression patterns similar to MligTC455_52530

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_52530	1819	37.9	Mlig455_046859	Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.494		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_046859 {REF} {Length: 1261} {TRANSSPLICED} {RNA1509_10993, RNA1509_24530, RNA1509_27119, RNA1509_39222} {RNA1310_12982.1, RNA1509_10993, RNA1509_24530, RNA1509_27119, RNA1509_39222} {RNA1509_10993, RNA1509_24530, RNA1509_27119, RNA1509_39222, RNA815_10633.1}
2.	MligTC455_52529	2079	43.31	Mlig455_046706	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.849 Region-enriched R7: 1.209/0.00023 Region-enriched R6: 1.021/0.00140 Regeneration-downregulated R6: -1.157 Regeneration-depleted R6: -1.157		4.45	0.880	0.861	0.768	0.970	0.971	-	Mlig455_046706 {REF} {Length: 1261} {TRANSSPLICED} {RNA1509_10993, RNA1509_11974} {RNA1310_12982.1, RNA1509_11974} {RNA1509_11974, RNA815_10633.1}
3.	MligTC455_39419	9898	206.2	Mlig455_027496	Neo: - Age: - Region-specific R6: 1.797 Region-enriched R6: 1.649/0.00000	VIL1	2.484	-	0.820	-	0.958	0.706	-	Mlig455_027496 {REF} {Length: 2220} {Pfam: Gelsolin repeat [PF00626.24, score=122.5]} {Human: ENSG00000127831, VIL1, villin 1, [Score=195, Expect=4e-58]; ENSG00000135407, AVIL, advillin, [Score=192, Expect=4e-54]} {Mouse: ENSMUSG00000026879, Gsn, gelsolin, [Score=192, Expect=1e-55]; ENSMUSG00000026175, Vil1, villin 1, [Score=191, Expect=4e-54]; ENSMUSG00000025432, Avil, advillin, [Score=186, Expect=3e-52]} {Dmel: FBgn0010225, Gel, Gelsolin, [Score=201, Expect=4e-58]} {Celegans: WBGene00010593, gsnl-1, Gelsolin-like protein 1, [Score=173, Expect=1e-49]} {Smed: dd_Smed_v6_1673_0_1, dd_Smed_v6_1673_0_1, [RH, Score=418, Expect=2e-146]} {RNA1509_1476, RNA1509_4857} {RNA1310_17869, RNA1509_1476, RNA1509_4857} {RNA1509_1476, RNA1509_4857, RNA815_6372}
4.	MligTC455_49781	581	12.11	Mlig455_055356	Neo: - Age: -	TAX1BP3	1.789	-	-	-	0.958	0.831	-	Mlig455_055356 {REF} {Length: 1672} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=48.4]; PDZ domain [PF17820.3, score=42.1]; PDZ domain [PF13180.8, score=28.9]} {Human: ENSG00000213977, TAX1BP3, Tax1 binding protein 3, [RH, Score=70.9, Expect=4e-16]} {Mouse: ENSMUSG00000040158, Tax1bp3, Tax1 (human T cell leukemia virus type I) binding protein 3, [RH, Score=71.2, Expect=2e-16]} {Dmel: FBgn0035148, CG3402, [RH, Score=88.6, Expect=3e-23]} {Celegans: WBGene00016678, C45G9.7, [RH, Score=90.5, Expect=4e-24]} {Smed: dd_Smed_v6_7732_0_1, dd_Smed_v6_7732_0_1, [Score=49.3, Expect=1e-07]} {RNA1509_14927, RNA1509_46994} {RNA1310_52397, RNA1509_14927, RNA1509_46994} {RNA1509_14927, RNA1509_46994, RNA815_26268.2}
5.	MligTC455_12807	2315	48.24	Mlig455_057247	Neo: - Age: logFC(26M/2M)=-0.271	CASP2	1.727	-	-	-	0.969	0.758	-	Mlig455_057247 {REF} {Length: 1726} {Pfam: Caspase domain [PF00656.24, score=118.8]} {Human: ENSG00000106144, CASP2, caspase 2, [Score=149, Expect=1e-40]} {Mouse: ENSMUSG00000029863, Casp2, caspase 2, [Score=151, Expect=1e-41]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=103, Expect=9e-25]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [RH, Score=161, Expect=3e-47]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=122, Expect=5e-33]} {RNA1509_3963} {RNA1310_16575.1} {RNA815_6350.1}
6.	MligTC455_30192	1664	34.66	Mlig455_026693	Neo: - Age: -	FOXRED2	1.699	-	-	-	0.973	0.726	-	Mlig455_026693 {REF} {Length: 18036} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=147.7]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=45.8]; HI0933-like protein [PF03486.16, score=31.1]; FAD dependent oxidoreductase [PF01266.26, score=26.0]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=25.0]; FAD binding domain [PF01494.21, score=22.8]; L-lysine 6-monooxygenase (NADPH-requiring) [PF13434.8, score=22.5]; Flavin containing amine oxidoreductase [PF01593.26, score=21.9]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=20.1]} {Human: ENSG00000100350, FOXRED2, FAD dependent oxidoreductase domain containing 2, [RH, Score=493, Expect=4e-167]} {Mouse: ENSMUSG00000016552, Foxred2, FAD-dependent oxidoreductase domain containing 2, [RH, Score=498, Expect=3e-169]} {Celegans: WBGene00001479, fmo-4, Flavin-containing monooxygenase, [Score=53.5, Expect=4e-07]} {Smed: dd_Smed_v6_12138_0_1, dd_Smed_v6_12138_0_1, [RH, Score=474, Expect=4e-161]} {RNA1509_13675, RNA1509_19929, RNA1509_38216, RNA1509_56501, RNA1509_8978} {RNA1310_861.1, RNA1509_19929, RNA1509_38216, RNA1509_56501, RNA1509_8978} {RNA1509_19929, RNA1509_38216, RNA1509_56501, RNA1509_8978, RNA815_570.1}
7.	MligTC455_46884	629	13.1	Mlig455_063831	Neo: - Age: logFC(26M/2M)=-0.481	CALM2	0.963	-	-	-	0.963	-	-	Mlig455_063831 {REF} {Length: 1397} {Pfam: EF hand [PF00036.34, score=117.6]; EF-hand domain pair [PF13499.8, score=101.1]; EF hand [PF13202.8, score=89.0]; EF-hand domain [PF13405.8, score=88.4]; EF-hand domain pair [PF13833.8, score=80.7]; EF-hand domain [PF14658.8, score=38.2]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=36.9]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=32.3]; Caleosin related protein [PF05042.15, score=31.6]; Uncharacterised protein family (UPF0154) [PF03672.15, score=25.7]; Dockerin type I domain [PF00404.20, score=24.1]; Tellurite resistance protein TerB [PF05099.15, score=20.9]; Family of unknown function (DUF5847) [PF19165.2, score=17.9]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=166, Expect=6e-52]; ENSG00000160014, CALM3, calmodulin 3, [Score=162, Expect=6e-51]; ENSG00000198668, CALM1, calmodulin 1, [Score=162, Expect=6e-51]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=163, Expect=1e-50]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=162, Expect=4e-51]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=162, Expect=4e-51]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=156, Expect=1e-48]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=162, Expect=3e-51]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=164, Expect=9e-52]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=164, Expect=7e-52]} {RNA1509_44262} {RNA1310_28246.2} {RNA815_26792}
8.	MligTC455_35822	2653	55.28	Mlig455_036751	Neo: - Age: -	MYL9	0.961	-	-	-	0.961	-	-	Mlig455_036751 {REF} {Length: 1513} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=54.0]; EF-hand domain [PF13405.8, score=50.7]; EF-hand domain pair [PF13499.8, score=49.8]; EF hand [PF13202.8, score=34.0]; EF-hand domain pair [PF13833.8, score=32.8]; EF-hand domain [PF08976.13, score=22.5]} {Human: ENSG00000101335, MYL9, myosin light chain 9, [RH, Score=213, Expect=4e-71]; ENSG00000118680, MYL12B, myosin light chain 12B, [RH, Score=213, Expect=4e-71]; ENSG00000101608, MYL12A, myosin light chain 12A, [RH, Score=213, Expect=9e-71]} {Mouse: ENSMUSG00000117098, AC154187.2, novel protein, [RH, Score=213, Expect=2e-71]; ENSMUSG00000034868, Myl12b, myosin, light chain 12B, regulatory, [RH, Score=213, Expect=3e-71]; ENSMUSG00000024048, Myl12a, myosin, light chain 12A, regulatory, non-sarcomeric, [RH, Score=213, Expect=2e-71]; ENSMUSG00000067818, Myl9, myosin, light polypeptide 9, regulatory, [RH, Score=212, Expect=1e-70]} {Dmel: FBgn0003514, sqh, spaghetti squash, [RH, Score=218, Expect=2e-73]} {Celegans: WBGene00003372, mlc-4, Myosin regulatory light chain, [RH, Score=217, Expect=4e-73]} {Smed: dd_Smed_v6_383_0_1, dd_Smed_v6_383_0_1, [RH, Score=254, Expect=1e-87]} {RNA1509_1375, RNA1509_16769, RNA1509_2323, RNA1509_2418, RNA1509_32870, RNA1509_44676, RNA1509_45916, RNA1509_50731, RNA1509_51470, RNA1509_6738, RNA1509_7577, RNA1509_9536} {RNA1310_20902.1, RNA1509_1375, RNA1509_16769, RNA1509_2323, RNA1509_2418, RNA1509_32870, RNA1509_44676, RNA1509_45916, RNA1509_50731, RNA1509_51470, RNA1509_6738, RNA1509_7577, RNA1509_9536} {RNA1509_1375, RNA1509_16769, RNA1509_2323, RNA1509_2418, RNA1509_32870, RNA1509_44676, RNA1509_45916, RNA1509_50731, RNA1509_51470, RNA1509_6738, RNA1509_7577, RNA1509_9536, RNA815_8312.1}
9.	MligTC455_45327	958	19.96	Mlig455_048751	Neo: - Age: -	CBY1	0.951	-	-	-	0.951	-	-	Mlig455_048751 {REF} {Length: 1634} {Pfam: Chibby family [PF14645.8, score=104.8]} {Human: ENSG00000100211, CBY1, chibby family member 1, beta catenin antagonist, [RH, Score=85.5, Expect=1e-21]} {Mouse: ENSMUSG00000022428, Cby1, chibby family member 1, beta catenin antagonist, [RH, Score=96.3, Expect=2e-26]} {Smed: dd_Smed_v6_11618_0_1, dd_Smed_v6_11618_0_1, [Score=55.5, Expect=7e-11]} {RNA1509_21398, RNA1509_41206, RNA1509_44548} {RNA1310_29300.1, RNA1509_21398, RNA1509_41206, RNA1509_44548} {RNA1509_21398, RNA1509_41206, RNA1509_44548, RNA815_13488}

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