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Results for MligTC455_52567

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_52567 107 2.23 Mlig455_052690

Neo: Int S/G2/M

Age: -

 SEH1L Mlig455_052690 {REF} {Length: 2549} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=57.7]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=26.7]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=21.8]} {Human: ENSG00000085415, SEH1L, SEH1 like nucleoporin, [RH, Score=301, Expect=4e-99]} {Mouse: ENSMUSG00000079614, Seh1l, SEH1-like (S. cerevisiae, [RH, Score=301, Expect=2e-99]} {Dmel: FBgn0033247, Nup44A, Nucleoporin at 44A, [RH, Score=260, Expect=1e-83]} {Celegans: WBGene00003804, npp-18, Nucleoporin SEH1, [RH, Score=216, Expect=1e-66]} {Smed: dd_Smed_v6_1922_0_1, dd_Smed_v6_1922_0_1, [RH, Score=246, Expect=3e-78]} {RNA1509_11782, RNA1509_54000} {RNA1310_12230.1, RNA1509_11782, RNA1509_54000} {RNA1509_11782, RNA1509_54000, RNA815_5598.1}

Cumulative graph for MligTC455_52567

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.312 2.022 0.89635 1.00000
RegionR2 0.124 2.022 0.89655 1.00000
RegionR3 0.424 2.022 0.54327 1.00000
RegionR4 0.317 2.022 0.70545 0.99262
RegionR5 0.754 2.022 0.20309 0.49524
RegionR6 0.409 2.022 0.58381 1.00000
RegionR7 -1.25 2.022 0.33808 0.97442
RegionR8 -0.468 2.022 0.74696 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -3.791 2.022 0.55889 1.00000
RegenerationR2 0.502 2.022 0.48541 0.86537
RegenerationR3 0.19 2.022 0.79583 0.98106
RegenerationR4 -0.642 2.022 0.43485 0.83331
RegenerationR5 0.183 2.022 0.76279 0.97634
RegenerationR6 0.9 2.022 0.22461 0.56971
RegenerationBL -0.311 2.022 0.83042 1.00000
RegenerationTP 0.649 2.022 0.64495 0.98599


Genes with expression patterns similar to MligTC455_52567

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_52567 107 2.23 Mlig455_052690

Neo: Int S/G2/M

Age: -

 SEH1L 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_052690 {REF} {Length: 2549} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=57.7]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=26.7]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=21.8]} {Human: ENSG00000085415, SEH1L, SEH1 like nucleoporin, [RH, Score=301, Expect=4e-99]} {Mouse: ENSMUSG00000079614, Seh1l, SEH1-like (S. cerevisiae, [RH, Score=301, Expect=2e-99]} {Dmel: FBgn0033247, Nup44A, Nucleoporin at 44A, [RH, Score=260, Expect=1e-83]} {Celegans: WBGene00003804, npp-18, Nucleoporin SEH1, [RH, Score=216, Expect=1e-66]} {Smed: dd_Smed_v6_1922_0_1, dd_Smed_v6_1922_0_1, [RH, Score=246, Expect=3e-78]} {RNA1509_11782, RNA1509_54000} {RNA1310_12230.1, RNA1509_11782, RNA1509_54000} {RNA1509_11782, RNA1509_54000, RNA815_5598.1}
2. MligTC455_19733 1211 25.23 Mlig455_011529, Mlig455_011605, Mlig455_050015

Neo: -

Age: -

 SRP14 1.744 - - - 0.950 - 0.794

Mlig455_011529 {REF} {Length: 2498} {Pfam: Signal recognition particle 14kD protein [PF02290.17, score=80.9]} {Human: ENSG00000140319, SRP14, signal recognition particle 14, [RH, Score=99.4, Expect=4e-27]} {Mouse: ENSMUSG00000009549, Srp14, signal recognition particle 14, [RH, Score=92.0, Expect=7e-25]} {Dmel: FBgn0038808, Srp14, Signal recognition particle protein 14, [RH, Score=60.8, Expect=9e-13]} {Celegans: WBGene00017799, F25G6.8, Signal recognition particle 14 kDa protein, [RH, Score=65.5, Expect=1e-14]} {Smed: dd_Smed_v6_3653_0_1, dd_Smed_v6_3653_0_1, [RH, Score=112, Expect=4e-33]} {RNA1509_12830} {RNA1310_47278.1} {RNA815_25613}

Mlig455_011605 {REF} {Length: 2466} {Pfam: Signal recognition particle 14kD protein [PF02290.17, score=80.9]} {Human: ENSG00000140319, SRP14, signal recognition particle 14, [RH, Score=99.4, Expect=4e-27]} {Mouse: ENSMUSG00000009549, Srp14, signal recognition particle 14, [RH, Score=92.0, Expect=7e-25]} {Dmel: FBgn0038808, Srp14, Signal recognition particle protein 14, [RH, Score=60.8, Expect=9e-13]} {Celegans: WBGene00017799, F25G6.8, Signal recognition particle 14 kDa protein, [RH, Score=65.5, Expect=1e-14]} {Smed: dd_Smed_v6_3653_0_1, dd_Smed_v6_3653_0_1, [RH, Score=112, Expect=4e-33]} {RNA1509_12830, RNA1509_35783, RNA1509_37152, RNA1509_44435} {RNA1310_47278.1, RNA1509_12830, RNA1509_35783, RNA1509_37152, RNA1509_44435} {RNA1509_12830, RNA1509_35783, RNA1509_37152, RNA1509_44435, RNA815_25613}

Mlig455_050015 {REF} {Length: 2672} {TRANSSPLICED} {Pfam: Signal recognition particle 14kD protein [PF02290.17, score=80.9]} {Human: ENSG00000140319, SRP14, signal recognition particle 14, [RH, Score=99.4, Expect=4e-27]} {Mouse: ENSMUSG00000009549, Srp14, signal recognition particle 14, [RH, Score=92.0, Expect=7e-25]} {Dmel: FBgn0038808, Srp14, Signal recognition particle protein 14, [RH, Score=60.8, Expect=9e-13]} {Celegans: WBGene00017799, F25G6.8, Signal recognition particle 14 kDa protein, [RH, Score=65.5, Expect=1e-14]} {Smed: dd_Smed_v6_3653_0_1, dd_Smed_v6_3653_0_1, [RH, Score=112, Expect=4e-33]} {RNA1509_12830} {RNA1310_51627} {RNA815_25613}
3. MligTC455_21058 197 4.11 Mlig455_012541

Neo: Int S/G2/M

Age: -

 PPAT 1.732 - - - 0.954 - 0.778 Mlig455_012541 {REF} {Length: 5957} {TRANSSPLICED} {Pfam: Glutamine amidotransferase domain [PF13522.8, score=52.7]; Glutamine amidotransferase domain [PF13537.8, score=48.5]; Ring finger domain [PF13639.8, score=39.7]; 3' exoribonuclease family, domain 2 [PF03725.17, score=32.3]; 3' exoribonuclease family, domain 1 [PF01138.23, score=31.9]; RING-H2 zinc finger domain [PF12678.9, score=26.5]; Phosphoribosyl transferase domain [PF00156.29, score=26.4]; RING-type zinc-finger [PF13445.8, score=25.8]; zinc-RING finger domain [PF14634.8, score=24.6]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=23.6]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=22.2]; Glutamine amidotransferases class-II [PF13230.8, score=20.4]; Domain of unknown function (DUF4620) [PF15399.8, score=20.4]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=20.2]} {Human: ENSG00000128059, PPAT, phosphoribosyl pyrophosphate amidotransferase, [RH, Score=530, Expect=3e-173]} {Mouse: ENSMUSG00000029246, Ppat, phosphoribosyl pyrophosphate amidotransferase, [RH, Score=529, Expect=3e-173]} {Dmel: FBgn0041194, Prat2, Phosphoribosylamidotransferase 2, [RH, Score=505, Expect=5e-164]} {Celegans: WBGene00011407, ppat-1, Amidophosphoribosyltransferase, [RH, Score=399, Expect=2e-125]} {Smed: dd_Smed_v6_10667_0_1, dd_Smed_v6_10667_0_1, [RH, Score=512, Expect=2e-167]} {RNA1509_41149} {RNA1310_4226.1} {RNA815_5739}
4. MligTC455_41081 56 1.17 Mlig455_064084

Neo: Int S/G2/M

Age: Up-Down-Down

 KIF20A 1.68 - - - - 0.962 0.718 Mlig455_064084 {REF} {Length: 7806} {Pfam: Kinesin motor domain [PF00225.25, score=289.0]; Microtubule binding [PF16796.7, score=46.0]} {Human: ENSG00000112984, KIF20A, kinesin family member 20A, [RH, Score=308, Expect=2e-87]; ENSG00000138182, KIF20B, kinesin family member 20B, [RH, Score=304, Expect=1e-82]} {Mouse: ENSMUSG00000024795, Kif20b, kinesin family member 20B, [RH, Score=307, Expect=5e-84]; ENSMUSG00000003779, Kif20a, kinesin family member 20A, [RH, Score=306, Expect=1e-86]} {Dmel: FBgn0011692, pav, pavarotti, [Score=201, Expect=2e-52]} {Celegans: WBGene00006974, zen-4, Kinesin-like protein, [Score=193, Expect=2e-50]} {Smed: dd_Smed_v6_13972_0_2, dd_Smed_v6_13972_0_2, [RH, Score=281, Expect=7e-78]} {RNA1509_17742} {RNA1310_1227.1} {RNA815_3788}
5. MligTC455_44514 387 8.07 Mlig455_042236

Neo: -

Age: -

 TPR 0.967 - - - 0.967 - - Mlig455_042236 {REF} {Length: 7958} {Pfam: TPR/MLP1/MLP2-like protein [PF07926.14, score=37.2]} {Human: ENSG00000047410, TPR, translocated promoter region, nuclear basket protein, [Score=243, Expect=2e-63]} {Mouse: ENSMUSG00000006005, Tpr, translocated promoter region, nuclear basket protein, [Score=233, Expect=9e-61]} {Dmel: FBgn0013756, Mtor, Megator, [Score=99.0, Expect=5e-20]} {Smed: dd_Smed_v6_2899_0_1, dd_Smed_v6_2899_0_1, [RH, Score=164, Expect=3e-40]} {RNA1509_5248} {RNA1310_1101.1} {RNA815_2269}
6. MligTC455_11079 40 0.83 Mlig455_053265

Neo: -

Age: -

 0.966 - - - - 0.966 - Mlig455_053265 {REF} {Length: 2494} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=19.2]} {RNA1509_59151} {RNA1310_53403} {RNA815_40035}
7. MligTC455_28649 93 1.94 Mlig455_048260

Neo: -

Age: -

 TRPM3 0.966 - - - 0.966 - - Mlig455_048260 {REF} {Length: 6001} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=77.0]; Ankyrin repeat [PF13606.8, score=68.0]; Ankyrin repeats (many copies) [PF13637.8, score=66.3]; Ankyrin repeat [PF00023.32, score=56.2]; Ion transport protein [PF00520.33, score=53.5]; Ankyrin repeats (many copies) [PF13857.8, score=45.8]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=158, Expect=2e-38]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=162, Expect=1e-39]} {Dmel: FBgn0005614, trpl, transient receptor potential-like, [Score=80.1, Expect=1e-14]} {Celegans: WBGene00001796, gtl-2, Gon-Two Like (TRP subfamily), [Score=106, Expect=8e-23]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [Score=194, Expect=4e-50]} {RNA1509_8039} {RNA1310_1471} {RNA815_562}
8. MligTC455_53574 349 7.28 Mlig455_000870

Neo: -

Age: -

 TMEM184C 0.965 - - - - 0.965 - Mlig455_000870 {REF} {Length: 3063} {Pfam: Organic solute transporter Ostalpha [PF03619.18, score=300.2]} {Human: ENSG00000164168, TMEM184C, transmembrane protein 184C, [RH, Score=417, Expect=6e-143]} {Mouse: ENSMUSG00000031617, Tmem184c, transmembrane protein 184C, [RH, Score=402, Expect=1e-134]} {Dmel: FBgn0032172, CG5850, [RH, Score=367, Expect=5e-123]} {Celegans: WBGene00009574, F40E10.6, [Score=183, Expect=4e-53]} {Smed: dd_Smed_v6_3881_1_1, dd_Smed_v6_3881_1_1, [Score=159, Expect=1e-44]} {RNA1509_50063} {RNA1310_31961, RNA1509_50063} {RNA1509_50063, RNA815_7530.1}
9. MligTC455_13659 277 5.77 Mlig455_060046, Mlig455_063498

Neo: Irradiation

Age: Up-Up-Up, logFC(26M/2M)=0.925

Region-enriched R5: 4.130/0.00000

 0.961 - - - 0.961 - -

Mlig455_060046 {REF} {Length: 4212} {RNA1509_57337} {RNA1310_9265, RNA1509_57337} {RNA1509_57337, RNA815_13115}

Mlig455_063498 {REF} {Length: 1365} {NoTransDecoderORF} {RNA1509_57337} {RNA1310_54209} {RNA815_29261}
10. MligTC455_50938 115 2.39 Mlig455_047265

Neo: -

Age: -

 0.961 - - - 0.961 - - Mlig455_047265 {REF} {Length: 364} {NoTransDecoderORF} {RNA1310_80448} {RNA815_41005}
11. MligTC455_51998 172 3.59 Mlig455_003553

Neo: Irradiation

Age: Down-Down-Up

Region-specific R5: 3.106

Region-enriched R5: 2.254/0.00001

 POP1 0.957 - - - 0.957 - - Mlig455_003553 {REF} {Length: 2680} {TRANSSPLICED} {Pfam: Ribonucleases P/MRP protein subunit POP1 [PF06978.13, score=104.6]} {Human: ENSG00000104356, POP1, POP1 homolog, ribonuclease P/MRP subunit, [RH, Score=133, Expect=9e-32]} {Mouse: ENSMUSG00000022325, Pop1, processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae), [RH, Score=128, Expect=2e-30]} {Dmel: FBgn0026702, l(1)G0045, lethal (1) G0045, [RH, Score=106, Expect=2e-23]} {Celegans: WBGene00015486, C05D11.9, [RH, Score=97.4, Expect=7e-21]} {Smed: dd_Smed_v6_10390_0_1, dd_Smed_v6_10390_0_1, [RH, Score=131, Expect=4e-32]} {RNA1509_32883, RNA1509_55731} {RNA1310_12703, RNA1509_32883, RNA1509_55731} {RNA1509_32883, RNA1509_55731, RNA815_10208}
12. MligTC455_50939 121 2.51 Mlig455_069347

Neo: -

Age: Down-Up-Down

 0.954 - - - 0.954 - - Mlig455_069347 {REF} {Length: 1851} {TRANSSPLICED} {RNA1509_55083} {RNA1310_23759} {RNA815_14866}
13. MligTC455_40537 146 3.05 Mlig455_008775

Neo: -

Age: Down-Up-Up

 0.953 - - - - 0.953 - Mlig455_008775 {REF} {Length: 1212} {RNA1509_53279} {RNA1310_34746, RNA1509_53279} {RNA1509_53279, RNA815_35566}

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