Data search
Results for MligTC455_52637
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_52637 | 16 | 0.34 | Mlig455_044384 | Neo: - Age: - |
Mlig455_044384 {REF} {Length: 543} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=18.3]} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=98.2, Expect=7e-25]} {RNA1310_64336} {RNA815_53737} |
Cumulative graph for MligTC455_52637
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_52637
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_52637 | 16 | 0.34 | Mlig455_044384 | Neo: - Age: - |
1 | - | - | - | - | - | 1.000 | Mlig455_044384 {REF} {Length: 543} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=18.3]} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=98.2, Expect=7e-25]} {RNA1310_64336} {RNA815_53737} | |
| 2. | MligTC455_01023 | 4 | 0.09 | Mlig455_000797 | Neo: - Age: - |
0.967 | - | - | - | - | - | 0.967 | Mlig455_000797 {REF} {Length: 317} {NoTransDecoderORF} | |
| 3. | MligTC455_04354 | 18 | 0.38 | Mlig455_040415 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.644 Region-enriched R5: 4.066/0.01997 |
0.958 | - | - | - | - | - | 0.958 | Mlig455_040415 {REF} {Length: 1628} {Pfam: BEN domain [PF10523.11, score=26.2]} {Smed: dd_Smed_v6_7370_0_1, dd_Smed_v6_7370_0_1, [Score=91.7, Expect=3e-20]} {RNA1310_24027.3} {RNA815_22290} |
Berezikov Lab - 2020-2021 © ERIBA