Data search


search
Exact
Search

Results for MligTC455_52700

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_52700 140 2.91 Mlig455_038857

Neo: -

Age: -

Mlig455_038857 {REF} {Length: 1934} {RNA1509_55277} {RNA1310_20064} {RNA815_15327}

Cumulative graph for MligTC455_52700

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -7.781 2.342 0.02530 0.42216
RegionR2 1.785 2.342 0.08525 0.35878
RegionR3 0.933 2.342 0.29871 0.84124
RegionR4 -0.051 2.342 0.87549 1.00000
RegionR5 1.571 2.342 0.02207 0.10415
RegionR6 0.502 2.342 0.60478 1.00000
RegionR7 0.624 2.342 0.58786 1.00000
RegionR8 2.416 2.342 0.01934 0.27022

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.849 2.342 1.00000 1.00000
RegenerationR2 -0.263 2.342 0.69928 0.95613
RegenerationR3 -0.049 2.342 0.93240 1.00000
RegenerationR4 0.022 2.342 0.95897 1.00000
RegenerationR5 -1.448 2.342 0.01575 0.21769
RegenerationR6 1.144 2.342 0.12453 0.43367
RegenerationBL 0.369 2.342 0.70553 1.00000
RegenerationTP -1.797 2.342 0.17740 0.61180


Genes with expression patterns similar to MligTC455_52700

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_52700 140 2.91 Mlig455_038857

Neo: -

Age: -

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_038857 {REF} {Length: 1934} {RNA1509_55277} {RNA1310_20064} {RNA815_15327}
2. MligTC455_36715 144 3 Mlig455_017394

Neo: -

Age: -

0.955 - - 0.955 - - - Mlig455_017394 {REF} {Length: 1785} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=37.3]} {Celegans: WBGene00018860, vpat-1, Vesicular PolyAmine Transporter, [Score=55.8, Expect=2e-10]} {RNA1509_52459} {RNA1310_44876.2} {RNA815_11724.2}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA