TomoSeq data search

Data search

Results for MligTC455_52729

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_52729	110	2.29	Mlig455_032125	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.968		Mlig455_032125 {REF} {Length: 2195} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=59.2]; Capsular polysaccharide synthesis protein [PF05704.14, score=19.6]; TcdA/TcdB catalytic glycosyltransferase domain [PF12919.9, score=19.5]} {Smed: dd_Smed_v6_6819_0_2, dd_Smed_v6_6819_0_2, [Score=132, Expect=1e-35]} {RNA1509_41314} {RNA1310_23181} {RNA815_9728}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_52729

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-4.444	2.008	0.39647	1.00000
RegionR2	2.932	2.008	0.00426	0.05800
RegionR3	1.213	2.008	0.20575	0.74582
RegionR4	-1.001	2.008	0.98734	1.00000
RegionR5	-2.515	2.008	0.99985	1.00000
RegionR6	1.781	2.008	0.04200	0.38430
RegionR7	1.496	2.008	0.27993	0.91256
RegionR8	0.539	2.008	0.75329	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.06	2.008	0.99997	1.00000
RegenerationR2	0.075	2.008	0.89172	1.00000
RegenerationR3	-0.31	2.008	0.67971	0.94017
RegenerationR4	0.511	2.008	0.54323	0.88983
RegenerationR5	2.837	2.008	0.00114	0.05604
RegenerationR6	-0.749	2.008	0.29983	0.64985
RegenerationBL	1.245	2.008	0.19347	0.52905
RegenerationTP	0.553	2.008	0.67095	1.00000

Genes with expression patterns similar to MligTC455_52729

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_52729	110	2.29	Mlig455_032125	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.968		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_032125 {REF} {Length: 2195} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=59.2]; Capsular polysaccharide synthesis protein [PF05704.14, score=19.6]; TcdA/TcdB catalytic glycosyltransferase domain [PF12919.9, score=19.5]} {Smed: dd_Smed_v6_6819_0_2, dd_Smed_v6_6819_0_2, [Score=132, Expect=1e-35]} {RNA1509_41314} {RNA1310_23181} {RNA815_9728}
2.	MligTC455_53562	57	1.2	Mlig455_001432	Neo: - Age: -		0.964	-	-	-	0.964	-	-	Mlig455_001432 {REF} {Length: 962} {NoTransDecoderORF} {tRNA: Arg(TCT), score=79.0} {RNA1509_52154} {RNA1310_124435}
3.	MligTC455_41453	156	3.25	Mlig455_007164	Neo: - Age: -	CALM2	0.951	-	-	-	0.951	-	-	Mlig455_007164 {REF} {Length: 2262} {Pfam: EF hand [PF00036.34, score=122.0]; EF-hand domain pair [PF13499.8, score=113.0]; EF-hand domain [PF13405.8, score=93.4]; EF-hand domain pair [PF13833.8, score=84.0]; EF hand [PF13202.8, score=82.9]; EF-hand domain [PF14658.8, score=47.6]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=33.7]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=25.0]; Uncharacterised protein family (UPF0154) [PF03672.15, score=20.5]; Cache domain [PF08269.13, score=18.3]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=177, Expect=2e-56]; ENSG00000198668, CALM1, calmodulin 1, [Score=176, Expect=6e-57]; ENSG00000160014, CALM3, calmodulin 3, [Score=176, Expect=7e-57]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [Score=176, Expect=5e-57]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=176, Expect=5e-57]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=176, Expect=5e-57]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=168, Expect=9e-54]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=175, Expect=1e-56]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=175, Expect=1e-56]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=175, Expect=1e-56]} {RNA1509_12043} {RNA1310_34453.1} {RNA815_19758.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_52729

110

2.29

Mlig455_032125

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.968

1.000

MligTC455_53562

1.2

Mlig455_001432

Neo: -

Age: -

0.964

Mlig455_001432 {REF} {Length: 962} {NoTransDecoderORF} {tRNA: Arg(TCT), score=79.0} {RNA1509_52154} {RNA1310_124435}

MligTC455_41453

156

3.25

Mlig455_007164

Neo: -

Age: -

CALM2

0.951

Mlig455_007164 {REF} {Length: 2262} {Pfam: EF hand [PF00036.34, score=122.0]; EF-hand domain pair [PF13499.8, score=113.0]; EF-hand domain [PF13405.8, score=93.4]; EF-hand domain pair [PF13833.8, score=84.0]; EF hand [PF13202.8, score=82.9]; EF-hand domain [PF14658.8, score=47.6]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=33.7]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=25.0]; Uncharacterised protein family (UPF0154) [PF03672.15, score=20.5]; Cache domain [PF08269.13, score=18.3]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=177, Expect=2e-56]; ENSG00000198668, CALM1, calmodulin 1, [Score=176, Expect=6e-57]; ENSG00000160014, CALM3, calmodulin 3, [Score=176, Expect=7e-57]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [Score=176, Expect=5e-57]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=176, Expect=5e-57]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=176, Expect=5e-57]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=168, Expect=9e-54]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=175, Expect=1e-56]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=175, Expect=1e-56]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=175, Expect=1e-56]} {RNA1509_12043} {RNA1310_34453.1} {RNA815_19758.1}