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Results for MligTC455_52744

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_52744 6 0.13 Mlig455_036091

Neo: -

Age: -

 RPA1 Mlig455_036091 {REF} {Length: 1331} {Pfam: Replication protein A OB domain [PF16900.7, score=66.0]} {Human: ENSG00000132383, RPA1, replication protein A1, [Score=75.9, Expect=3e-15]} {Mouse: ENSMUSG00000000751, Rpa1, replication protein A1, [Score=66.2, Expect=3e-12]} {RNA1310_86029}

Cumulative graph for MligTC455_52744

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_52744

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_52744 6 0.13 Mlig455_036091

Neo: -

Age: -

 RPA1 1 - - - - 1.000 - Mlig455_036091 {REF} {Length: 1331} {Pfam: Replication protein A OB domain [PF16900.7, score=66.0]} {Human: ENSG00000132383, RPA1, replication protein A1, [Score=75.9, Expect=3e-15]} {Mouse: ENSMUSG00000000751, Rpa1, replication protein A1, [Score=66.2, Expect=3e-12]} {RNA1310_86029}
2. MligTC455_42202 406 8.46 Mlig455_026421, Mlig455_044774, Mlig455_053672

Neo: Irradiation

Age: -

Region-specific R4: 4.693

Region-enriched R4: 2.714/0.00088

 0.973 - - - - 0.973 -

Mlig455_026421 {REF} {Length: 2201} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=31.0]} {RNA1509_37532} {RNA1310_18370} {RNA815_5248}

Mlig455_044774 {REF} {Length: 3378} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=31.0]} {RNA1509_37532} {RNA1310_18370} {RNA815_5248}

Mlig455_053672 {REF} {Length: 2076} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=31.0]} {RNA1509_37532, RNA1509_44705, RNA1509_8936} {RNA1310_18370, RNA1509_44705, RNA1509_8936} {RNA1509_44705, RNA1509_8936, RNA815_5248}
3. MligTC455_17290 80 1.66 Mlig455_045654

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.676

Region-enriched R4: 3.109/0.01782

 0.969 - - - - 0.969 - Mlig455_045654 {REF} {Length: 2037} {Pfam: Outer membrane protein (OmpH-like) [PF03938.16, score=19.1]} {RNA1509_31195, RNA1509_49014} {RNA1310_15853.1, RNA1509_49014} {RNA1509_49014, RNA815_11413}
4. MligTC455_20507 213 4.44 Mlig455_004063

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.706

Region-specific R4: 5.613

Region-enriched R4: 3.929/0.00000

Regeneration-downregulated R4: -2.459

Regeneration-depleted R4: -2.459

 TTLL10 0.961 - - - - 0.961 - Mlig455_004063 {REF} {Length: 2811} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=138.8]; YheC/D like ATP-grasp [PF14398.8, score=35.2]; RimK-like ATP-grasp domain [PF08443.13, score=20.0]} {Human: ENSG00000162571, TTLL10, tubulin tyrosine ligase like 10, [Score=164, Expect=2e-42]} {Mouse: ENSMUSG00000029074, Ttll10, tubulin tyrosine ligase-like family, member 10, [Score=174, Expect=5e-46]} {Dmel: FBgn0030823, CG8918, [Score=105, Expect=8e-24]} {Celegans: WBGene00044187, ttll-9, Tubulin Tyrosine Ligase Like, [Score=84.3, Expect=4e-17]} {Smed: dd_Smed_v6_14858_0_1, dd_Smed_v6_14858_0_1, [Score=184, Expect=4e-51]} {RNA1509_2026, RNA1509_31811} {RNA1310_7186, RNA1509_31811} {RNA1509_31811, RNA815_863}
5. MligTC455_07007 31 0.64 Mlig455_012280, Mlig455_026570

Neo: -

Age: -

 0.955 - - - - 0.955 -

Mlig455_012280 {REF} {Length: 443} {RNA1509_41966} {RNA1310_20375} {RNA815_18013.1}

Mlig455_026570 {REF} {Length: 210} {NoTransDecoderORF} {RNA1509_41966} {RNA1310_20375} {RNA815_18013.1}
6. MligTC455_02510 76 1.58 Mlig455_010331

Neo: -

Age: logFC(26M/2M)=-0.357

Region-enriched R4: 4.450/0.00001

 UBC 0.954 - - - - 0.954 - Mlig455_010331 {REF} {Length: 2262} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=60.8]; Ubiquitin family [PF00240.25, score=28.6]; Ubiquitin-like domain [PF14560.8, score=24.1]} {Human: ENSG00000150991, UBC, ubiquitin C, [Score=49.3, Expect=1e-06]; ENSG00000170315, UBB, ubiquitin B, [Score=49.3, Expect=2e-06]} {Mouse: ENSMUSG00000008348, Ubc, ubiquitin C, [Score=49.3, Expect=3e-06]; ENSMUSG00000019505, Ubb, ubiquitin B, [Score=48.1, Expect=1e-05]} {Smed: dd_Smed_v6_458_0_2, dd_Smed_v6_458_0_2, [Score=44.3, Expect=7e-06]} {RNA1509_22361} {RNA1310_28812} {RNA815_12500.1}
7. MligTC455_21709 21 0.43 Mlig455_037997

Neo: -

Age: logFC(26M/2M)=1.185

 0.954 - - - - 0.954 - Mlig455_037997 {REF} {Length: 2855} {Pfam: Domain of unknown function (DUF4573) [PF15140.8, score=31.6]} {RNA1310_25743.1}
8. MligTC455_22056 44 0.91 Mlig455_002130

Neo: -

Age: Up-Down-Up

 DHX38 0.954 - - - - 0.954 - Mlig455_002130 {REF} {Length: 5123} {Pfam: WWE domain [PF02825.22, score=85.5]; Helicase conserved C-terminal domain [PF00271.33, score=47.2]; Helicase associated domain (HA2) [PF04408.25, score=27.8]} {Human: ENSG00000140829, DHX38, DEAH-box helicase 38, [Score=258, Expect=2e-70]; ENSG00000067596, DHX8, DEAH-box helicase 8, [Score=248, Expect=6e-67]} {Mouse: ENSMUSG00000037993, Dhx38, DEAH (Asp-Glu-Ala-His) box polypeptide 38, [Score=259, Expect=1e-70]; ENSMUSG00000034931, Dhx8, DEAH (Asp-Glu-Ala-His) box polypeptide 8, [Score=248, Expect=5e-67]} {Dmel: FBgn0086895, pea, peanuts, [Score=243, Expect=1e-65]} {Celegans: WBGene00003389, mog-1, Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1, [Score=265, Expect=4e-73]} {Smed: dd_Smed_v6_9191_0_1, dd_Smed_v6_9191_0_1, [Score=249, Expect=1e-71]} {RNA1509_29316} {RNA1310_42675} {RNA815_24379}

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