TomoSeq data search

Data search

Results for MligTC455_52801

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_52801	16	0.32	Mlig455_009040	Neo: - Age: -	PRDM14	Mlig455_009040 {REF} {Length: 3440} {Pfam: Zinc-finger double domain [PF13465.8, score=60.8]; Zinc finger, C2H2 type [PF00096.28, score=53.1]; C2H2-type zinc finger [PF13894.8, score=37.1]} {Human: ENSG00000147596, PRDM14, PR/SET domain 14, [RH, Score=289, Expect=2e-89]} {Mouse: ENSMUSG00000042414, Prdm14, PR domain containing 14, [RH, Score=278, Expect=2e-85]} {Dmel: FBgn0266450, Kr-h1, Kruppel homolog 1, [Score=120, Expect=4e-28]} {Celegans: WBGene00018567, F47E1.3, [RH, Score=275, Expect=6e-84]} {Smed: dd_Smed_v6_36618_0_1, dd_Smed_v6_36618_0_1, [RH, Score=277, Expect=2e-90]} {RNA1310_74120}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_52801

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.559	0.79	0.99980	1.00000
RegionR2	-0.8	0.79	0.99829	1.00000
RegionR3	-1.371	0.79	0.99969	1.00000
RegionR4	3.532	0.79	0.11559	0.33861
RegionR5	1.336	0.79	0.34503	0.69333
RegionR6	-1.459	0.79	0.99941	1.00000
RegionR7	-1.264	0.79	0.99968	1.00000
RegionR8	-0.532	0.79	0.99964	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.578	0.79	0.99978	1.00000
RegenerationR2	0.705	0.79	0.82177	0.99544
RegenerationR3	1.478	0.79	0.85784	1.00000
RegenerationR4	-2.192	0.79	0.39279	0.80891
RegenerationR5	-1.272	0.79	0.49453	0.85567
RegenerationR6	0.778	0.79	0.84501	0.99799
RegenerationBL	-1.19	0.79	1.00000	1.00000
RegenerationTP	0.959	0.79	0.96392	1.00000

Genes with expression patterns similar to MligTC455_52801

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_52801	16	0.32	Mlig455_009040	Neo: - Age: -	PRDM14	2	-	-	1.000	-	-	1.000	Mlig455_009040 {REF} {Length: 3440} {Pfam: Zinc-finger double domain [PF13465.8, score=60.8]; Zinc finger, C2H2 type [PF00096.28, score=53.1]; C2H2-type zinc finger [PF13894.8, score=37.1]} {Human: ENSG00000147596, PRDM14, PR/SET domain 14, [RH, Score=289, Expect=2e-89]} {Mouse: ENSMUSG00000042414, Prdm14, PR domain containing 14, [RH, Score=278, Expect=2e-85]} {Dmel: FBgn0266450, Kr-h1, Kruppel homolog 1, [Score=120, Expect=4e-28]} {Celegans: WBGene00018567, F47E1.3, [RH, Score=275, Expect=6e-84]} {Smed: dd_Smed_v6_36618_0_1, dd_Smed_v6_36618_0_1, [RH, Score=277, Expect=2e-90]} {RNA1310_74120}
2.	MligTC455_06923	8	0.17	Mlig455_069852	Neo: - Age: -		0.995	-	-	-	-	-	0.995	Mlig455_069852 {REF} {Length: 889} {NoTransDecoderORF}
3.	MligTC455_52571	122	2.54	Mlig455_019376, Mlig455_019599	Neo: - Age: Down-Up-Up		0.99	-	-	0.990	-	-	-	Mlig455_019376 {REF} {Length: 2305} {NoTransDecoderORF} {RNA1509_52124} {RNA1310_34899, RNA1509_52124} {RNA1509_52124, RNA815_4169} Mlig455_019599 {REF} {Length: 785} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_52124} {RNA1310_34899} {RNA815_4169}
4.	MligTC455_12900	29	0.6	Mlig455_027668	Neo: - Age: -		0.988	-	-	0.988	-	-	-	Mlig455_027668 {REF} {Length: 1792} {NoTransDecoderORF} {RNA1509_41695} {RNA1310_58090} {RNA815_19385}
5.	MligTC455_08610	14	0.29	Mlig455_029836	Neo: - Age: - Regeneration-downregulated R2: -6.450 Regeneration-depleted R2: -6.450		0.981	-	-	0.981	-	-	-	Mlig455_029836 {REF} {Length: 1637} {NoTransDecoderORF} {RNA1509_5312} {RNA1310_99996} {RNA815_25433}
6.	MligTC455_04239	36	0.74	Mlig455_059979	Neo: - Age: logFC(26M/2M)=-0.830	HTR1A	0.975	-	-	0.975	-	-	-	Mlig455_059979 {REF} {Length: 2072} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=248.4]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=39.0]} {Human: ENSG00000178394, HTR1A, 5-hydroxytryptamine receptor 1A, [RH, Score=276, Expect=1e-88]} {Mouse: ENSMUSG00000021721, Htr1a, 5-hydroxytryptamine (serotonin) receptor 1A, [RH, Score=275, Expect=2e-88]} {Dmel: FBgn0004168, 5-HT1A, 5-hydroxytryptamine (serotonin) receptor 1A, [RH, Score=225, Expect=7e-66]} {Celegans: WBGene00004779, ser-4, SERotonin/octopamine receptor family; Serotonin receptor, [RH, Score=243, Expect=5e-76]} {Smed: dd_Smed_v6_21060_0_1, dd_Smed_v6_21060_0_1, [RH, Score=292, Expect=3e-95]} {RNA1310_35750} {RNA815_49463}
7.	MligTC455_19330	68	1.41	Mlig455_037875	Neo: - Age: Up-Down-Down Region-enriched R2: 3.365/0.04049	PCDH9	0.974	-	-	-	-	-	0.974	Mlig455_037875 {REF} {Length: 4542} {Pfam: Cadherin domain [PF00028.19, score=236.0]; Cadherin-like [PF16184.7, score=26.7]; Cadherin-like [PF08266.14, score=21.4]} {Human: ENSG00000184226, PCDH9, protocadherin 9, [Score=229, Expect=5e-61]; ENSG00000156453, PCDH1, protocadherin 1, [Score=221, Expect=3e-58]} {Mouse: ENSMUSG00000055421, Pcdh9, protocadherin 9, [Score=228, Expect=6e-61]; ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=222, Expect=4e-59]} {Dmel: FBgn0024836, stan, starry night, [Score=210, Expect=7e-55]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=171, Expect=1e-42]} {Smed: dd_Smed_v6_14613_0_1, dd_Smed_v6_14613_0_1, [RH, Score=301, Expect=2e-86]} {RNA1310_8932} {RNA815_18391}
8.	MligTC455_11862	13	0.26	Mlig455_024721	Neo: - Age: -	DLG4	0.973	-	-	-	-	-	0.973	Mlig455_024721 {REF} {Length: 1968} {Pfam: PDZ domain [PF00595.26, score=63.1]; PDZ domain [PF17820.3, score=49.6]; PDZ domain [PF13180.8, score=31.6]} {Human: ENSG00000132535, DLG4, discs large MAGUK scaffold protein 4, [Score=71.6, Expect=6e-14]; ENSG00000132849, PATJ, PATJ, crumbs cell polarity complex component, [Score=68.9, Expect=3e-12]} {Mouse: ENSMUSG00000016520, Lnx2, ligand of numb-protein X 2, [Score=71.6, Expect=2e-13]; ENSMUSG00000020886, Dlg4, discs large MAGUK scaffold protein 4, [Score=70.9, Expect=7e-14]} {Dmel: FBgn0263289, scrib, scribbled, [Score=69.7, Expect=7e-13]} {Celegans: WBGene00001006, dlg-1, Drosophila Discs LarGe homolog; MAGUK protein DLG-1; SAP97-like protein DLG-1, [Score=55.8, Expect=2e-08]} {Smed: dd_Smed_v6_8994_0_1, dd_Smed_v6_8994_0_1, [Score=104, Expect=7e-25]} {RNA1509_45931} {RNA1310_25435.2} {RNA815_1460.1}
9.	MligTC455_21499	40	0.83	Mlig455_020553, Mlig455_044503	Neo: - Age: Up-Down-Down Region-enriched R4: 4.133/0.00807	GRIK2	0.973	-	-	0.973	-	-	-	Mlig455_020553 {REF} {Length: 3023} {Pfam: Ligand-gated ion channel [PF00060.28, score=65.6]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=47.4]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=35.5]} {Human: ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=122, Expect=1e-27]} {Mouse: ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=122, Expect=7e-28]} {Dmel: FBgn0004620, GluRIIA, Glutamate receptor IIA, [Score=122, Expect=5e-28]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=116, Expect=1e-26]} {Smed: dd_Smed_v6_17503_0_1, dd_Smed_v6_17503_0_1, [Score=157, Expect=6e-41]} {RNA1310_56126} {RNA815_40955} Mlig455_044503 {REF} {Length: 1339} {Pfam: Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=28.3]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=23.7]} {RNA1310_56126} {RNA815_40955}
10.	MligTC455_21555	70	1.46	Mlig455_014351	Neo: - Age: -		0.967	-	-	0.967	-	-	-	Mlig455_014351 {REF} {Length: 4507} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=69.9]} {RNA1509_41009} {RNA1310_68932} {RNA815_36459}
11.	MligTC455_47068	69	1.43	Mlig455_060910	Neo: - Age: -		0.966	-	-	0.966	-	-	-	Mlig455_060910 {REF} {Length: 1012}
12.	MligTC455_50990	120	2.5	Mlig455_062680	Neo: - Age: -		0.964	-	-	0.964	-	-	-	Mlig455_062680 {REF} {Length: 1289} {RNA1509_19235} {RNA1310_6372.2} {RNA815_3528}
13.	MligTC455_40482	206	4.3	Mlig455_035109, Mlig455_062419	Neo: - Age: -		0.963	-	-	-	-	-	0.963	Mlig455_035109 {REF} {Length: 1527} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=20.2]} {RNA1509_41958} {RNA1310_29720, RNA1509_41958} {RNA1509_41958, RNA815_13581.1} Mlig455_062419 {REF} {Length: 1210} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=20.4]} {RNA1509_41958} {RNA1310_29720} {RNA815_13581.1}
14.	MligTC455_13658	26	0.53	Mlig455_063501	Neo: - Age: -		0.961	-	-	0.961	-	-	-	Mlig455_063501 {REF} {Length: 1954} {RNA1310_18636.2} {RNA815_32755}
15.	MligTC455_31358	44	0.93	Mlig455_004030	Neo: - Age: -		0.958	-	-	0.958	-	-	-	Mlig455_004030 {REF} {Length: 411} {RNA1310_28000.1} {RNA815_53200}
16.	MligTC455_15803	191	3.98	Mlig455_039323	Neo: - Age: -	RGS12	0.957	-	-	0.957	-	-	-	Mlig455_039323 {REF} {Length: 3633} {TRANSSPLICED} {Pfam: Regulator of G protein signaling domain [PF00615.21, score=106.4]; PDZ domain [PF00595.26, score=54.0]; PDZ domain [PF17820.3, score=47.7]; Raf-like Ras-binding domain [PF02196.17, score=45.1]; PDZ domain [PF13180.8, score=21.4]} {Human: ENSG00000159788, RGS12, regulator of G protein signaling 12, [RH, Score=183, Expect=2e-47]} {Mouse: ENSMUSG00000029101, Rgs12, regulator of G-protein signaling 12, [RH, Score=186, Expect=3e-48]} {Dmel: FBgn0020278, loco, locomotion defects, [Score=147, Expect=6e-36]} {Celegans: WBGene00004345, rgs-2, Regulator of G-protein signaling rgs-2, [Score=99.4, Expect=6e-24]} {Smed: dd_Smed_v6_8463_0_2, dd_Smed_v6_8463_0_2, [Score=105, Expect=2e-24]} {RNA1509_57496} {RNA1310_5606} {RNA815_31965}
17.	MligTC455_27278	107	2.22	Mlig455_060500	Neo: - Age: -		0.957	-	-	0.957	-	-	-	Mlig455_060500 {REF} {Length: 3722} {TRANSSPLICED} {Pfam: FAD dependent oxidoreductase [PF01266.26, score=181.3]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=25.1]; FAD binding domain [PF01494.21, score=21.4]} {Smed: dd_Smed_v6_5776_0_1, dd_Smed_v6_5776_0_1, [Score=238, Expect=3e-75]} {RNA1509_28366} {RNA1310_19914} {RNA815_11518}
18.	MligTC455_48854	40	0.84	Mlig455_013153	Neo: - Age: -		0.956	-	-	-	-	-	0.956	Mlig455_013153 {REF} {Length: 1966} {RNA1310_80422} {RNA815_52233}
19.	MligTC455_24244	290	6.04	Mlig455_062623, Mlig455_067528, Mlig455_070336	Neo: - Age: Down-Up-Down Region-enriched R2: 6.603/0.00020		0.954	-	-	-	-	-	0.954	Mlig455_062623 {REF} {Length: 1154} {Pfam: Putative Interleukin 2 receptor, gamma chain [PF15874.7, score=68.1]} {Smed: dd_Smed_v6_15167_0_1, dd_Smed_v6_15167_0_1, [RH, Score=71.6, Expect=3e-16]} {RNA1310_40891} {RNA815_16565} Mlig455_067528 {REF} {Length: 1190} {Pfam: Putative Interleukin 2 receptor, gamma chain [PF15874.7, score=67.0]} {Smed: dd_Smed_v6_15167_0_1, dd_Smed_v6_15167_0_1, [RH, Score=72.4, Expect=1e-16]} {RNA1310_40891} {RNA815_16565} Mlig455_070336 {REF} {Length: 859} {Pfam: Putative Interleukin 2 receptor, gamma chain [PF15874.7, score=67.7]} {Smed: dd_Smed_v6_15167_0_1, dd_Smed_v6_15167_0_1, [Score=57.4, Expect=1e-10]} {RNA1310_40891} {RNA815_16565}
20.	MligTC455_22973	69	1.43	Mlig455_035875, Mlig455_035912, Mlig455_035913	Neo: - Age: -		0.953	-	-	0.953	-	-	-	Mlig455_035875 {REF} {Length: 3712} {NoTransDecoderORF} {RNA1310_130183} {RNA815_30776} Mlig455_035912 {REF} {Length: 1408} {NoTransDecoderORF} {RNA1310_102146} {RNA815_30776} Mlig455_035913 {REF} {Length: 776} {NoTransDecoderORF} {RNA1310_29036.3}
21.	MligTC455_40481	110	2.28	Mlig455_009942	Neo: - Age: -		0.953	-	-	-	-	-	0.953	Mlig455_009942 {REF} {Length: 2365} {Pfam: emp24/gp25L/p24 family/GOLD [PF01105.26, score=57.8]} {RNA1509_41958} {RNA1310_23710} {RNA815_10791}
22.	MligTC455_51717	52	1.08	Mlig455_001880	Neo: - Age: Down-Up-Up		0.952	-	-	0.952	-	-	-	Mlig455_001880 {REF} {Length: 1251} {TRANSSPLICED} {RNA1310_62660} {RNA815_37836}